RNA–Protein interactions for RNA: ENST00000474258.1

SEMA4D-216, Transcript of semaphorin 4D, humanhuman

TSL 4

Gene SEMA4D, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-216ENST00000474258 MIER1Q8N108 512 aa14.33□□□□□ -0.12
SEMA4D-216ENST00000474258 CNTROBQ8N137 903 aa14.33□□□□□ -0.12
SEMA4D-216ENST00000474258 MPNDQ8N594 471 aa14.33□□□□□ -0.12
SEMA4D-216ENST00000474258 ZNF428Q96B54 188 aa14.33□□□□□ -0.12
SEMA4D-216ENST00000474258 MKRN1Q9UHC7 482 aaKnown RBP14.33□□□□□ -0.12
SEMA4D-216ENST00000474258 PCNTO95613 3336 aa14.33□□□□□ -0.12
SEMA4D-216ENST00000474258 ELL2O00472 640 aaPredicted RBP14.32□□□□□ -0.12
SEMA4D-216ENST00000474258 HSPA1AP0DMV8 641 aaKnown RBP14.32□□□□□ -0.12
SEMA4D-216ENST00000474258 HSPA1BP0DMV9 641 aaKnown RBP14.32□□□□□ -0.12
SEMA4D-216ENST00000474258 SCNN1DP51172 638 aa14.32□□□□□ -0.12
SEMA4D-216ENST00000474258 TRIM28Q13263 835 aaKnown RBP14.32□□□□□ -0.12
SEMA4D-216ENST00000474258 MAP1SQ66K74 1059 aaPredicted RBP14.32□□□□□ -0.12
SEMA4D-216ENST00000474258 RIC3Q7Z5B4 369 aa14.32□□□□□ -0.12
SEMA4D-216ENST00000474258 FAM89AQ96GI7 184 aa14.32□□□□□ -0.12
SEMA4D-216ENST00000474258 CHMP4AQ9BY43 222 aa14.32□□□□□ -0.12
SEMA4D-216ENST00000474258 ZNRF3Q9ULT6 936 aa14.32□□□□□ -0.12
SEMA4D-216ENST00000474258 LRRC37AA6NMS7 1700 aa14.32□□□□□ -0.12
SEMA4D-216ENST00000474258 CACNA1FO60840 1977 aa14.31□□□□□ -0.12
SEMA4D-216ENST00000474258 EPS15P42566 896 aa14.31□□□□□ -0.12
SEMA4D-216ENST00000474258 GOLGA2Q08379 1002 aa14.31□□□□□ -0.12
SEMA4D-216ENST00000474258 KIAA2012Q0VF49 1180 aa14.31□□□□□ -0.12
SEMA4D-216ENST00000474258 SF3B3Q15393 1217 aaKnown RBP14.31□□□□□ -0.12
SEMA4D-216ENST00000474258 COL13A1Q5TAT6 717 aaPredicted RBP14.31□□□□□ -0.12
SEMA4D-216ENST00000474258 USP50Q70EL3 339 aaPredicted RBP14.31□□□□□ -0.12
SEMA4D-216ENST00000474258 CNTNAP1P78357 1384 aa14.31□□□□□ -0.12
SEMA4D-216ENST00000474258 CXCL9Q07325 125 aa14.3□□□□□ -0.12
SEMA4D-216ENST00000474258 PHAXQ9H814 394 aaKnown RBP14.3□□□□□ -0.12
SEMA4D-216ENST00000474258 POLR2AP24928 1970 aaKnown RBP14.29□□□□□ -0.12
SEMA4D-216ENST00000474258 IRS4O14654 1257 aaPredicted RBP14.29□□□□□ -0.12
SEMA4D-216ENST00000474258 HSP90B1P14625 803 aaKnown RBP14.29□□□□□ -0.12
SEMA4D-216ENST00000474258 RTL5Q5HYW3 569 aaPredicted RBP14.29□□□□□ -0.12
SEMA4D-216ENST00000474258 CIAPIN1Q6FI81 312 aa14.29□□□□□ -0.12
SEMA4D-216ENST00000474258 ZBTB38Q8NAP3 1195 aaPredicted RBP14.29□□□□□ -0.12
SEMA4D-216ENST00000474258 C8orf58Q8NAV2 365 aa14.29□□□□□ -0.12
SEMA4D-216ENST00000474258 GPRC5DQ9NZD1 345 aa14.29□□□□□ -0.12
SEMA4D-216ENST00000474258 MYH3P11055 1940 aa14.28□□□□□ -0.12
SEMA4D-216ENST00000474258 TNIP1Q15025 636 aa14.28□□□□□ -0.12
SEMA4D-216ENST00000474258 CCDC30Q5VVM6 783 aa14.28□□□□□ -0.12
SEMA4D-216ENST00000474258 CELF1Q92879 486 aaKnown RBP14.28□□□□□ -0.12
SEMA4D-216ENST00000474258 MYD88Q99836 296 aa14.28□□□□□ -0.12
SEMA4D-216ENST00000474258 ADARB2Q9NS39 739 aaKnown RBP14.28□□□□□ -0.12
SEMA4D-216ENST00000474258 DDX58O95786 925 aaKnown RBP14.27□□□□□ -0.13
SEMA4D-216ENST00000474258 VEGFBP49765 207 aa14.27□□□□□ -0.13
SEMA4D-216ENST00000474258 CCDC184Q52MB2 194 aa14.27□□□□□ -0.13
SEMA4D-216ENST00000474258 CCDC191Q8NCU4 936 aa14.27□□□□□ -0.13
SEMA4D-216ENST00000474258 BCL2L13Q9BXK5 485 aa14.27□□□□□ -0.13
SEMA4D-216ENST00000474258 NSFL1CQ9UNZ2 370 aaKnown RBP14.27□□□□□ -0.13
SEMA4D-216ENST00000474258 DUOX1Q9NRD9 1551 aa14.26□□□□□ -0.13
SEMA4D-216ENST00000474258 RASSF10A6NK89 507 aa14.26□□□□□ -0.13
SEMA4D-216ENST00000474258 ANP32CO43423 234 aa14.26□□□□□ -0.13
SEMA4D-216ENST00000474258 RAD17O75943 681 aa14.26□□□□□ -0.13
SEMA4D-216ENST00000474258 GMPSP49915 693 aaPredicted RBP14.26□□□□□ -0.13
SEMA4D-216ENST00000474258 RPS8P62241 208 aaKnown RBP14.26□□□□□ -0.13
SEMA4D-216ENST00000474258 CCDC27Q2M243 656 aa14.26□□□□□ -0.13
SEMA4D-216ENST00000474258 WASHC4Q2M389 1173 aa14.26□□□□□ -0.13
SEMA4D-216ENST00000474258 DEFB115Q30KQ5 88 aa14.26□□□□□ -0.13
SEMA4D-216ENST00000474258 CDHR2Q9BYE9 1310 aa14.25□□□□□ -0.13
SEMA4D-216ENST00000474258 YDJCA8MPS7 323 aa14.25□□□□□ -0.13
SEMA4D-216ENST00000474258 C6orf229H3BNL8 230 aa14.25□□□□□ -0.13
SEMA4D-216ENST00000474258 PCCAP05165 728 aaPredicted RBP14.25□□□□□ -0.13
SEMA4D-216ENST00000474258 TNS4Q8IZW8 715 aa14.25□□□□□ -0.13
SEMA4D-216ENST00000474258 TSPYL6Q8N831 410 aa14.25□□□□□ -0.13
SEMA4D-216ENST00000474258 METTL22Q9BUU2 404 aaPredicted RBP14.25□□□□□ -0.13
SEMA4D-216ENST00000474258 CWC25Q9NXE8 425 aaPredicted RBP14.25□□□□□ -0.13
SEMA4D-216ENST00000474258 COL4A1P02462 1669 aa14.24□□□□□ -0.13
SEMA4D-216ENST00000474258 PDE8AO60658 829 aa14.24□□□□□ -0.13
SEMA4D-216ENST00000474258 GPSM2P81274 684 aa14.24□□□□□ -0.13
SEMA4D-216ENST00000474258 CCDC152Q4G0S7 254 aa14.24□□□□□ -0.13
SEMA4D-216ENST00000474258 WWC1Q8IX03 1113 aa14.24□□□□□ -0.13
SEMA4D-216ENST00000474258 EYA3Q99504 573 aa14.24□□□□□ -0.13
SEMA4D-216ENST00000474258 POLLQ9UGP5 575 aa14.24□□□□□ -0.13
SEMA4D-216ENST00000474258 ABT1Q9ULW3 272 aaKnown RBP14.24□□□□□ -0.13
SEMA4D-216ENST00000474258 H7C1D1 291 aa14.23□□□□□ -0.13
SEMA4D-216ENST00000474258 RIMBP2O15034 1052 aa14.23□□□□□ -0.13
SEMA4D-216ENST00000474258 NCBP3Q53F19 620 aaKnown RBP14.23□□□□□ -0.13
SEMA4D-216ENST00000474258 KSR2Q6VAB6 950 aa14.23□□□□□ -0.13
SEMA4D-216ENST00000474258 TSR2Q969E8 191 aaKnown RBP14.23□□□□□ -0.13
SEMA4D-216ENST00000474258 STK31Q9BXU1 1019 aa14.23□□□□□ -0.13
SEMA4D-216ENST00000474258 SEC31BQ9NQW1 1179 aa14.23□□□□□ -0.13
SEMA4D-216ENST00000474258 PGAP2Q9UHJ9 254 aa14.23□□□□□ -0.13
SEMA4D-216ENST00000474258 CNOT7Q9UIV1 285 aaKnown RBP14.23□□□□□ -0.13
SEMA4D-216ENST00000474258 MAP3K2Q9Y2U5 619 aa14.23□□□□□ -0.13
SEMA4D-216ENST00000474258 SCN9AQ15858 1988 aa14.23□□□□□ -0.13
SEMA4D-216ENST00000474258 WDR33Q9C0J8 1336 aaKnown RBP14.22□□□□□ -0.13
SEMA4D-216ENST00000474258 CCER2I3L3R5 266 aa14.22□□□□□ -0.13
SEMA4D-216ENST00000474258 FMR1Q06787 632 aaKnown RBP eCLIP14.22□□□□□ -0.13
SEMA4D-216ENST00000474258 ZC3H15Q8WU90 426 aaKnown RBP14.22□□□□□ -0.13
SEMA4D-216ENST00000474258 DPF2Q92785 391 aa14.22□□□□□ -0.13
SEMA4D-216ENST00000474258 AIDAQ96BJ3 306 aa14.22□□□□□ -0.13
SEMA4D-216ENST00000474258 DBNDD1Q9H9R9 158 aa14.22□□□□□ -0.13
SEMA4D-216ENST00000474258 PODXL2Q9NZ53 605 aa14.22□□□□□ -0.13
SEMA4D-216ENST00000474258 SPEF2Q9C093 1822 aa14.22□□□□□ -0.13
SEMA4D-216ENST00000474258 IL16Q14005 1332 aa14.21□□□□□ -0.13
SEMA4D-216ENST00000474258 PSME4Q14997 1843 aa14.21□□□□□ -0.13
SEMA4D-216ENST00000474258 PI4KAP2A4QPH2 592 aa14.21□□□□□ -0.13
SEMA4D-216ENST00000474258 TRAF5O00463 557 aa14.21□□□□□ -0.13
SEMA4D-216ENST00000474258 PSMD14O00487 310 aa14.21□□□□□ -0.13
SEMA4D-216ENST00000474258 FOXN1O15353 648 aa14.21□□□□□ -0.13
SEMA4D-216ENST00000474258 NEXNQ0ZGT2 675 aa14.21□□□□□ -0.13
SEMA4D-216ENST00000474258 TWISTNBQ3B726 338 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms