RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 INTS5Q6P9B9 1019 aaKnown RBP2.16□□□□□ -2.06
HDAC9-222ENST00000474742 HFE2Q6ZVN8 426 aa2.16□□□□□ -2.06
HDAC9-222ENST00000474742 ALDH16A1Q8IZ83 802 aa2.16□□□□□ -2.06
HDAC9-222ENST00000474742 CEP41Q9BYV8 373 aa2.16□□□□□ -2.06
HDAC9-222ENST00000474742 SMG9Q9H0W8 520 aaKnown RBP2.16□□□□□ -2.06
HDAC9-222ENST00000474742 TFIP11Q9UBB9 837 aaKnown RBP2.16□□□□□ -2.06
HDAC9-222ENST00000474742 KIAA1024Q9UPX6 916 aa2.16□□□□□ -2.06
HDAC9-222ENST00000474742 PALM3A6NDB9 673 aaPredicted RBP2.15□□□□□ -2.07
HDAC9-222ENST00000474742 FAM177BA6PVY3 158 aa2.15□□□□□ -2.07
HDAC9-222ENST00000474742 USP17L5A8MUK1 530 aa2.15□□□□□ -2.07
HDAC9-222ENST00000474742 WNT11O96014 354 aa2.15□□□□□ -2.07
HDAC9-222ENST00000474742 TGFB1P01137 390 aa2.15□□□□□ -2.07
HDAC9-222ENST00000474742 GHRHP01286 108 aa2.15□□□□□ -2.07
HDAC9-222ENST00000474742 RARAP10276 462 aa2.15□□□□□ -2.07
HDAC9-222ENST00000474742 SRPK2P78362 688 aaKnown RBP2.15□□□□□ -2.07
HDAC9-222ENST00000474742 CFAP70Q5T0N1 1121 aa2.15□□□□□ -2.07
HDAC9-222ENST00000474742 LCE1DQ5T752 114 aa2.15□□□□□ -2.07
HDAC9-222ENST00000474742 KANK4Q5T7N3 995 aaPredicted RBP2.15□□□□□ -2.07
HDAC9-222ENST00000474742 CCDC102BQ68D86 513 aa2.15□□□□□ -2.07
HDAC9-222ENST00000474742 DHX32Q7L7V1 743 aaKnown RBP2.15□□□□□ -2.07
HDAC9-222ENST00000474742 IL22RA1Q8N6P7 574 aa2.15□□□□□ -2.07
HDAC9-222ENST00000474742 GSX2Q9BZM3 304 aa2.15□□□□□ -2.07
HDAC9-222ENST00000474742 ZMYND15Q9H091 742 aa2.15□□□□□ -2.07
HDAC9-222ENST00000474742 TSPAN10Q9H1Z9 355 aaPredicted RBP2.15□□□□□ -2.07
HDAC9-222ENST00000474742 KCNF1Q9H3M0 494 aa2.15□□□□□ -2.07
HDAC9-222ENST00000474742 FRRS1LQ9P0K9 344 aa2.15□□□□□ -2.07
HDAC9-222ENST00000474742 ANGEL1Q9UNK9 670 aaKnown RBP2.15□□□□□ -2.07
HDAC9-222ENST00000474742 USP17L3A6NCW0 530 aa2.14□□□□□ -2.07
HDAC9-222ENST00000474742 USP17L4A6NCW7 530 aa2.14□□□□□ -2.07
HDAC9-222ENST00000474742 ARID3CA6NKF2 412 aa2.14□□□□□ -2.07
HDAC9-222ENST00000474742 F8W735 103 aaPredicted RBP2.14□□□□□ -2.07
HDAC9-222ENST00000474742 DLL1O00548 723 aa2.14□□□□□ -2.07
HDAC9-222ENST00000474742 SART1O43290 800 aaKnown RBP2.14□□□□□ -2.07
HDAC9-222ENST00000474742 ATP9BO43861 1147 aa2.14□□□□□ -2.07
HDAC9-222ENST00000474742 SASH3O75995 380 aa2.14□□□□□ -2.07
HDAC9-222ENST00000474742 PSAPP07602 524 aa2.14□□□□□ -2.07
HDAC9-222ENST00000474742 EPHA4P54764 986 aa2.14□□□□□ -2.07
HDAC9-222ENST00000474742 CRTC2Q53ET0 693 aaPredicted RBP2.14□□□□□ -2.07
HDAC9-222ENST00000474742 USP17L2Q6R6M4 530 aa2.14□□□□□ -2.07
HDAC9-222ENST00000474742 USP17L1Q7RTZ2 530 aa2.14□□□□□ -2.07
HDAC9-222ENST00000474742 MAP4K3Q8IVH8 894 aa2.14□□□□□ -2.07
HDAC9-222ENST00000474742 PLEKHM2Q8IWE5 1019 aa2.14□□□□□ -2.07
HDAC9-222ENST00000474742 DZIP1LQ8IYY4 767 aaKnown RBP2.14□□□□□ -2.07
HDAC9-222ENST00000474742 AGGF1Q8N302 714 aaeCLIP2.14□□□□□ -2.07
HDAC9-222ENST00000474742 TSEN2Q8NCE0 465 aaKnown RBP2.14□□□□□ -2.07
HDAC9-222ENST00000474742 NFATC2IPQ8NCF5 419 aa2.14□□□□□ -2.07
HDAC9-222ENST00000474742 GIMAP7Q8NHV1 300 aa2.14□□□□□ -2.07
HDAC9-222ENST00000474742 GAS2L2Q8NHY3 880 aa2.14□□□□□ -2.07
HDAC9-222ENST00000474742 C7orf43Q8WVR3 580 aa2.14□□□□□ -2.07
HDAC9-222ENST00000474742 SCG3Q8WXD2 468 aaKnown RBP2.14□□□□□ -2.07
HDAC9-222ENST00000474742 UTP4Q969X6 686 aaKnown RBP2.14□□□□□ -2.07
HDAC9-222ENST00000474742 VTI1AQ96AJ9 217 aa2.14□□□□□ -2.07
HDAC9-222ENST00000474742 PLD4Q96BZ4 506 aa2.14□□□□□ -2.07
HDAC9-222ENST00000474742 ZNF594Q96JF6 807 aaPredicted RBP2.14□□□□□ -2.07
HDAC9-222ENST00000474742 HINFPQ9BQA5 517 aa2.14□□□□□ -2.07
HDAC9-222ENST00000474742 LPIN3Q9BQK8 851 aa2.14□□□□□ -2.07
HDAC9-222ENST00000474742 KRTAP4-7Q9BYR0 210 aa2.14□□□□□ -2.07
HDAC9-222ENST00000474742 PPP1R12CQ9BZL4 782 aa2.14□□□□□ -2.07
HDAC9-222ENST00000474742 SRA1Q9HD15 236 aaKnown RBP2.14□□□□□ -2.07
HDAC9-222ENST00000474742 MAFBQ9Y5Q3 323 aaPredicted RBP2.14□□□□□ -2.07
HDAC9-222ENST00000474742 ATAD2Q6PL18 1390 aa2.13□□□□□ -2.07
HDAC9-222ENST00000474742 KIAA1324LA8MWY0 1029 aaPredicted RBP2.13□□□□□ -2.07
HDAC9-222ENST00000474742 TGFBR3LH3BV60 316 aa2.13□□□□□ -2.07
HDAC9-222ENST00000474742 DEAF1O75398 565 aaPredicted RBP2.13□□□□□ -2.07
HDAC9-222ENST00000474742 LGR5O75473 907 aa2.13□□□□□ -2.07
HDAC9-222ENST00000474742 MAP3K6O95382 1288 aa2.13□□□□□ -2.07
HDAC9-222ENST00000474742 MED26O95402 600 aa2.13□□□□□ -2.07
HDAC9-222ENST00000474742 RASA1P20936 1047 aa2.13□□□□□ -2.07
HDAC9-222ENST00000474742 TARSP26639 723 aaKnown RBP2.13□□□□□ -2.07
HDAC9-222ENST00000474742 CDC25BP30305 580 aa2.13□□□□□ -2.07
HDAC9-222ENST00000474742 IDH3AP50213 366 aa2.13□□□□□ -2.07
HDAC9-222ENST00000474742 ARSDP51689 593 aa2.13□□□□□ -2.07
HDAC9-222ENST00000474742 HIRAP54198 1017 aaPredicted RBP2.13□□□□□ -2.07
HDAC9-222ENST00000474742 NFIAQ12857 509 aa2.13□□□□□ -2.07
HDAC9-222ENST00000474742 GRIK5Q16478 980 aa2.13□□□□□ -2.07
HDAC9-222ENST00000474742 FAM117BQ6P1L5 589 aa2.13□□□□□ -2.07
HDAC9-222ENST00000474742 ACAD11Q709F0 780 aa2.13□□□□□ -2.07
HDAC9-222ENST00000474742 TMEM130Q8N3G9 435 aa2.13□□□□□ -2.07
HDAC9-222ENST00000474742 TTC9Q92623 222 aa2.13□□□□□ -2.07
HDAC9-222ENST00000474742 ASIC4Q96FT7 647 aa2.13□□□□□ -2.07
HDAC9-222ENST00000474742 ARXQ96QS3 562 aa2.13□□□□□ -2.07
HDAC9-222ENST00000474742 DBNDD2Q9BQY9 259 aa2.13□□□□□ -2.07
HDAC9-222ENST00000474742 MUC3BQ9H195 1237 aa2.13□□□□□ -2.07
HDAC9-222ENST00000474742 ATG3Q9NT62 314 aa2.13□□□□□ -2.07
HDAC9-222ENST00000474742 MKRN1Q9UHC7 482 aaKnown RBP2.13□□□□□ -2.07
HDAC9-222ENST00000474742 TIMELESSQ9UNS1 1208 aa2.13□□□□□ -2.07
HDAC9-222ENST00000474742 LOC102724428A0A0B4J2F2 783 aa2.12□□□□□ -2.07
HDAC9-222ENST00000474742 HMX2A2RU54 273 aa2.12□□□□□ -2.07
HDAC9-222ENST00000474742 WDR64B1ANS9 1081 aa2.12□□□□□ -2.07
HDAC9-222ENST00000474742 ZBTB42B2RXF5 422 aa2.12□□□□□ -2.07
HDAC9-222ENST00000474742 J3QW42 95 aa2.12□□□□□ -2.07
HDAC9-222ENST00000474742 C21orf2O43822 256 aa2.12□□□□□ -2.07
HDAC9-222ENST00000474742 RXRBP28702 533 aa2.12□□□□□ -2.07
HDAC9-222ENST00000474742 LMOD1P29536 600 aaPredicted RBP2.12□□□□□ -2.07
HDAC9-222ENST00000474742 NRLP54845 237 aa2.12□□□□□ -2.07
HDAC9-222ENST00000474742 SIK1P57059 783 aa2.12□□□□□ -2.07
HDAC9-222ENST00000474742 GPLD1P80108 840 aa2.12□□□□□ -2.07
HDAC9-222ENST00000474742 PLAURQ03405 335 aa2.12□□□□□ -2.07
HDAC9-222ENST00000474742 PTK7Q13308 1070 aa2.12□□□□□ -2.07
HDAC9-222ENST00000474742 DGKZQ13574 1117 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms