RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 RAB44Q7Z6P3 723 aaPredicted RBP4.06□□□□□ -1.76
CALD1-216ENST00000473714 IGFLR1Q9H665 355 aa4.06□□□□□ -1.76
CALD1-216ENST00000473714 PARP3Q9Y6F1 533 aa4.06□□□□□ -1.76
CALD1-216ENST00000473714 SETD1BQ9UPS6 1966 aaKnown RBP4.05□□□□□ -1.76
CALD1-216ENST00000473714 CD109Q6YHK3 1445 aa4.05□□□□□ -1.76
CALD1-216ENST00000473714 APBB1O00213 710 aa4.05□□□□□ -1.76
CALD1-216ENST00000473714 RGS9O75916 674 aaPredicted RBP4.05□□□□□ -1.76
CALD1-216ENST00000473714 MED26O95402 600 aa4.05□□□□□ -1.76
CALD1-216ENST00000473714 RANGAP1P46060 587 aaPredicted RBP4.05□□□□□ -1.76
CALD1-216ENST00000473714 AFF1P51825 1210 aaKnown RBP4.05□□□□□ -1.76
CALD1-216ENST00000473714 SLFNL1Q499Z3 407 aa4.05□□□□□ -1.76
CALD1-216ENST00000473714 ZNF295-AS1Q8N0V1 137 aa4.05□□□□□ -1.76
CALD1-216ENST00000473714 DTWD1Q8N5C7 304 aa4.05□□□□□ -1.76
CALD1-216ENST00000473714 MTMR14Q8NCE2 650 aa4.05□□□□□ -1.76
CALD1-216ENST00000473714 MEGF10Q96KG7 1140 aa4.05□□□□□ -1.76
CALD1-216ENST00000473714 PODXL2Q9NZ53 605 aa4.05□□□□□ -1.76
CALD1-216ENST00000473714 TTC37Q6PGP7 1564 aa4.05□□□□□ -1.76
CALD1-216ENST00000473714 FHAD1B1AJZ9 1412 aa4.04□□□□□ -1.76
CALD1-216ENST00000473714 KIAA1324LA8MWY0 1029 aaPredicted RBP4.04□□□□□ -1.76
CALD1-216ENST00000473714 GSC2O15499 205 aa4.04□□□□□ -1.76
CALD1-216ENST00000473714 UBTFP17480 764 aaKnown RBP4.04□□□□□ -1.76
CALD1-216ENST00000473714 TXLNAP40222 546 aa4.04□□□□□ -1.76
CALD1-216ENST00000473714 MTFR1Q15390 333 aa4.04□□□□□ -1.76
CALD1-216ENST00000473714 PSAPL1Q6NUJ1 521 aa4.04□□□□□ -1.76
CALD1-216ENST00000473714 IGF2-ASQ6U949 168 aa4.04□□□□□ -1.76
CALD1-216ENST00000473714 FBXO11Q86XK2 927 aa4.04□□□□□ -1.76
CALD1-216ENST00000473714 SLC4A9Q96Q91 983 aa4.04□□□□□ -1.76
CALD1-216ENST00000473714 UBE2OQ9C0C9 1292 aaKnown RBP4.04□□□□□ -1.76
CALD1-216ENST00000473714 SLC6A14Q9UN76 642 aa4.04□□□□□ -1.76
CALD1-216ENST00000473714 IQSEC3Q9UPP2 1182 aaPredicted RBP4.04□□□□□ -1.76
CALD1-216ENST00000473714 TOP2AP11388 1531 aaKnown RBP4.04□□□□□ -1.76
CALD1-216ENST00000473714 FER1L4A9Z1Z3 1794 aa4.04□□□□□ -1.76
CALD1-216ENST00000473714 UHRF1BP1LA0JNW5 1464 aa4.04□□□□□ -1.76
CALD1-216ENST00000473714 PTPRGP23470 1445 aa4.04□□□□□ -1.76
CALD1-216ENST00000473714 NCOA1Q15788 1441 aa4.04□□□□□ -1.76
CALD1-216ENST00000473714 POGZQ7Z3K3 1410 aa4.04□□□□□ -1.76
CALD1-216ENST00000473714 SETBP1Q9Y6X0 1596 aa4.03□□□□□ -1.76
CALD1-216ENST00000473714 ARID3CA6NKF2 412 aa4.03□□□□□ -1.76
CALD1-216ENST00000473714 YY1P25490 414 aa4.03□□□□□ -1.76
CALD1-216ENST00000473714 BHMTQ93088 406 aa4.03□□□□□ -1.76
CALD1-216ENST00000473714 CEP63Q96MT8 703 aa4.03□□□□□ -1.76
CALD1-216ENST00000473714 KRTAP4-11Q9BYQ6 195 aa4.03□□□□□ -1.76
CALD1-216ENST00000473714 KCNH4Q9UQ05 1017 aa4.03□□□□□ -1.76
CALD1-216ENST00000473714 GPC6Q9Y625 555 aaPredicted RBP4.03□□□□□ -1.76
CALD1-216ENST00000473714 USP3Q9Y6I4 520 aa4.03□□□□□ -1.76
CALD1-216ENST00000473714 RUSC2Q8N2Y8 1516 aa4.03□□□□□ -1.76
CALD1-216ENST00000473714 PTPRKQ15262 1439 aa4.03□□□□□ -1.76
CALD1-216ENST00000473714 PHLDB1Q86UU1 1377 aa4.02□□□□□ -1.77
CALD1-216ENST00000473714 CUX1P39880 1505 aa4.02□□□□□ -1.77
CALD1-216ENST00000473714 KDM5BQ9UGL1 1544 aa4.02□□□□□ -1.77
CALD1-216ENST00000473714 SIGLEC1Q9BZZ2 1709 aa4.02□□□□□ -1.77
CALD1-216ENST00000473714 RAD21O60216 631 aa4.02□□□□□ -1.77
CALD1-216ENST00000473714 GRIK1P39086 918 aa4.02□□□□□ -1.77
CALD1-216ENST00000473714 MSL1Q68DK7 614 aa4.02□□□□□ -1.77
CALD1-216ENST00000473714 INTS5Q6P9B9 1019 aaKnown RBP4.02□□□□□ -1.77
CALD1-216ENST00000473714 PHTF2Q8N3S3 785 aa4.02□□□□□ -1.77
CALD1-216ENST00000473714 L3MBTL2Q969R5 705 aa4.02□□□□□ -1.77
CALD1-216ENST00000473714 AKTIPQ9H8T0 292 aa4.02□□□□□ -1.77
CALD1-216ENST00000473714 BRD7Q9NPI1 651 aa4.02□□□□□ -1.77
CALD1-216ENST00000473714 ANKIB1Q9P2G1 1089 aa4.02□□□□□ -1.77
CALD1-216ENST00000473714 ABCA10Q8WWZ4 1543 aa4.01□□□□□ -1.77
CALD1-216ENST00000473714 CCDC88BA6NC98 1476 aa4.01□□□□□ -1.77
CALD1-216ENST00000473714 EML1O00423 815 aa4.01□□□□□ -1.77
CALD1-216ENST00000473714 BACH1O14867 736 aa4.01□□□□□ -1.77
CALD1-216ENST00000473714 RAPGEF3O95398 923 aa4.01□□□□□ -1.77
CALD1-216ENST00000473714 WNT11O96014 354 aa4.01□□□□□ -1.77
CALD1-216ENST00000473714 TGFB1P01137 390 aa4.01□□□□□ -1.77
CALD1-216ENST00000473714 IGLV1-40P01703 118 aa4.01□□□□□ -1.77
CALD1-216ENST00000473714 DZIP1LQ8IYY4 767 aaKnown RBP4.01□□□□□ -1.77
CALD1-216ENST00000473714 GOPCQ9HD26 462 aa4.01□□□□□ -1.77
CALD1-216ENST00000473714 SNRKQ9NRH2 765 aa4.01□□□□□ -1.77
CALD1-216ENST00000473714 ZNF232Q9UNY5 417 aa4.01□□□□□ -1.77
CALD1-216ENST00000473714 NDUFB9Q9Y6M9 179 aa4.01□□□□□ -1.77
CALD1-216ENST00000473714 KIAA0556O60303 1618 aa4.01□□□□□ -1.77
CALD1-216ENST00000473714 TTBK1Q5TCY1 1321 aaPredicted RBP4□□□□□ -1.77
CALD1-216ENST00000473714 ZCCHC11Q5TAX3 1644 aaKnown RBP4□□□□□ -1.77
CALD1-216ENST00000473714 ALKQ9UM73 1620 aa4□□□□□ -1.77
CALD1-216ENST00000473714 SFI1A8K8P3 1242 aa4□□□□□ -1.77
CALD1-216ENST00000473714 TMEM229AB2RXF0 380 aa4□□□□□ -1.77
CALD1-216ENST00000473714 PDIA4P13667 645 aaKnown RBP4□□□□□ -1.77
CALD1-216ENST00000473714 NOS2P35228 1153 aa4□□□□□ -1.77
CALD1-216ENST00000473714 CEBPAP49715 358 aaPredicted RBP4□□□□□ -1.77
CALD1-216ENST00000473714 KCNQ4P56696 695 aa4□□□□□ -1.77
CALD1-216ENST00000473714 EIF4G2P78344 907 aaKnown RBP eCLIP4□□□□□ -1.77
CALD1-216ENST00000473714 TEAD4Q15561 434 aa4□□□□□ -1.77
CALD1-216ENST00000473714 WFDC8Q8IUA0 241 aa4□□□□□ -1.77
CALD1-216ENST00000473714 RHPN1Q8TCX5 695 aa4□□□□□ -1.77
CALD1-216ENST00000473714 EFCC1Q9HA90 598 aa4□□□□□ -1.77
CALD1-216ENST00000473714 DNAJB12Q9NXW2 375 aaKnown RBP4□□□□□ -1.77
CALD1-216ENST00000473714 STOML1Q9UBI4 398 aa4□□□□□ -1.77
CALD1-216ENST00000473714 RAXQ9Y2V3 346 aa4□□□□□ -1.77
CALD1-216ENST00000473714 FANCAO15360 1455 aa3.99□□□□□ -1.77
CALD1-216ENST00000473714 UACAQ9BZF9 1416 aa3.99□□□□□ -1.77
CALD1-216ENST00000473714 ZBTB7CA1YPR0 619 aa3.99□□□□□ -1.77
CALD1-216ENST00000473714 ADAMTS4O75173 837 aa3.99□□□□□ -1.77
CALD1-216ENST00000473714 C8AP07357 584 aa3.99□□□□□ -1.77
CALD1-216ENST00000473714 PCSK7Q16549 785 aa3.99□□□□□ -1.77
CALD1-216ENST00000473714 OGFOD2Q6N063 350 aa3.99□□□□□ -1.77
CALD1-216ENST00000473714 ZDHHC1Q8WTX9 485 aa3.99□□□□□ -1.77
CALD1-216ENST00000473714 C7orf43Q8WVR3 580 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms