RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 HMMRO75330 724 aa8.26□□□□□ -1.09
ATG4A-207ENST00000474825 RABL6Q3YEC7 729 aaPredicted RBP8.26□□□□□ -1.09
ATG4A-207ENST00000474825 HSP90AB3PQ58FF7 597 aa8.26□□□□□ -1.09
ATG4A-207ENST00000474825 MICALL2Q8IY33 904 aa8.26□□□□□ -1.09
ATG4A-207ENST00000474825 LINC00116Q8NCU8 138 aa8.26□□□□□ -1.09
ATG4A-207ENST00000474825 NOP58Q9Y2X3 529 aaKnown RBP8.26□□□□□ -1.09
ATG4A-207ENST00000474825 LRRFIP2Q9Y608 721 aaKnown RBP8.26□□□□□ -1.09
ATG4A-207ENST00000474825 SBF2Q86WG5 1849 aa8.26□□□□□ -1.09
ATG4A-207ENST00000474825 ARFGEF2Q9Y6D5 1785 aa8.25□□□□□ -1.09
ATG4A-207ENST00000474825 BTAF1O14981 1849 aa8.25□□□□□ -1.09
ATG4A-207ENST00000474825 PNMA6EA0A0J9YXQ4 647 aa8.25□□□□□ -1.09
ATG4A-207ENST00000474825 RPS6KA4O75676 772 aa8.25□□□□□ -1.09
ATG4A-207ENST00000474825 CAMTA2O94983 1202 aa8.25□□□□□ -1.09
ATG4A-207ENST00000474825 HMGB2P26583 209 aaKnown RBP8.25□□□□□ -1.09
ATG4A-207ENST00000474825 SLC27A3Q5K4L6 730 aa8.25□□□□□ -1.09
ATG4A-207ENST00000474825 FAM182BQ5T319 152 aa8.25□□□□□ -1.09
ATG4A-207ENST00000474825 KIF6Q6ZMV9 814 aa8.25□□□□□ -1.09
ATG4A-207ENST00000474825 ZNF34Q8IZ26 560 aa8.25□□□□□ -1.09
ATG4A-207ENST00000474825 SUCLG2Q96I99 432 aa8.25□□□□□ -1.09
ATG4A-207ENST00000474825 PLA2G12BQ9BX93 195 aa8.25□□□□□ -1.09
ATG4A-207ENST00000474825 CWC25Q9NXE8 425 aaPredicted RBP8.25□□□□□ -1.09
ATG4A-207ENST00000474825 C9orf78Q9NZ63 289 aaPredicted RBP8.25□□□□□ -1.09
ATG4A-207ENST00000474825 LY75O60449 1722 aa8.25□□□□□ -1.09
ATG4A-207ENST00000474825 A0A087WZG4 1122 aa8.24□□□□□ -1.09
ATG4A-207ENST00000474825 PLSCR1O15162 318 aa8.24□□□□□ -1.09
ATG4A-207ENST00000474825 PDE4AP27815 886 aa8.24□□□□□ -1.09
ATG4A-207ENST00000474825 EN1Q05925 392 aaPredicted RBP8.24□□□□□ -1.09
ATG4A-207ENST00000474825 HLFQ16534 295 aa8.24□□□□□ -1.09
ATG4A-207ENST00000474825 CLEC4GQ6UXB4 293 aa8.24□□□□□ -1.09
ATG4A-207ENST00000474825 PPP1R42Q7Z4L9 355 aa8.24□□□□□ -1.09
ATG4A-207ENST00000474825 CHD1LQ86WJ1 897 aa8.24□□□□□ -1.09
ATG4A-207ENST00000474825 DZIP3Q86Y13 1208 aaKnown RBP8.24□□□□□ -1.09
ATG4A-207ENST00000474825 ZBTB3Q9H5J0 574 aa8.24□□□□□ -1.09
ATG4A-207ENST00000474825 MYH14Q7Z406 1995 aaKnown RBP8.24□□□□□ -1.09
ATG4A-207ENST00000474825 ATP5J2-PTCD1G3V325 749 aa8.23□□□□□ -1.09
ATG4A-207ENST00000474825 RAB11FIP3O75154 756 aa8.23□□□□□ -1.09
ATG4A-207ENST00000474825 TRIM37O94972 964 aa8.23□□□□□ -1.09
ATG4A-207ENST00000474825 APBA3O96018 575 aa8.23□□□□□ -1.09
ATG4A-207ENST00000474825 PCCAP05165 728 aaPredicted RBP8.23□□□□□ -1.09
ATG4A-207ENST00000474825 FOXO4P98177 505 aa8.23□□□□□ -1.09
ATG4A-207ENST00000474825 EPHA10Q5JZY3 1008 aa8.23□□□□□ -1.09
ATG4A-207ENST00000474825 NLRP10Q86W26 655 aa8.23□□□□□ -1.09
ATG4A-207ENST00000474825 EFCAB3Q8N7B9 438 aa8.23□□□□□ -1.09
ATG4A-207ENST00000474825 LRRC4BQ9NT99 713 aa8.23□□□□□ -1.09
ATG4A-207ENST00000474825 CCNL1Q9UK58 526 aaPredicted RBP8.23□□□□□ -1.09
ATG4A-207ENST00000474825 SALL3Q9BXA9 1300 aa8.23□□□□□ -1.09
ATG4A-207ENST00000474825 CDHR2Q9BYE9 1310 aa8.23□□□□□ -1.09
ATG4A-207ENST00000474825 SRGAP3O43295 1099 aa8.22□□□□□ -1.09
ATG4A-207ENST00000474825 CSF1RP07333 972 aa8.22□□□□□ -1.09
ATG4A-207ENST00000474825 RFX5P48382 616 aaPredicted RBP8.22□□□□□ -1.09
ATG4A-207ENST00000474825 HSP90AB4PQ58FF6 505 aa8.22□□□□□ -1.09
ATG4A-207ENST00000474825 ANKRD45Q5TZF3 282 aa8.22□□□□□ -1.09
ATG4A-207ENST00000474825 SKAP1Q86WV1 359 aa8.22□□□□□ -1.09
ATG4A-207ENST00000474825 ZBTB38Q8NAP3 1195 aaPredicted RBP8.22□□□□□ -1.09
ATG4A-207ENST00000474825 AK7Q96M32 723 aa8.22□□□□□ -1.09
ATG4A-207ENST00000474825 OSBPL3Q9H4L5 887 aa8.22□□□□□ -1.09
ATG4A-207ENST00000474825 BICC1Q9H694 974 aaKnown RBP8.22□□□□□ -1.09
ATG4A-207ENST00000474825 COPRSQ9NQ92 184 aa8.22□□□□□ -1.09
ATG4A-207ENST00000474825 TBC1D2BQ9UPU7 963 aa8.22□□□□□ -1.09
ATG4A-207ENST00000474825 LSM11P83369 360 aaKnown RBP eCLIP8.21□□□□□ -1.1
ATG4A-207ENST00000474825 PARP10Q53GL7 1025 aa8.21□□□□□ -1.1
ATG4A-207ENST00000474825 UBE3BQ7Z3V4 1068 aa8.21□□□□□ -1.1
ATG4A-207ENST00000474825 BCL2L12Q9HB09 334 aa8.21□□□□□ -1.1
ATG4A-207ENST00000474825 TSHZ2Q9NRE2 1034 aa8.21□□□□□ -1.1
ATG4A-207ENST00000474825 NARFQ9UHQ1 456 aa8.21□□□□□ -1.1
ATG4A-207ENST00000474825 UBN2Q6ZU65 1347 aa8.21□□□□□ -1.1
ATG4A-207ENST00000474825 PTPN12Q05209 780 aaKnown RBP8.2□□□□□ -1.1
ATG4A-207ENST00000474825 EZH2Q15910 746 aaKnown RBP8.2□□□□□ -1.1
ATG4A-207ENST00000474825 NPM2Q86SE8 214 aaKnown RBP8.2□□□□□ -1.1
ATG4A-207ENST00000474825 SPOCK2Q92563 424 aa8.2□□□□□ -1.1
ATG4A-207ENST00000474825 KIF1BPQ96EK5 621 aa8.2□□□□□ -1.1
ATG4A-207ENST00000474825 BACH2Q9BYV9 841 aa8.2□□□□□ -1.1
ATG4A-207ENST00000474825 LRRCC1Q9C099 1032 aa8.2□□□□□ -1.1
ATG4A-207ENST00000474825 LNPKQ9C0E8 428 aa8.2□□□□□ -1.1
ATG4A-207ENST00000474825 STAP2Q9UGK3 403 aa8.2□□□□□ -1.1
ATG4A-207ENST00000474825 CIZ1Q9ULV3 898 aaPredicted RBP8.2□□□□□ -1.1
ATG4A-207ENST00000474825 RTCBQ9Y3I0 505 aaKnown RBP8.2□□□□□ -1.1
ATG4A-207ENST00000474825 KAT6BQ8WYB5 2073 aa8.2□□□□□ -1.1
ATG4A-207ENST00000474825 PSDA5PKW4 1024 aaPredicted RBP8.19□□□□□ -1.1
ATG4A-207ENST00000474825 NTSR2O95665 410 aa8.19□□□□□ -1.1
ATG4A-207ENST00000474825 SSFA2P28290 1259 aa8.19□□□□□ -1.1
ATG4A-207ENST00000474825 KCNQ4P56696 695 aa8.19□□□□□ -1.1
ATG4A-207ENST00000474825 TXNRD1Q16881 649 aa8.19□□□□□ -1.1
ATG4A-207ENST00000474825 C8orf34Q49A92 452 aa8.19□□□□□ -1.1
ATG4A-207ENST00000474825 BMP2KLQ5H9B9 411 aa8.19□□□□□ -1.1
ATG4A-207ENST00000474825 AMIGO3Q86WK7 504 aa8.19□□□□□ -1.1
ATG4A-207ENST00000474825 ERC1Q8IUD2 1116 aa8.19□□□□□ -1.1
ATG4A-207ENST00000474825 PLEKHM2Q8IWE5 1019 aa8.19□□□□□ -1.1
ATG4A-207ENST00000474825 ARHGEF1Q92888 912 aaKnown RBP8.19□□□□□ -1.1
ATG4A-207ENST00000474825 CAMKK2Q96RR4 588 aa8.19□□□□□ -1.1
ATG4A-207ENST00000474825 EXOC6BQ9Y2D4 811 aa8.19□□□□□ -1.1
ATG4A-207ENST00000474825 ZNF652Q9Y2D9 606 aa8.19□□□□□ -1.1
ATG4A-207ENST00000474825 C4BP0C0L5 1744 aa8.19□□□□□ -1.1
ATG4A-207ENST00000474825 USP42Q9H9J4 1324 aaKnown RBP8.19□□□□□ -1.1
ATG4A-207ENST00000474825 TAF1LQ8IZX4 1826 aa8.19□□□□□ -1.1
ATG4A-207ENST00000474825 ANKRD36CQ5JPF3 1778 aa8.18□□□□□ -1.1
ATG4A-207ENST00000474825 BCORQ6W2J9 1755 aa8.18□□□□□ -1.1
ATG4A-207ENST00000474825 GNPATO15228 680 aa8.18□□□□□ -1.1
ATG4A-207ENST00000474825 SURF6O75683 361 aaKnown RBP8.18□□□□□ -1.1
ATG4A-207ENST00000474825 SASH1O94885 1247 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms