RNA–Protein interactions for RNA: ENST00000474438.1

CDH22-202, Transcript of cadherin 22, humanhuman

TSL 1 (best)

Gene CDH22, Length 1,640 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH22-202ENST00000474438 COL24A1Q17RW2 1714 aa27.7■■■□□ 2.03
CDH22-202ENST00000474438 SKAP1Q86WV1 359 aa27.7■■■□□ 2.02
CDH22-202ENST00000474438 IFIT5Q13325 482 aaKnown RBP27.69■■■□□ 2.02
CDH22-202ENST00000474438 KLHDC4Q8TBB5 520 aa27.69■■■□□ 2.02
CDH22-202ENST00000474438 CCDC85AQ96PX6 553 aaPredicted RBP27.69■■■□□ 2.02
CDH22-202ENST00000474438 LNPKQ9C0E8 428 aa27.69■■■□□ 2.02
CDH22-202ENST00000474438 POLRMTO00411 1230 aaKnown RBP27.68■■■□□ 2.02
CDH22-202ENST00000474438 G3BP1Q13283 466 aaKnown RBP eCLIP27.68■■■□□ 2.02
CDH22-202ENST00000474438 FAM161AQ3B820 660 aa27.68■■■□□ 2.02
CDH22-202ENST00000474438 CNBD1Q8NA66 436 aa27.68■■■□□ 2.02
CDH22-202ENST00000474438 LRRCC1Q9C099 1032 aa27.68■■■□□ 2.02
CDH22-202ENST00000474438 GREM2Q9H772 168 aa27.68■■■□□ 2.02
CDH22-202ENST00000474438 DDR1Q08345 913 aa27.67■■■□□ 2.02
CDH22-202ENST00000474438 OS9Q13438 667 aaPredicted RBP27.67■■■□□ 2.02
CDH22-202ENST00000474438 ITGA6P23229 1130 aa27.67■■■□□ 2.02
CDH22-202ENST00000474438 CCDC152Q4G0S7 254 aa27.67■■■□□ 2.02
CDH22-202ENST00000474438 ERC1Q8IUD2 1116 aa27.67■■■□□ 2.02
CDH22-202ENST00000474438 SIL1Q9H173 461 aa27.67■■■□□ 2.02
CDH22-202ENST00000474438 QSER1Q2KHR3 1735 aa27.66■■■□□ 2.02
CDH22-202ENST00000474438 ABCC12Q96J65 1359 aa27.66■■■□□ 2.02
CDH22-202ENST00000474438 ANKRD18BA2A2Z9 1011 aa27.66■■■□□ 2.02
CDH22-202ENST00000474438 PRR5LQ6MZQ0 368 aa27.66■■■□□ 2.02
CDH22-202ENST00000474438 KIF1BPQ96EK5 621 aa27.66■■■□□ 2.02
CDH22-202ENST00000474438 NLRP3Q96P20 1036 aa27.66■■■□□ 2.02
CDH22-202ENST00000474438 SMARCA5O60264 1052 aaPredicted RBP27.65■■■□□ 2.02
CDH22-202ENST00000474438 SF3B3Q15393 1217 aaKnown RBP27.65■■■□□ 2.02
CDH22-202ENST00000474438 RHPN1Q8TCX5 695 aa27.65■■■□□ 2.02
CDH22-202ENST00000474438 MSL1Q68DK7 614 aa27.64■■■□□ 2.02
CDH22-202ENST00000474438 CCDC24Q8N4L8 307 aa27.64■■■□□ 2.02
CDH22-202ENST00000474438 MMP10P09238 476 aa27.63■■■□□ 2.01
CDH22-202ENST00000474438 RGS3P49796 1198 aa27.63■■■□□ 2.01
CDH22-202ENST00000474438 ST5P78524 1137 aa27.63■■■□□ 2.01
CDH22-202ENST00000474438 TAF7LQ5H9L4 462 aa27.63■■■□□ 2.01
CDH22-202ENST00000474438 ZNF594Q96JF6 807 aaPredicted RBP27.63■■■□□ 2.01
CDH22-202ENST00000474438 PARP3Q9Y6F1 533 aa27.63■■■□□ 2.01
CDH22-202ENST00000474438 DDX60Q8IY21 1712 aaKnown RBP27.63■■■□□ 2.01
CDH22-202ENST00000474438 PDE4AP27815 886 aa27.63■■■□□ 2.01
CDH22-202ENST00000474438 C3orf67Q6ZVT6 689 aa27.62■■■□□ 2.01
CDH22-202ENST00000474438 SLC16A10Q8TF71 515 aa27.62■■■□□ 2.01
CDH22-202ENST00000474438 FBXO3Q9UK99 471 aa27.62■■■□□ 2.01
CDH22-202ENST00000474438 RTL9Q8NET4 1388 aa27.62■■■□□ 2.01
CDH22-202ENST00000474438 PELP1Q8IZL8 1130 aaKnown RBP27.61■■■□□ 2.01
CDH22-202ENST00000474438 PDGFDQ9GZP0 370 aaPredicted RBP27.61■■■□□ 2.01
CDH22-202ENST00000474438 LAMB2P55268 1798 aa27.61■■■□□ 2.01
CDH22-202ENST00000474438 CIAO1O76071 339 aa27.6■■■□□ 2.01
CDH22-202ENST00000474438 SASH1O94885 1247 aa27.6■■■□□ 2.01
CDH22-202ENST00000474438 BCL11AQ9H165 835 aa27.6■■■□□ 2.01
CDH22-202ENST00000474438 MYH3P11055 1940 aa27.6■■■□□ 2.01
CDH22-202ENST00000474438 EYA2O00167 538 aa27.59■■■□□ 2.01
CDH22-202ENST00000474438 ATG9AQ7Z3C6 839 aa27.59■■■□□ 2.01
CDH22-202ENST00000474438 C16orf71Q8IYS4 520 aaPredicted RBP27.59■■■□□ 2.01
CDH22-202ENST00000474438 IL1RAPL2Q9NP60 686 aa27.59■■■□□ 2.01
CDH22-202ENST00000474438 SEC31BQ9NQW1 1179 aa27.59■■■□□ 2.01
CDH22-202ENST00000474438 RIC1Q4ADV7 1423 aa27.58■■■□□ 2.01
CDH22-202ENST00000474438 IL15P40933 162 aaPredicted RBP27.58■■■□□ 2.01
CDH22-202ENST00000474438 LDHAL6AQ6ZMR3 332 aa27.58■■■□□ 2.01
CDH22-202ENST00000474438 LRRC24Q50LG9 513 aa27.57■■■□□ 2
CDH22-202ENST00000474438 PUS3Q9BZE2 481 aaKnown RBP27.57■■■□□ 2
CDH22-202ENST00000474438 CLASRPQ8N2M8 674 aaKnown RBP27.56■■■□□ 2
CDH22-202ENST00000474438 CDC5LQ99459 802 aaKnown RBP27.56■■■□□ 2
CDH22-202ENST00000474438 TFCP2Q12800 502 aa27.55■■■□□ 2
CDH22-202ENST00000474438 IGHMBP2P38935 993 aaKnown RBP27.54■■■□□ 2
CDH22-202ENST00000474438 BRIP1Q9BX63 1249 aa27.54■■■□□ 2
CDH22-202ENST00000474438 CNNM1Q9NRU3 951 aa27.54■■■□□ 2
CDH22-202ENST00000474438 RIPOR2Q9Y4F9 1068 aa27.54■■■□□ 2
CDH22-202ENST00000474438 PLEKHM2Q8IWE5 1019 aa27.53■■■□□ 2
CDH22-202ENST00000474438 MPHOSPH8Q99549 860 aa27.53■■■□□ 2
CDH22-202ENST00000474438 R3HDM1Q15032 1099 aaKnown RBP27.52■■■□□ 2
CDH22-202ENST00000474438 DDX46Q7L014 1031 aaKnown RBP27.52■■■□□ 2
CDH22-202ENST00000474438 ANKRD18AQ8IVF6 992 aa27.52■■■□□ 2
CDH22-202ENST00000474438 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.52■■■□□ 2
CDH22-202ENST00000474438 OTUD7AQ8TE49 926 aaPredicted RBP27.52■■■□□ 2
CDH22-202ENST00000474438 CEP126Q9P2H0 1117 aa27.52■■■□□ 2
CDH22-202ENST00000474438 KLRG2A4D1S0 409 aaPredicted RBP27.51■■□□□ 1.99
CDH22-202ENST00000474438 CRY2Q49AN0 593 aa27.51■■□□□ 1.99
CDH22-202ENST00000474438 NRXN2Q9P2S2 1712 aa27.51■■□□□ 1.99
CDH22-202ENST00000474438 AACSQ86V21 672 aa27.49■■□□□ 1.99
CDH22-202ENST00000474438 RPGRQ92834 1020 aaKnown RBP27.49■■□□□ 1.99
CDH22-202ENST00000474438 GPR108Q9NPR9 543 aa27.49■■□□□ 1.99
CDH22-202ENST00000474438 IFIT2P09913 472 aaKnown RBP27.49■■□□□ 1.99
CDH22-202ENST00000474438 RPS8P62241 208 aaKnown RBP27.49■■□□□ 1.99
CDH22-202ENST00000474438 METTL24Q5JXM2 366 aa27.49■■□□□ 1.99
CDH22-202ENST00000474438 EAF2Q96CJ1 260 aaPredicted RBP27.49■■□□□ 1.99
CDH22-202ENST00000474438 SALL3Q9BXA9 1300 aa27.48■■□□□ 1.99
CDH22-202ENST00000474438 TNRC6CQ9HCJ0 1690 aaKnown RBP27.48■■□□□ 1.99
CDH22-202ENST00000474438 PDE6BP35913 854 aa27.48■■□□□ 1.99
CDH22-202ENST00000474438 TNNI3KQ59H18 835 aa27.48■■□□□ 1.99
CDH22-202ENST00000474438 CELF1Q92879 486 aaKnown RBP27.48■■□□□ 1.99
CDH22-202ENST00000474438 BSDC1Q9NW68 430 aaPredicted RBP27.48■■□□□ 1.99
CDH22-202ENST00000474438 FPGT-TNNI3KV9GXZ4 949 aa27.48■■□□□ 1.99
CDH22-202ENST00000474438 MX1P20591 662 aa27.47■■□□□ 1.99
CDH22-202ENST00000474438 RBM17Q96I25 401 aaKnown RBP27.47■■□□□ 1.99
CDH22-202ENST00000474438 MROH5Q6ZUA9 1318 aa27.47■■□□□ 1.99
CDH22-202ENST00000474438 PDE1AP54750 535 aa27.46■■□□□ 1.99
CDH22-202ENST00000474438 OSBPL3Q9H4L5 887 aa27.46■■□□□ 1.99
CDH22-202ENST00000474438 STAP2Q9UGK3 403 aa27.46■■□□□ 1.99
CDH22-202ENST00000474438 AKAP2Q9Y2D5 859 aa27.46■■□□□ 1.99
CDH22-202ENST00000474438 ZBTB7AO95365 584 aa27.45■■□□□ 1.99
CDH22-202ENST00000474438 MTFR1LQ9H019 292 aa27.45■■□□□ 1.99
CDH22-202ENST00000474438 HOXA10P31260 410 aaPredicted RBP27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms