RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 SF3B3Q15393 1217 aaKnown RBP23.81■■□□□ 1.4
CCDC171-206ENST00000474193 PI4KAP1Q8N8J0 262 aa23.81■■□□□ 1.4
CCDC171-206ENST00000474193 PCCAP05165 728 aaPredicted RBP23.8■■□□□ 1.4
CCDC171-206ENST00000474193 EXOSC9Q06265 439 aaKnown RBP23.8■■□□□ 1.4
CCDC171-206ENST00000474193 DPP8Q6V1X1 898 aaPredicted RBP23.8■■□□□ 1.4
CCDC171-206ENST00000474193 MPNDQ8N594 471 aa23.8■■□□□ 1.4
CCDC171-206ENST00000474193 FZD9O00144 591 aa23.78■■□□□ 1.4
CCDC171-206ENST00000474193 PPIP5K2O43314 1243 aa23.78■■□□□ 1.4
CCDC171-206ENST00000474193 NIM1KQ8IY84 436 aa23.78■■□□□ 1.4
CCDC171-206ENST00000474193 WDR90Q96KV7 1748 aa23.77■■□□□ 1.4
CCDC171-206ENST00000474193 PDE8AO60658 829 aa23.77■■□□□ 1.4
CCDC171-206ENST00000474193 VAMP4O75379 141 aa23.77■■□□□ 1.4
CCDC171-206ENST00000474193 FKBP5Q13451 457 aaPredicted RBP23.77■■□□□ 1.4
CCDC171-206ENST00000474193 CCDC152Q4G0S7 254 aa23.77■■□□□ 1.4
CCDC171-206ENST00000474193 FLIIQ13045 1269 aa23.76■■□□□ 1.39
CCDC171-206ENST00000474193 GPC2Q8N158 579 aa23.76■■□□□ 1.39
CCDC171-206ENST00000474193 POTECB2RU33 542 aa23.75■■□□□ 1.39
CCDC171-206ENST00000474193 L3MBTL3Q96JM7 780 aaPredicted RBP23.75■■□□□ 1.39
CCDC171-206ENST00000474193 HACL1Q9UJ83 578 aa23.75■■□□□ 1.39
CCDC171-206ENST00000474193 LAMB2P55268 1798 aa23.75■■□□□ 1.39
CCDC171-206ENST00000474193 RPS8P62241 208 aaKnown RBP23.74■■□□□ 1.39
CCDC171-206ENST00000474193 G2E3Q7L622 706 aa23.74■■□□□ 1.39
CCDC171-206ENST00000474193 RTFDC1Q9BY42 306 aaPredicted RBP23.74■■□□□ 1.39
CCDC171-206ENST00000474193 GJA3Q9Y6H8 435 aa23.74■■□□□ 1.39
CCDC171-206ENST00000474193 CACNA1FO60840 1977 aa23.73■■□□□ 1.39
CCDC171-206ENST00000474193 LMOD1P29536 600 aaPredicted RBP23.73■■□□□ 1.39
CCDC171-206ENST00000474193 NSFL1CQ9UNZ2 370 aaKnown RBP23.73■■□□□ 1.39
CCDC171-206ENST00000474193 AOC3Q16853 763 aa23.72■■□□□ 1.39
CCDC171-206ENST00000474193 PNMA8AQ86V59 439 aaPredicted RBP23.72■■□□□ 1.39
CCDC171-206ENST00000474193 DNAAF4Q8WXU2 420 aa23.72■■□□□ 1.39
CCDC171-206ENST00000474193 CELF1Q92879 486 aaKnown RBP23.72■■□□□ 1.39
CCDC171-206ENST00000474193 CDHR2Q9BYE9 1310 aa23.72■■□□□ 1.39
CCDC171-206ENST00000474193 ZNF541Q9H0D2 1346 aa23.72■■□□□ 1.39
CCDC171-206ENST00000474193 SNED1Q8TER0 1413 aa23.72■■□□□ 1.39
CCDC171-206ENST00000474193 CHADLQ6NUI6 762 aa23.71■■□□□ 1.39
CCDC171-206ENST00000474193 JARID2Q92833 1246 aaPredicted RBP23.71■■□□□ 1.39
CCDC171-206ENST00000474193 ZNRF3Q9ULT6 936 aa23.71■■□□□ 1.39
CCDC171-206ENST00000474193 CLEC11AQ9Y240 323 aa23.71■■□□□ 1.39
CCDC171-206ENST00000474193 DDX60Q8IY21 1712 aaKnown RBP23.7■■□□□ 1.39
CCDC171-206ENST00000474193 ZNF521Q96K83 1311 aa23.7■■□□□ 1.38
CCDC171-206ENST00000474193 NEURL1BA8MQ27 555 aa23.7■■□□□ 1.38
CCDC171-206ENST00000474193 C6orf229H3BNL8 230 aa23.7■■□□□ 1.38
CCDC171-206ENST00000474193 IGKV5-2P06315 115 aa23.7■■□□□ 1.38
CCDC171-206ENST00000474193 EYA3Q99504 573 aa23.7■■□□□ 1.38
CCDC171-206ENST00000474193 TAF1DQ9H5J8 278 aaPredicted RBP23.7■■□□□ 1.38
CCDC171-206ENST00000474193 SPINK5Q9NQ38 1064 aaPredicted RBP23.7■■□□□ 1.38
CCDC171-206ENST00000474193 SCN4AP35499 1836 aa23.69■■□□□ 1.38
CCDC171-206ENST00000474193 KIAA2012Q0VF49 1180 aa23.69■■□□□ 1.38
CCDC171-206ENST00000474193 CWF19L2Q2TBE0 894 aaKnown RBP23.69■■□□□ 1.38
CCDC171-206ENST00000474193 EAPPQ56P03 285 aaPredicted RBP23.69■■□□□ 1.38
CCDC171-206ENST00000474193 E9PSI1 815 aa23.68■■□□□ 1.38
CCDC171-206ENST00000474193 EPHX2P34913 555 aa23.68■■□□□ 1.38
CCDC171-206ENST00000474193 WASHC4Q2M389 1173 aa23.68■■□□□ 1.38
CCDC171-206ENST00000474193 LDHDQ86WU2 507 aa23.68■■□□□ 1.38
CCDC171-206ENST00000474193 ANKRD18AQ8IVF6 992 aa23.68■■□□□ 1.38
CCDC171-206ENST00000474193 LINS1Q8NG48 757 aa23.68■■□□□ 1.38
CCDC171-206ENST00000474193 CDC5LQ99459 802 aaKnown RBP23.68■■□□□ 1.38
CCDC171-206ENST00000474193 G3V3G9 751 aa23.67■■□□□ 1.38
CCDC171-206ENST00000474193 TNIP1Q15025 636 aa23.67■■□□□ 1.38
CCDC171-206ENST00000474193 DCAF8Q5TAQ9 597 aa23.67■■□□□ 1.38
CCDC171-206ENST00000474193 ANKIB1Q9P2G1 1089 aa23.67■■□□□ 1.38
CCDC171-206ENST00000474193 CTSWP56202 376 aa23.66■■□□□ 1.38
CCDC171-206ENST00000474193 UBE3BQ7Z3V4 1068 aa23.66■■□□□ 1.38
CCDC171-206ENST00000474193 CCDC85AQ96PX6 553 aaPredicted RBP23.66■■□□□ 1.38
CCDC171-206ENST00000474193 SEC31BQ9NQW1 1179 aa23.66■■□□□ 1.38
CCDC171-206ENST00000474193 TAF1P21675 1872 aa23.66■■□□□ 1.38
CCDC171-206ENST00000474193 ZBED9Q6R2W3 1325 aa23.65■■□□□ 1.38
CCDC171-206ENST00000474193 H7C1W4 665 aa23.65■■□□□ 1.38
CCDC171-206ENST00000474193 GCKRQ14397 625 aa23.65■■□□□ 1.38
CCDC171-206ENST00000474193 CIAPIN1Q6FI81 312 aa23.65■■□□□ 1.38
CCDC171-206ENST00000474193 ZC3H12CQ9C0D7 883 aaKnown RBP23.65■■□□□ 1.38
CCDC171-206ENST00000474193 SLC51AQ86UW1 340 aa23.64■■□□□ 1.37
CCDC171-206ENST00000474193 YTHDC1Q96MU7 727 aaKnown RBP23.64■■□□□ 1.37
CCDC171-206ENST00000474193 RIMBP2O15034 1052 aa23.63■■□□□ 1.37
CCDC171-206ENST00000474193 GPSM2P81274 684 aa23.63■■□□□ 1.37
CCDC171-206ENST00000474193 CXCL9Q07325 125 aa23.63■■□□□ 1.37
CCDC171-206ENST00000474193 TTLL11Q8NHH1 800 aa23.63■■□□□ 1.37
CCDC171-206ENST00000474193 BCL2L13Q9BXK5 485 aa23.63■■□□□ 1.37
CCDC171-206ENST00000474193 SLFN5Q08AF3 891 aa23.62■■□□□ 1.37
CCDC171-206ENST00000474193 GGA1Q9UJY5 639 aa23.62■■□□□ 1.37
CCDC171-206ENST00000474193 PODXL2Q9NZ53 605 aa23.61■■□□□ 1.37
CCDC171-206ENST00000474193 POTEIP0CG38 1075 aa23.6■■□□□ 1.37
CCDC171-206ENST00000474193 POTEJP0CG39 1038 aa23.6■■□□□ 1.37
CCDC171-206ENST00000474193 IGHMBP2P38935 993 aaKnown RBP23.6■■□□□ 1.37
CCDC171-206ENST00000474193 USP50Q70EL3 339 aaPredicted RBP23.6■■□□□ 1.37
CCDC171-206ENST00000474193 TBC1D16Q8TBP0 767 aa23.6■■□□□ 1.37
CCDC171-206ENST00000474193 CDCA7LQ96GN5 454 aa23.6■■□□□ 1.37
CCDC171-206ENST00000474193 PLA2G12BQ9BX93 195 aa23.6■■□□□ 1.37
CCDC171-206ENST00000474193 POLLQ9UGP5 575 aa23.6■■□□□ 1.37
CCDC171-206ENST00000474193 F6X3S4 739 aa23.59■■□□□ 1.37
CCDC171-206ENST00000474193 RAD17O75943 681 aa23.59■■□□□ 1.37
CCDC171-206ENST00000474193 UFL1O94874 794 aa23.59■■□□□ 1.37
CCDC171-206ENST00000474193 SLC4A10Q6U841 1118 aa23.59■■□□□ 1.37
CCDC171-206ENST00000474193 C9orf78Q9NZ63 289 aaPredicted RBP23.59■■□□□ 1.37
CCDC171-206ENST00000474193 XDHP47989 1333 aa23.59■■□□□ 1.37
CCDC171-206ENST00000474193 COL4A5P29400 1685 aa23.58■■□□□ 1.37
CCDC171-206ENST00000474193 SCNN1DP51172 638 aa23.58■■□□□ 1.37
CCDC171-206ENST00000474193 DNAJC5GQ8N7S2 189 aa23.58■■□□□ 1.37
CCDC171-206ENST00000474193 MPHOSPH8Q99549 860 aa23.58■■□□□ 1.37
CCDC171-206ENST00000474193 GREM2Q9H772 168 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms