RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 RESTQ13127 1097 aa21.83■■□□□ 1.09
ECHDC1-214ENST00000474289 ANKRD1Q15327 319 aa21.83■■□□□ 1.09
ECHDC1-214ENST00000474289 BLOC1S2Q6QNY1 142 aa21.83■■□□□ 1.09
ECHDC1-214ENST00000474289 PHAXQ9H814 394 aaKnown RBP21.83■■□□□ 1.09
ECHDC1-214ENST00000474289 RAD51AP2Q09MP3 1159 aa21.82■■□□□ 1.08
ECHDC1-214ENST00000474289 ARHGAP29Q52LW3 1261 aa21.82■■□□□ 1.08
ECHDC1-214ENST00000474289 SYT10Q6XYQ8 523 aa21.82■■□□□ 1.08
ECHDC1-214ENST00000474289 SYTL4Q96C24 671 aaPredicted RBP21.82■■□□□ 1.08
ECHDC1-214ENST00000474289 PPP1R13BQ96KQ4 1090 aa21.82■■□□□ 1.08
ECHDC1-214ENST00000474289 FAM227BQ96M60 508 aa21.82■■□□□ 1.08
ECHDC1-214ENST00000474289 TRIM34Q9BYJ4 488 aa21.82■■□□□ 1.08
ECHDC1-214ENST00000474289 TECPR2O15040 1411 aa21.82■■□□□ 1.08
ECHDC1-214ENST00000474289 GSDMDP57764 484 aa21.82■■□□□ 1.08
ECHDC1-214ENST00000474289 TSPYL1Q9H0U9 437 aa21.82■■□□□ 1.08
ECHDC1-214ENST00000474289 TAF6LQ9Y6J9 622 aa21.82■■□□□ 1.08
ECHDC1-214ENST00000474289 JAK2O60674 1132 aa21.81■■□□□ 1.08
ECHDC1-214ENST00000474289 RPS6KB1P23443 525 aa21.81■■□□□ 1.08
ECHDC1-214ENST00000474289 OS9Q13438 667 aaPredicted RBP21.81■■□□□ 1.08
ECHDC1-214ENST00000474289 HSP90AB4PQ58FF6 505 aa21.81■■□□□ 1.08
ECHDC1-214ENST00000474289 NBPF11Q86T75 865 aa21.81■■□□□ 1.08
ECHDC1-214ENST00000474289 DDX11Q96FC9 970 aa21.81■■□□□ 1.08
ECHDC1-214ENST00000474289 ECHDC1Q9NTX5 307 aa21.81■■□□□ 1.08
ECHDC1-214ENST00000474289 FEZ2Q9UHY8 353 aaPredicted RBP21.81■■□□□ 1.08
ECHDC1-214ENST00000474289 ZRANB2O95218 330 aaKnown RBP eCLIP21.81■■□□□ 1.08
ECHDC1-214ENST00000474289 OSBPL5Q9H0X9 879 aaPredicted RBP21.81■■□□□ 1.08
ECHDC1-214ENST00000474289 USP6P35125 1406 aa21.8■■□□□ 1.08
ECHDC1-214ENST00000474289 CTAGE5O15320 804 aa21.8■■□□□ 1.08
ECHDC1-214ENST00000474289 SIRT1Q96EB6 747 aa21.8■■□□□ 1.08
ECHDC1-214ENST00000474289 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.8■■□□□ 1.081e-7■■■■■ 27.3
ECHDC1-214ENST00000474289 NALCNQ8IZF0 1738 aa21.8■■□□□ 1.08
ECHDC1-214ENST00000474289 CEP170BQ9Y4F5 1589 aaPredicted RBP21.8■■□□□ 1.08
ECHDC1-214ENST00000474289 CEBPZQ03701 1054 aaKnown RBP21.8■■□□□ 1.08
ECHDC1-214ENST00000474289 CLASRPQ8N2M8 674 aaKnown RBP21.8■■□□□ 1.08
ECHDC1-214ENST00000474289 BRF1Q92994 677 aa21.8■■□□□ 1.08
ECHDC1-214ENST00000474289 EVI5LQ96CN4 794 aa21.8■■□□□ 1.08
ECHDC1-214ENST00000474289 USP31Q70CQ4 1352 aa21.8■■□□□ 1.08
ECHDC1-214ENST00000474289 LRRC37A3O60309 1634 aa21.79■■□□□ 1.08
ECHDC1-214ENST00000474289 EYA1Q99502 592 aa21.79■■□□□ 1.08
ECHDC1-214ENST00000474289 NPHP4O75161 1426 aaPredicted RBP21.79■■□□□ 1.08
ECHDC1-214ENST00000474289 NMIQ13287 307 aaPredicted RBP21.79■■□□□ 1.08
ECHDC1-214ENST00000474289 AOPEPQ8N6M6 819 aa21.79■■□□□ 1.08
ECHDC1-214ENST00000474289 NEK11Q8NG66 645 aa21.79■■□□□ 1.08
ECHDC1-214ENST00000474289 GOLPH3LQ9H4A5 285 aa21.79■■□□□ 1.08
ECHDC1-214ENST00000474289 CFAP45Q9UL16 551 aa21.79■■□□□ 1.08
ECHDC1-214ENST00000474289 CCAR1Q8IX12 1150 aaKnown RBP21.78■■□□□ 1.08
ECHDC1-214ENST00000474289 ALDH8A1Q9H2A2 487 aaPredicted RBP21.78■■□□□ 1.08
ECHDC1-214ENST00000474289 ANO10Q9NW15 660 aa21.78■■□□□ 1.08
ECHDC1-214ENST00000474289 KDRP35968 1356 aa21.78■■□□□ 1.08
ECHDC1-214ENST00000474289 POLR3GO15318 223 aaPredicted RBP21.77■■□□□ 1.08
ECHDC1-214ENST00000474289 TEX35Q5T0J7 233 aa21.77■■□□□ 1.08
ECHDC1-214ENST00000474289 HDGFL1Q5TGJ6 251 aa21.77■■□□□ 1.08
ECHDC1-214ENST00000474289 TMCO3Q6UWJ1 677 aa21.77■■□□□ 1.08
ECHDC1-214ENST00000474289 CEP57L1Q8IYX8 460 aa21.77■■□□□ 1.08
ECHDC1-214ENST00000474289 IMPACTQ9P2X3 320 aa21.77■■□□□ 1.08
ECHDC1-214ENST00000474289 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.76■■□□□ 1.07
ECHDC1-214ENST00000474289 PLEKHG3A1L390 1219 aa21.76■■□□□ 1.07
ECHDC1-214ENST00000474289 PSDA5PKW4 1024 aaPredicted RBP21.76■■□□□ 1.07
ECHDC1-214ENST00000474289 H3BQV1 296 aa21.76■■□□□ 1.07
ECHDC1-214ENST00000474289 IFFO2Q5TF58 517 aa21.76■■□□□ 1.07
ECHDC1-214ENST00000474289 ARMCX5Q6P1M9 558 aa21.76■■□□□ 1.07
ECHDC1-214ENST00000474289 GPATCH3Q96I76 525 aa21.76■■□□□ 1.07
ECHDC1-214ENST00000474289 FTOQ9C0B1 505 aaKnown RBP eCLIP21.76■■□□□ 1.07
ECHDC1-214ENST00000474289 ORC3Q9UBD5 711 aaPredicted RBP21.76■■□□□ 1.07
ECHDC1-214ENST00000474289 ZSCAN16Q9H4T2 348 aaPredicted RBP21.76■■□□□ 1.07
ECHDC1-214ENST00000474289 FMN2Q9NZ56 1722 aa21.75■■□□□ 1.07
ECHDC1-214ENST00000474289 IFIT2P09913 472 aaKnown RBP21.75■■□□□ 1.07
ECHDC1-214ENST00000474289 ERCC4Q92889 916 aaPredicted RBP21.75■■□□□ 1.07
ECHDC1-214ENST00000474289 ARGLU1Q9NWB6 273 aaPredicted RBP21.75■■□□□ 1.07
ECHDC1-214ENST00000474289 A0A0D9SFI3 127 aa21.75■■□□□ 1.07
ECHDC1-214ENST00000474289 KINO60870 393 aaKnown RBP21.75■■□□□ 1.07
ECHDC1-214ENST00000474289 ADD1P35611 737 aaKnown RBP21.75■■□□□ 1.07
ECHDC1-214ENST00000474289 TPM4P67936 248 aa21.75■■□□□ 1.07
ECHDC1-214ENST00000474289 GORABQ5T7V8 394 aa21.75■■□□□ 1.07
ECHDC1-214ENST00000474289 FBXW7Q969H0 707 aa21.75■■□□□ 1.07
ECHDC1-214ENST00000474289 SNRKQ9NRH2 765 aa21.75■■□□□ 1.07
ECHDC1-214ENST00000474289 TOPAZ1Q8N9V7 1692 aa21.74■■□□□ 1.07
ECHDC1-214ENST00000474289 CCDC73Q6ZRK6 1079 aa21.74■■□□□ 1.07
ECHDC1-214ENST00000474289 CCDC150Q8NCX0 1101 aa21.74■■□□□ 1.07
ECHDC1-214ENST00000474289 UBXN4Q92575 508 aa21.74■■□□□ 1.07
ECHDC1-214ENST00000474289 IGSF1Q8N6C5 1336 aa21.74■■□□□ 1.07
ECHDC1-214ENST00000474289 FLT4P35916 1363 aa21.74■■□□□ 1.07
ECHDC1-214ENST00000474289 ST5P78524 1137 aa21.74■■□□□ 1.07
ECHDC1-214ENST00000474289 MUM1L1Q5H9M0 696 aa21.74■■□□□ 1.07
ECHDC1-214ENST00000474289 TXLNBQ8N3L3 684 aa21.74■■□□□ 1.07
ECHDC1-214ENST00000474289 NFATC2IPQ8NCF5 419 aa21.74■■□□□ 1.07
ECHDC1-214ENST00000474289 GNAT3A8MTJ3 354 aa21.73■■□□□ 1.07
ECHDC1-214ENST00000474289 BEND3Q5T5X7 828 aa21.73■■□□□ 1.07
ECHDC1-214ENST00000474289 ENGASEQ8NFI3 743 aa21.73■■□□□ 1.07
ECHDC1-214ENST00000474289 RCOR1Q9UKL0 485 aa21.73■■□□□ 1.07
ECHDC1-214ENST00000474289 HIP1O00291 1037 aa21.72■■□□□ 1.07
ECHDC1-214ENST00000474289 SFPQP23246 707 aaKnown RBP eCLIP21.72■■□□□ 1.07
ECHDC1-214ENST00000474289 KCNJ6P48051 423 aa21.72■■□□□ 1.07
ECHDC1-214ENST00000474289 AMPHP49418 695 aa21.72■■□□□ 1.07
ECHDC1-214ENST00000474289 TAF7Q15545 349 aaPredicted RBP21.72■■□□□ 1.07
ECHDC1-214ENST00000474289 TMC6Q7Z403 805 aa21.72■■□□□ 1.07
ECHDC1-214ENST00000474289 SBNO1A3KN83 1393 aa21.72■■□□□ 1.07
ECHDC1-214ENST00000474289 SEC31AO94979 1220 aaKnown RBP21.72■■□□□ 1.07
ECHDC1-214ENST00000474289 IL17REQ8NFR9 667 aa21.72■■□□□ 1.07
ECHDC1-214ENST00000474289 SMARCE1Q969G3 411 aa21.72■■□□□ 1.07
ECHDC1-214ENST00000474289 UBXN6Q9BZV1 441 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms