RNA–Protein interactions for RNA: ENST00000474254.5

CPA4-205, Transcript of carboxypeptidase A4, humanhuman

TSL 1 (best)

Gene CPA4, Length 1,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-205ENST00000474254 SUPT20HQ8NEM7 779 aa21.04■□□□□ 0.96
CPA4-205ENST00000474254 TSR2Q969E8 191 aaKnown RBP21.04■□□□□ 0.96
CPA4-205ENST00000474254 ATP6V0A2Q9Y487 856 aa21.04■□□□□ 0.96
CPA4-205ENST00000474254 ABCC4O15439 1325 aa21.04■□□□□ 0.96
CPA4-205ENST00000474254 SLC10A5Q5PT55 438 aa21.03■□□□□ 0.96
CPA4-205ENST00000474254 ABT1Q9ULW3 272 aaKnown RBP21.03■□□□□ 0.96
CPA4-205ENST00000474254 FOXN1O15353 648 aa21.02■□□□□ 0.96
CPA4-205ENST00000474254 AOC3Q16853 763 aa21.02■□□□□ 0.96
CPA4-205ENST00000474254 DEFB115Q30KQ5 88 aa21.02■□□□□ 0.96
CPA4-205ENST00000474254 SLC51AQ86UW1 340 aa21.02■□□□□ 0.96
CPA4-205ENST00000474254 VPS33BQ9H267 617 aa21.02■□□□□ 0.96
CPA4-205ENST00000474254 EPS15P42566 896 aa21.01■□□□□ 0.95
CPA4-205ENST00000474254 SCNN1DP51172 638 aa21.01■□□□□ 0.95
CPA4-205ENST00000474254 TSPYL6Q8N831 410 aa21.01■□□□□ 0.95
CPA4-205ENST00000474254 ISCA1Q9BUE6 129 aa21.01■□□□□ 0.95
CPA4-205ENST00000474254 CHMP4AQ9BY43 222 aa21.01■□□□□ 0.95
CPA4-205ENST00000474254 TRMT112Q9UI30 125 aaKnown RBP21.01■□□□□ 0.95
CPA4-205ENST00000474254 SH3TC1Q8TE82 1336 aa21.01■□□□□ 0.95
CPA4-205ENST00000474254 TRPM7Q96QT4 1865 aa21.01■□□□□ 0.95
CPA4-205ENST00000474254 RASSF10A6NK89 507 aa21■□□□□ 0.95
CPA4-205ENST00000474254 BBOX1O75936 387 aa21■□□□□ 0.95
CPA4-205ENST00000474254 CTCFP49711 727 aaPredicted RBP21■□□□□ 0.95
CPA4-205ENST00000474254 CCDC30Q5VVM6 783 aa21■□□□□ 0.95
CPA4-205ENST00000474254 DPP8Q6V1X1 898 aaPredicted RBP21■□□□□ 0.95
CPA4-205ENST00000474254 USP50Q70EL3 339 aaPredicted RBP21■□□□□ 0.95
CPA4-205ENST00000474254 DDX46Q7L014 1031 aaKnown RBP21■□□□□ 0.95
CPA4-205ENST00000474254 LRRC37AA6NMS7 1700 aa21■□□□□ 0.95
CPA4-205ENST00000474254 HCLS1P14317 486 aaPredicted RBP20.99■□□□□ 0.95
CPA4-205ENST00000474254 GOLGA2Q08379 1002 aa20.99■□□□□ 0.95
CPA4-205ENST00000474254 PHAXQ9H814 394 aaKnown RBP20.99■□□□□ 0.95
CPA4-205ENST00000474254 PRDM10Q9NQV6 1147 aa20.99■□□□□ 0.95
CPA4-205ENST00000474254 MYH3P11055 1940 aa20.99■□□□□ 0.95
CPA4-205ENST00000474254 SP8Q8IXZ3 490 aa20.98■□□□□ 0.95
CPA4-205ENST00000474254 MPNDQ8N594 471 aa20.98■□□□□ 0.95
CPA4-205ENST00000474254 ZNRF3Q9ULT6 936 aa20.98■□□□□ 0.95
CPA4-205ENST00000474254 FANCIQ9NVI1 1328 aa20.98■□□□□ 0.95
CPA4-205ENST00000474254 PAXIP1Q6ZW49 1069 aaPredicted RBP20.97■□□□□ 0.95
CPA4-205ENST00000474254 FAM9BQ8IZU0 186 aa20.97■□□□□ 0.95
CPA4-205ENST00000474254 RTFDC1Q9BY42 306 aaPredicted RBP20.97■□□□□ 0.95
CPA4-205ENST00000474254 ADARB2Q9NS39 739 aaKnown RBP20.97■□□□□ 0.95
CPA4-205ENST00000474254 WDR33Q9C0J8 1336 aaKnown RBP20.97■□□□□ 0.95
CPA4-205ENST00000474254 ATP5J2-PTCD1G3V325 749 aa20.96■□□□□ 0.95
CPA4-205ENST00000474254 TRIM28Q13263 835 aaKnown RBP20.96■□□□□ 0.95
CPA4-205ENST00000474254 GRAPQ13588 217 aa20.96■□□□□ 0.95
CPA4-205ENST00000474254 TWISTNBQ3B726 338 aaPredicted RBP20.96■□□□□ 0.95
CPA4-205ENST00000474254 WDR63Q8IWG1 891 aa20.96■□□□□ 0.95
CPA4-205ENST00000474254 GRAPLQ8TC17 118 aaPredicted RBP20.96■□□□□ 0.95
CPA4-205ENST00000474254 GPRC5DQ9NZD1 345 aa20.96■□□□□ 0.95
CPA4-205ENST00000474254 MAP2K1Q02750 393 aaPredicted RBP20.95■□□□□ 0.94
CPA4-205ENST00000474254 CXCL9Q07325 125 aa20.95■□□□□ 0.94
CPA4-205ENST00000474254 RIC3Q7Z5B4 369 aa20.95■□□□□ 0.94
CPA4-205ENST00000474254 WBP1LQ9NX94 342 aa20.95■□□□□ 0.94
CPA4-205ENST00000474254 ECE1P42892 770 aa20.94■□□□□ 0.94
CPA4-205ENST00000474254 CIAPIN1Q6FI81 312 aa20.94■□□□□ 0.94
CPA4-205ENST00000474254 TMC4Q7Z404 712 aa20.94■□□□□ 0.94
CPA4-205ENST00000474254 ZNF428Q96B54 188 aa20.94■□□□□ 0.94
CPA4-205ENST00000474254 BCL2L13Q9BXK5 485 aa20.94■□□□□ 0.94
CPA4-205ENST00000474254 SALL2Q9Y467 1007 aaPredicted RBP20.94■□□□□ 0.94
CPA4-205ENST00000474254 GMPSP49915 693 aaPredicted RBP20.93■□□□□ 0.94
CPA4-205ENST00000474254 KIAA2012Q0VF49 1180 aa20.93■□□□□ 0.94
CPA4-205ENST00000474254 TNIP1Q15025 636 aa20.93■□□□□ 0.94
CPA4-205ENST00000474254 STK31Q9BXU1 1019 aa20.93■□□□□ 0.94
CPA4-205ENST00000474254 DDX58O95786 925 aaKnown RBP20.92■□□□□ 0.94
CPA4-205ENST00000474254 LBX1P52954 281 aa20.92■□□□□ 0.94
CPA4-205ENST00000474254 FMR1Q06787 632 aaKnown RBP eCLIP20.92■□□□□ 0.94
CPA4-205ENST00000474254 GRM1Q13255 1194 aa20.92■□□□□ 0.94
CPA4-205ENST00000474254 FAM89AQ96GI7 184 aa20.92■□□□□ 0.94
CPA4-205ENST00000474254 CDHR2Q9BYE9 1310 aa20.92■□□□□ 0.94
CPA4-205ENST00000474254 THSD7BQ9C0I4 1608 aa20.92■□□□□ 0.94
CPA4-205ENST00000474254 COL4A1P02462 1669 aa20.92■□□□□ 0.94
CPA4-205ENST00000474254 TRAF5O00463 557 aa20.91■□□□□ 0.94
CPA4-205ENST00000474254 RAD17O75943 681 aa20.91■□□□□ 0.94
CPA4-205ENST00000474254 CAPNS2Q96L46 248 aa20.91■□□□□ 0.94
CPA4-205ENST00000474254 MYD88Q99836 296 aa20.91■□□□□ 0.94
CPA4-205ENST00000474254 BEGAINQ9BUH8 593 aa20.9■□□□□ 0.94
CPA4-205ENST00000474254 METTL22Q9BUU2 404 aaPredicted RBP20.9■□□□□ 0.94
CPA4-205ENST00000474254 DUOX1Q9NRD9 1551 aa20.89■□□□□ 0.94
CPA4-205ENST00000474254 ZBTB38Q8NAP3 1195 aaPredicted RBP20.89■□□□□ 0.93
CPA4-205ENST00000474254 CCDC191Q8NCU4 936 aa20.89■□□□□ 0.93
CPA4-205ENST00000474254 TLL2Q9Y6L7 1015 aa20.89■□□□□ 0.93
CPA4-205ENST00000474254 SPEF2Q9C093 1822 aa20.88■□□□□ 0.93
CPA4-205ENST00000474254 ZNF521Q96K83 1311 aa20.88■□□□□ 0.93
CPA4-205ENST00000474254 HSPA8P11142 646 aaKnown RBP20.88■□□□□ 0.93
CPA4-205ENST00000474254 SF3B3Q15393 1217 aaKnown RBP20.88■□□□□ 0.93
CPA4-205ENST00000474254 RTL5Q5HYW3 569 aaPredicted RBP20.88■□□□□ 0.93
CPA4-205ENST00000474254 CYP4F22Q6NT55 531 aa20.88■□□□□ 0.93
CPA4-205ENST00000474254 KSR2Q6VAB6 950 aa20.88■□□□□ 0.93
CPA4-205ENST00000474254 SPINK5Q9NQ38 1064 aaPredicted RBP20.88■□□□□ 0.93
CPA4-205ENST00000474254 MAP3K2Q9Y2U5 619 aa20.88■□□□□ 0.93
CPA4-205ENST00000474254 PI4KAP2A4QPH2 592 aa20.87■□□□□ 0.93
CPA4-205ENST00000474254 IRS4O14654 1257 aaPredicted RBP20.87■□□□□ 0.93
CPA4-205ENST00000474254 CELF2O95319 508 aaKnown RBP20.87■□□□□ 0.93
CPA4-205ENST00000474254 CST9Q5W186 159 aa20.87■□□□□ 0.93
CPA4-205ENST00000474254 G2E3Q7L622 706 aa20.87■□□□□ 0.93
CPA4-205ENST00000474254 PI4KAP1Q8N8J0 262 aa20.87■□□□□ 0.93
CPA4-205ENST00000474254 CWC25Q9NXE8 425 aaPredicted RBP20.87■□□□□ 0.93
CPA4-205ENST00000474254 H7C1D1 291 aa20.86■□□□□ 0.93
CPA4-205ENST00000474254 SLC4A2P04920 1241 aa20.86■□□□□ 0.93
CPA4-205ENST00000474254 PCCAP05165 728 aaPredicted RBP20.86■□□□□ 0.93
CPA4-205ENST00000474254 EXOSC9Q06265 439 aaKnown RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms