RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 RNF181Q9P0P0 153 aa17.38■□□□□ 0.37
USF1-205ENST00000473969 CTSWP56202 376 aa17.37■□□□□ 0.37
USF1-205ENST00000473969 FRAT1Q92837 279 aaPredicted RBP17.37■□□□□ 0.37
USF1-205ENST00000473969 CCDC85AQ96PX6 553 aaPredicted RBP17.37■□□□□ 0.37
USF1-205ENST00000473969 NFKBIEO00221 500 aa17.36■□□□□ 0.37
USF1-205ENST00000473969 GRM8O00222 908 aa17.36■□□□□ 0.37
USF1-205ENST00000473969 FKBP4Q02790 459 aaKnown RBP eCLIP17.36■□□□□ 0.37
USF1-205ENST00000473969 ARHGAP45Q92619 1136 aa17.36■□□□□ 0.37
USF1-205ENST00000473969 ATP6V0A2Q9Y487 856 aa17.36■□□□□ 0.37
USF1-205ENST00000473969 CHD4Q14839 1912 aa17.36■□□□□ 0.37
USF1-205ENST00000473969 SLX4Q8IY92 1834 aa17.35■□□□□ 0.37
USF1-205ENST00000473969 CCT4P50991 539 aaKnown RBP17.35■□□□□ 0.37
USF1-205ENST00000473969 RPS8P62241 208 aaKnown RBP17.35■□□□□ 0.37
USF1-205ENST00000473969 SP8Q8IXZ3 490 aa17.35■□□□□ 0.37
USF1-205ENST00000473969 CDC5LQ99459 802 aaKnown RBP17.35■□□□□ 0.37
USF1-205ENST00000473969 PLA2G12BQ9BX93 195 aa17.35■□□□□ 0.37
USF1-205ENST00000473969 LTBP3Q9NS15 1303 aa17.35■□□□□ 0.37
USF1-205ENST00000473969 BCAR3O75815 825 aa17.34■□□□□ 0.37
USF1-205ENST00000473969 OLFM4Q6UX06 510 aa17.34■□□□□ 0.37
USF1-205ENST00000473969 ANKRD18AQ8IVF6 992 aa17.34■□□□□ 0.37
USF1-205ENST00000473969 YTHDC1Q96MU7 727 aaKnown RBP17.34■□□□□ 0.37
USF1-205ENST00000473969 DPP8Q6V1X1 898 aaPredicted RBP17.33■□□□□ 0.36
USF1-205ENST00000473969 MPNDQ8N594 471 aa17.33■□□□□ 0.36
USF1-205ENST00000473969 SUPT20HQ8NEM7 779 aa17.33■□□□□ 0.36
USF1-205ENST00000473969 TTLL11Q8NHH1 800 aa17.33■□□□□ 0.36
USF1-205ENST00000473969 CELF1Q92879 486 aaKnown RBP17.33■□□□□ 0.36
USF1-205ENST00000473969 SEC31BQ9NQW1 1179 aa17.33■□□□□ 0.36
USF1-205ENST00000473969 CHMP3Q9Y3E7 222 aa17.33■□□□□ 0.36
USF1-205ENST00000473969 CACNA1SQ13698 1873 aa17.33■□□□□ 0.36
USF1-205ENST00000473969 CASP7P55210 303 aa17.32■□□□□ 0.36
USF1-205ENST00000473969 ZKSCAN2Q63HK3 967 aa17.32■□□□□ 0.36
USF1-205ENST00000473969 PSMD1Q99460 953 aa17.32■□□□□ 0.36
USF1-205ENST00000473969 HDAC5Q9UQL6 1122 aa17.32■□□□□ 0.36
USF1-205ENST00000473969 DDX60Q8IY21 1712 aaKnown RBP17.32■□□□□ 0.36
USF1-205ENST00000473969 IGHMBP2P38935 993 aaKnown RBP17.31■□□□□ 0.36
USF1-205ENST00000473969 ATF7IPQ6VMQ6 1270 aa17.31■□□□□ 0.36
USF1-205ENST00000473969 ZNF784Q8NCA9 323 aaPredicted RBP17.31■□□□□ 0.36
USF1-205ENST00000473969 GREM2Q9H772 168 aa17.31■□□□□ 0.36
USF1-205ENST00000473969 ZNF277Q9NRM2 450 aaPredicted RBP17.31■□□□□ 0.36
USF1-205ENST00000473969 ZC3H4Q9UPT8 1303 aaKnown RBP17.3■□□□□ 0.36
USF1-205ENST00000473969 GOLGB1Q14789 3259 aaKnown RBP17.3■□□□□ 0.36
USF1-205ENST00000473969 ANKRD18BA2A2Z9 1011 aa17.3■□□□□ 0.36
USF1-205ENST00000473969 CSF1RP07333 972 aa17.3■□□□□ 0.36
USF1-205ENST00000473969 ITGA6P23229 1130 aa17.3■□□□□ 0.36
USF1-205ENST00000473969 TAF7LQ5H9L4 462 aa17.3■□□□□ 0.36
USF1-205ENST00000473969 JDP2Q8WYK2 163 aa17.3■□□□□ 0.36
USF1-205ENST00000473969 NSFL1CQ9UNZ2 370 aaKnown RBP17.3■□□□□ 0.36
USF1-205ENST00000473969 LAMB2P55268 1798 aa17.3■□□□□ 0.36
USF1-205ENST00000473969 IARSP41252 1262 aaKnown RBP17.29■□□□□ 0.36
USF1-205ENST00000473969 IFIT5Q13325 482 aaKnown RBP17.29■□□□□ 0.36
USF1-205ENST00000473969 CCDC57Q2TAC2 916 aa17.29■□□□□ 0.36
USF1-205ENST00000473969 DPY19L2Q6NUT2 758 aa17.29■□□□□ 0.36
USF1-205ENST00000473969 LMBR1LQ6UX01 489 aa17.29■□□□□ 0.36
USF1-205ENST00000473969 FTSJ3Q8IY81 847 aaKnown RBP17.29■□□□□ 0.36
USF1-205ENST00000473969 ZNF526Q8TF50 670 aaPredicted RBP17.29■□□□□ 0.36
USF1-205ENST00000473969 MPHOSPH8Q99549 860 aa17.29■□□□□ 0.36
USF1-205ENST00000473969 GPBP1L1Q9HC44 474 aaPredicted RBP17.29■□□□□ 0.36
USF1-205ENST00000473969 RTL9Q8NET4 1388 aa17.28■□□□□ 0.36
USF1-205ENST00000473969 UTYO14607 1347 aa17.28■□□□□ 0.36
USF1-205ENST00000473969 UTRNP46939 3433 aa17.28■□□□□ 0.36
USF1-205ENST00000473969 NBPF7P0C2Y1 421 aaPredicted RBP17.28■□□□□ 0.36
USF1-205ENST00000473969 UBTFL1P0CB47 393 aaPredicted RBP17.28■□□□□ 0.36
USF1-205ENST00000473969 FOXO4P98177 505 aa17.28■□□□□ 0.36
USF1-205ENST00000473969 LARGE2Q8N3Y3 721 aa17.28■□□□□ 0.36
USF1-205ENST00000473969 CLUAP1Q96AJ1 413 aa17.28■□□□□ 0.36
USF1-205ENST00000473969 SUCLG2Q96I99 432 aa17.28■□□□□ 0.36
USF1-205ENST00000473969 VPS33BQ9H267 617 aa17.28■□□□□ 0.36
USF1-205ENST00000473969 ANKIB1Q9P2G1 1089 aa17.28■□□□□ 0.36
USF1-205ENST00000473969 KDM2BQ8NHM5 1336 aa17.27■□□□□ 0.36
USF1-205ENST00000473969 C6orf229H3BNL8 230 aa17.27■□□□□ 0.36
USF1-205ENST00000473969 PPIP5K2O43314 1243 aa17.27■□□□□ 0.36
USF1-205ENST00000473969 TRIM27P14373 513 aa17.27■□□□□ 0.36
USF1-205ENST00000473969 PRELPP51888 382 aa17.27■□□□□ 0.36
USF1-205ENST00000473969 FAM161AQ3B820 660 aa17.27■□□□□ 0.36
USF1-205ENST00000473969 USP44Q9H0E7 712 aa17.27■□□□□ 0.36
USF1-205ENST00000473969 BSDC1Q9NW68 430 aaPredicted RBP17.27■□□□□ 0.36
USF1-205ENST00000473969 MS4A1P11836 297 aa17.26■□□□□ 0.35
USF1-205ENST00000473969 INTS3Q68E01 1043 aaKnown RBP17.26■□□□□ 0.35
USF1-205ENST00000473969 EYA3Q99504 573 aa17.26■□□□□ 0.35
USF1-205ENST00000473969 RTFDC1Q9BY42 306 aaPredicted RBP17.26■□□□□ 0.35
USF1-205ENST00000473969 RCAN3Q9UKA8 241 aa17.26■□□□□ 0.35
USF1-205ENST00000473969 FER1L6Q2WGJ9 1857 aa17.26■□□□□ 0.35
USF1-205ENST00000473969 GNAI3P08754 354 aa17.25■□□□□ 0.35
USF1-205ENST00000473969 GPSM2P81274 684 aa17.25■□□□□ 0.35
USF1-205ENST00000473969 EPHA10Q5JZY3 1008 aa17.25■□□□□ 0.35
USF1-205ENST00000473969 NIM1KQ8IY84 436 aa17.25■□□□□ 0.35
USF1-205ENST00000473969 DZIP1LQ8IYY4 767 aaKnown RBP17.25■□□□□ 0.35
USF1-205ENST00000473969 GGA1Q9UJY5 639 aa17.25■□□□□ 0.35
USF1-205ENST00000473969 G3V3G9 751 aa17.24■□□□□ 0.35
USF1-205ENST00000473969 EIF6P56537 245 aaKnown RBP17.24■□□□□ 0.35
USF1-205ENST00000473969 AOC3Q16853 763 aa17.24■□□□□ 0.35
USF1-205ENST00000473969 WASHC4Q2M389 1173 aa17.24■□□□□ 0.35
USF1-205ENST00000473969 DCAF8Q5TAQ9 597 aa17.24■□□□□ 0.35
USF1-205ENST00000473969 ANKRD2Q9GZV1 360 aa17.24■□□□□ 0.35
USF1-205ENST00000473969 BICC1Q9H694 974 aaKnown RBP17.24■□□□□ 0.35
USF1-205ENST00000473969 XDHP47989 1333 aa17.23■□□□□ 0.35
USF1-205ENST00000473969 GLTPD2A6NH11 291 aa17.23■□□□□ 0.35
USF1-205ENST00000473969 UFL1O94874 794 aa17.23■□□□□ 0.35
USF1-205ENST00000473969 SLC51AQ86UW1 340 aa17.23■□□□□ 0.35
USF1-205ENST00000473969 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms