RNA–Protein interactions for RNA: ENST00000474256.1

CDPF1-205, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3

Gene CDPF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-205ENST00000474256 SCN4AP35499 1836 aa20.37■□□□□ 0.85
CDPF1-205ENST00000474256 IRS4O14654 1257 aaPredicted RBP20.37■□□□□ 0.85
CDPF1-205ENST00000474256 AOC3Q16853 763 aa20.37■□□□□ 0.85
CDPF1-205ENST00000474256 RTL5Q5HYW3 569 aaPredicted RBP20.37■□□□□ 0.85
CDPF1-205ENST00000474256 PNMA8AQ86V59 439 aaPredicted RBP20.37■□□□□ 0.85
CDPF1-205ENST00000474256 NIM1KQ8IY84 436 aa20.37■□□□□ 0.85
CDPF1-205ENST00000474256 MPNDQ8N594 471 aa20.37■□□□□ 0.85
CDPF1-205ENST00000474256 ZBTB38Q8NAP3 1195 aaPredicted RBP20.37■□□□□ 0.85
CDPF1-205ENST00000474256 MYD88Q99836 296 aa20.37■□□□□ 0.85
CDPF1-205ENST00000474256 LAMB2P55268 1798 aa20.36■□□□□ 0.85
CDPF1-205ENST00000474256 DDX58O95786 925 aaKnown RBP20.36■□□□□ 0.85
CDPF1-205ENST00000474256 CCDC191Q8NCU4 936 aa20.36■□□□□ 0.85
CDPF1-205ENST00000474256 METTL22Q9BUU2 404 aaPredicted RBP20.36■□□□□ 0.85
CDPF1-205ENST00000474256 GJA3Q9Y6H8 435 aa20.36■□□□□ 0.85
CDPF1-205ENST00000474256 PASKQ96RG2 1323 aa20.35■□□□□ 0.85
CDPF1-205ENST00000474256 KIAA2012Q0VF49 1180 aa20.35■□□□□ 0.85
CDPF1-205ENST00000474256 EAPPQ56P03 285 aaPredicted RBP20.35■□□□□ 0.85
CDPF1-205ENST00000474256 CELF1Q92879 486 aaKnown RBP20.35■□□□□ 0.85
CDPF1-205ENST00000474256 SCNN1DP51172 638 aa20.34■□□□□ 0.85
CDPF1-205ENST00000474256 TWISTNBQ3B726 338 aaPredicted RBP20.34■□□□□ 0.85
CDPF1-205ENST00000474256 ZNRF3Q9ULT6 936 aa20.34■□□□□ 0.85
CDPF1-205ENST00000474256 DDX60Q8IY21 1712 aaKnown RBP20.33■□□□□ 0.85
CDPF1-205ENST00000474256 ITGBL1O95965 494 aaPredicted RBP20.33■□□□□ 0.85
CDPF1-205ENST00000474256 PCCAP05165 728 aaPredicted RBP20.33■□□□□ 0.85
CDPF1-205ENST00000474256 HSP90B1P14625 803 aaKnown RBP20.33■□□□□ 0.85
CDPF1-205ENST00000474256 KSR2Q6VAB6 950 aa20.33■□□□□ 0.85
CDPF1-205ENST00000474256 CREBZFQ9NS37 354 aa20.33■□□□□ 0.85
CDPF1-205ENST00000474256 CWC25Q9NXE8 425 aaPredicted RBP20.33■□□□□ 0.85
CDPF1-205ENST00000474256 MAP3K2Q9Y2U5 619 aa20.33■□□□□ 0.85
CDPF1-205ENST00000474256 CXCL9Q07325 125 aa20.32■□□□□ 0.84
CDPF1-205ENST00000474256 WDR63Q8IWG1 891 aa20.32■□□□□ 0.84
CDPF1-205ENST00000474256 STK31Q9BXU1 1019 aa20.32■□□□□ 0.84
CDPF1-205ENST00000474256 CLEC11AQ9Y240 323 aa20.32■□□□□ 0.84
CDPF1-205ENST00000474256 PI4KAP2A4QPH2 592 aa20.31■□□□□ 0.84
CDPF1-205ENST00000474256 LMOD1P29536 600 aaPredicted RBP20.31■□□□□ 0.84
CDPF1-205ENST00000474256 EPS15P42566 896 aa20.31■□□□□ 0.84
CDPF1-205ENST00000474256 RPS8P62241 208 aaKnown RBP20.31■□□□□ 0.84
CDPF1-205ENST00000474256 PI4KAP1Q8N8J0 262 aa20.31■□□□□ 0.84
CDPF1-205ENST00000474256 ADAMTSL1Q8N6G6 1762 aa20.31■□□□□ 0.84
CDPF1-205ENST00000474256 FANCIQ9NVI1 1328 aa20.3■□□□□ 0.84
CDPF1-205ENST00000474256 DUOX1Q9NRD9 1551 aa20.29■□□□□ 0.84
CDPF1-205ENST00000474256 PDE8AO60658 829 aa20.29■□□□□ 0.84
CDPF1-205ENST00000474256 SLC4A2P04920 1241 aa20.29■□□□□ 0.84
CDPF1-205ENST00000474256 IGKV5-2P06315 115 aa20.29■□□□□ 0.84
CDPF1-205ENST00000474256 MAP1SQ66K74 1059 aaPredicted RBP20.29■□□□□ 0.84
CDPF1-205ENST00000474256 G2E3Q7L622 706 aa20.29■□□□□ 0.84
CDPF1-205ENST00000474256 CNTROBQ8N137 903 aa20.29■□□□□ 0.84
CDPF1-205ENST00000474256 NSFL1CQ9UNZ2 370 aaKnown RBP20.29■□□□□ 0.84
CDPF1-205ENST00000474256 COL4A1P02462 1669 aa20.29■□□□□ 0.84
CDPF1-205ENST00000474256 LRRC37AA6NMS7 1700 aa20.28■□□□□ 0.84
CDPF1-205ENST00000474256 LTBP1Q14766 1721 aa20.28■□□□□ 0.84
CDPF1-205ENST00000474256 GPSM2P81274 684 aa20.28■□□□□ 0.84
CDPF1-205ENST00000474256 USP50Q70EL3 339 aaPredicted RBP20.28■□□□□ 0.84
CDPF1-205ENST00000474256 JARID2Q92833 1246 aaPredicted RBP20.28■□□□□ 0.84
CDPF1-205ENST00000474256 SEC31BQ9NQW1 1179 aa20.28■□□□□ 0.84
CDPF1-205ENST00000474256 GPRC5DQ9NZD1 345 aa20.28■□□□□ 0.84
CDPF1-205ENST00000474256 SALL2Q9Y467 1007 aaPredicted RBP20.28■□□□□ 0.84
CDPF1-205ENST00000474256 CDHR2Q9BYE9 1310 aa20.27■□□□□ 0.84
CDPF1-205ENST00000474256 WASHC4Q2M389 1173 aa20.27■□□□□ 0.84
CDPF1-205ENST00000474256 CCDC152Q4G0S7 254 aa20.27■□□□□ 0.84
CDPF1-205ENST00000474256 CIAPIN1Q6FI81 312 aa20.27■□□□□ 0.84
CDPF1-205ENST00000474256 POLLQ9UGP5 575 aa20.27■□□□□ 0.84
CDPF1-205ENST00000474256 TAF1P21675 1872 aa20.26■□□□□ 0.83
CDPF1-205ENST00000474256 YDJCA8MPS7 323 aa20.26■□□□□ 0.83
CDPF1-205ENST00000474256 VAMP4O75379 141 aa20.26■□□□□ 0.83
CDPF1-205ENST00000474256 NEXNQ0ZGT2 675 aa20.26■□□□□ 0.83
CDPF1-205ENST00000474256 TMEM88BA6NKF7 163 aa20.25■□□□□ 0.83
CDPF1-205ENST00000474256 RAD17O75943 681 aa20.25■□□□□ 0.83
CDPF1-205ENST00000474256 GMPSP49915 693 aaPredicted RBP20.25■□□□□ 0.83
CDPF1-205ENST00000474256 TNIP1Q15025 636 aa20.25■□□□□ 0.83
CDPF1-205ENST00000474256 CWF19L2Q2TBE0 894 aaKnown RBP20.25■□□□□ 0.83
CDPF1-205ENST00000474256 FAM9BQ8IZU0 186 aa20.25■□□□□ 0.83
CDPF1-205ENST00000474256 SPINK5Q9NQ38 1064 aaPredicted RBP20.25■□□□□ 0.83
CDPF1-205ENST00000474256 ADARB2Q9NS39 739 aaKnown RBP20.25■□□□□ 0.83
CDPF1-205ENST00000474256 PODXL2Q9NZ53 605 aa20.25■□□□□ 0.83
CDPF1-205ENST00000474256 NEURL1BA8MQ27 555 aa20.24■□□□□ 0.83
CDPF1-205ENST00000474256 C6orf229H3BNL8 230 aa20.24■□□□□ 0.83
CDPF1-205ENST00000474256 FLIIQ13045 1269 aa20.24■□□□□ 0.83
CDPF1-205ENST00000474256 TBC1D16Q8TBP0 767 aa20.24■□□□□ 0.83
CDPF1-205ENST00000474256 MKRN1Q9UHC7 482 aaKnown RBP20.24■□□□□ 0.83
CDPF1-205ENST00000474256 EXOSC9Q06265 439 aaKnown RBP20.23■□□□□ 0.83
CDPF1-205ENST00000474256 IFFO2Q5TF58 517 aa20.23■□□□□ 0.83
CDPF1-205ENST00000474256 CCDC85AQ96PX6 553 aaPredicted RBP20.23■□□□□ 0.83
CDPF1-205ENST00000474256 EYA3Q99504 573 aa20.23■□□□□ 0.83
CDPF1-205ENST00000474256 CNTNAP1P78357 1384 aa20.22■□□□□ 0.83
CDPF1-205ENST00000474256 H7C1W4 665 aa20.22■□□□□ 0.83
CDPF1-205ENST00000474256 RIMBP2O15034 1052 aa20.22■□□□□ 0.83
CDPF1-205ENST00000474256 CTSWP56202 376 aa20.22■□□□□ 0.83
CDPF1-205ENST00000474256 TTLL11Q8NHH1 800 aa20.22■□□□□ 0.83
CDPF1-205ENST00000474256 DBNDD1Q9H9R9 158 aa20.22■□□□□ 0.83
CDPF1-205ENST00000474256 BCL2L13Q9BXK5 485 aa20.21■□□□□ 0.83
CDPF1-205ENST00000474256 FKBP5Q13451 457 aaPredicted RBP20.2■□□□□ 0.82
CDPF1-205ENST00000474256 GCKRQ14397 625 aa20.2■□□□□ 0.82
CDPF1-205ENST00000474256 ANKRD18AQ8IVF6 992 aa20.2■□□□□ 0.82
CDPF1-205ENST00000474256 DNAAF4Q8WXU2 420 aa20.2■□□□□ 0.82
CDPF1-205ENST00000474256 GPR101Q96P66 508 aaPredicted RBP20.2■□□□□ 0.82
CDPF1-205ENST00000474256 MYH16Q9H6N6 1097 aa20.2■□□□□ 0.82
CDPF1-205ENST00000474256 ANKIB1Q9P2G1 1089 aa20.2■□□□□ 0.82
CDPF1-205ENST00000474256 PCNTO95613 3336 aa20.2■□□□□ 0.82
CDPF1-205ENST00000474256 PSMD14O00487 310 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms