RNA–Protein interactions for RNA: ENST00000473522.1

RPUSD3-214, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-214ENST00000473522 TNRC6CQ9HCJ0 1690 aaKnown RBP22.45■■□□□ 1.18
RPUSD3-214ENST00000473522 COL11A2P13942 1736 aaPredicted RBP22.45■■□□□ 1.18
RPUSD3-214ENST00000473522 CCDC152Q4G0S7 254 aa22.44■■□□□ 1.18
RPUSD3-214ENST00000473522 ANKRD36CQ5JPF3 1778 aa22.44■■□□□ 1.18
RPUSD3-214ENST00000473522 SLC4A10Q6U841 1118 aa22.44■■□□□ 1.18
RPUSD3-214ENST00000473522 PSMD1Q99460 953 aa22.44■■□□□ 1.18
RPUSD3-214ENST00000473522 RNF181Q9P0P0 153 aa22.44■■□□□ 1.18
RPUSD3-214ENST00000473522 NOB1Q9ULX3 412 aaKnown RBP22.44■■□□□ 1.18
RPUSD3-214ENST00000473522 ARFGEF2Q9Y6D5 1785 aa22.44■■□□□ 1.18
RPUSD3-214ENST00000473522 SNED1Q8TER0 1413 aa22.43■■□□□ 1.18
RPUSD3-214ENST00000473522 CSF1RP07333 972 aa22.43■■□□□ 1.18
RPUSD3-214ENST00000473522 RPS8P62241 208 aaKnown RBP22.43■■□□□ 1.18
RPUSD3-214ENST00000473522 CELF1Q92879 486 aaKnown RBP22.43■■□□□ 1.18
RPUSD3-214ENST00000473522 CTSWP56202 376 aa22.42■■□□□ 1.18
RPUSD3-214ENST00000473522 ARFGEF1Q9Y6D6 1849 aa22.42■■□□□ 1.18
RPUSD3-214ENST00000473522 ZC3H4Q9UPT8 1303 aaKnown RBP22.41■■□□□ 1.18
RPUSD3-214ENST00000473522 GRM8O00222 908 aa22.41■■□□□ 1.18
RPUSD3-214ENST00000473522 API5Q9BZZ5 524 aaKnown RBP22.41■■□□□ 1.18
RPUSD3-214ENST00000473522 TMX4Q9H1E5 349 aaPredicted RBP22.41■■□□□ 1.18
RPUSD3-214ENST00000473522 SEC31BQ9NQW1 1179 aa22.41■■□□□ 1.18
RPUSD3-214ENST00000473522 SLX4Q8IY92 1834 aa22.41■■□□□ 1.18
RPUSD3-214ENST00000473522 UTYO14607 1347 aa22.4■■□□□ 1.18
RPUSD3-214ENST00000473522 RTFDC1Q9BY42 306 aaPredicted RBP22.4■■□□□ 1.18
RPUSD3-214ENST00000473522 SLC51AQ86UW1 340 aa22.39■■□□□ 1.17
RPUSD3-214ENST00000473522 C9orf78Q9NZ63 289 aaPredicted RBP22.39■■□□□ 1.17
RPUSD3-214ENST00000473522 RTL9Q8NET4 1388 aa22.38■■□□□ 1.17
RPUSD3-214ENST00000473522 BCAR3O75815 825 aa22.38■■□□□ 1.17
RPUSD3-214ENST00000473522 FOXO4P98177 505 aa22.38■■□□□ 1.17
RPUSD3-214ENST00000473522 VPS33BQ9H267 617 aa22.38■■□□□ 1.17
RPUSD3-214ENST00000473522 GREM2Q9H772 168 aa22.38■■□□□ 1.17
RPUSD3-214ENST00000473522 CACNA1FO60840 1977 aa22.38■■□□□ 1.17
RPUSD3-214ENST00000473522 KIF16BQ96L93 1317 aa22.37■■□□□ 1.17
RPUSD3-214ENST00000473522 IPO8O15397 1037 aaKnown RBP22.37■■□□□ 1.17
RPUSD3-214ENST00000473522 MPNDQ8N594 471 aa22.37■■□□□ 1.17
RPUSD3-214ENST00000473522 CCDC85AQ96PX6 553 aaPredicted RBP22.37■■□□□ 1.17
RPUSD3-214ENST00000473522 USP44Q9H0E7 712 aa22.37■■□□□ 1.17
RPUSD3-214ENST00000473522 ZNF277Q9NRM2 450 aaPredicted RBP22.37■■□□□ 1.17
RPUSD3-214ENST00000473522 NBPF7P0C2Y1 421 aaPredicted RBP22.36■■□□□ 1.17
RPUSD3-214ENST00000473522 CCT4P50991 539 aaKnown RBP22.36■■□□□ 1.17
RPUSD3-214ENST00000473522 IARSP41252 1262 aaKnown RBP22.35■■□□□ 1.17
RPUSD3-214ENST00000473522 EPHA10Q5JZY3 1008 aa22.35■■□□□ 1.17
RPUSD3-214ENST00000473522 KAZALD1Q96I82 304 aa22.35■■□□□ 1.17
RPUSD3-214ENST00000473522 CDC5LQ99459 802 aaKnown RBP22.35■■□□□ 1.17
RPUSD3-214ENST00000473522 DPP8Q6V1X1 898 aaPredicted RBP22.34■■□□□ 1.17
RPUSD3-214ENST00000473522 ANKRD18AQ8IVF6 992 aa22.34■■□□□ 1.17
RPUSD3-214ENST00000473522 SUPT20HQ8NEM7 779 aa22.34■■□□□ 1.17
RPUSD3-214ENST00000473522 BSDC1Q9NW68 430 aaPredicted RBP22.34■■□□□ 1.17
RPUSD3-214ENST00000473522 GLTPD2A6NH11 291 aa22.33■■□□□ 1.17
RPUSD3-214ENST00000473522 INTS3Q68E01 1043 aaKnown RBP22.33■■□□□ 1.17
RPUSD3-214ENST00000473522 ATF7IPQ6VMQ6 1270 aa22.33■■□□□ 1.17
RPUSD3-214ENST00000473522 PODXL2Q9NZ53 605 aa22.33■■□□□ 1.17
RPUSD3-214ENST00000473522 CHD4Q14839 1912 aa22.33■■□□□ 1.16
RPUSD3-214ENST00000473522 DDX60Q8IY21 1712 aaKnown RBP22.32■■□□□ 1.16
RPUSD3-214ENST00000473522 ITGA6P23229 1130 aa22.32■■□□□ 1.16
RPUSD3-214ENST00000473522 LMBR1LQ6UX01 489 aa22.32■■□□□ 1.16
RPUSD3-214ENST00000473522 SUCLG2Q96I99 432 aa22.32■■□□□ 1.16
RPUSD3-214ENST00000473522 GPBP1L1Q9HC44 474 aaPredicted RBP22.32■■□□□ 1.16
RPUSD3-214ENST00000473522 NSFL1CQ9UNZ2 370 aaKnown RBP22.32■■□□□ 1.16
RPUSD3-214ENST00000473522 FZD9O00144 591 aa22.31■■□□□ 1.16
RPUSD3-214ENST00000473522 GPSM2P81274 684 aa22.31■■□□□ 1.16
RPUSD3-214ENST00000473522 TRIM27P14373 513 aa22.3■■□□□ 1.16
RPUSD3-214ENST00000473522 FAM161AQ3B820 660 aa22.3■■□□□ 1.16
RPUSD3-214ENST00000473522 RABL6Q3YEC7 729 aaPredicted RBP22.3■■□□□ 1.16
RPUSD3-214ENST00000473522 DPY19L2Q6NUT2 758 aa22.3■■□□□ 1.16
RPUSD3-214ENST00000473522 ANKRD18BA2A2Z9 1011 aa22.29■■□□□ 1.16
RPUSD3-214ENST00000473522 JDP2Q8WYK2 163 aa22.29■■□□□ 1.16
RPUSD3-214ENST00000473522 FRAT1Q92837 279 aaPredicted RBP22.29■■□□□ 1.16
RPUSD3-214ENST00000473522 POLLQ9UGP5 575 aa22.29■■□□□ 1.16
RPUSD3-214ENST00000473522 MINPP1Q9UNW1 487 aa22.29■■□□□ 1.16
RPUSD3-214ENST00000473522 KDM2BQ8NHM5 1336 aa22.29■■□□□ 1.16
RPUSD3-214ENST00000473522 IGHMBP2P38935 993 aaKnown RBP22.28■■□□□ 1.16
RPUSD3-214ENST00000473522 KIAA2012Q0VF49 1180 aa22.28■■□□□ 1.16
RPUSD3-214ENST00000473522 IFIT5Q13325 482 aaKnown RBP22.28■■□□□ 1.16
RPUSD3-214ENST00000473522 ZKSCAN2Q63HK3 967 aa22.28■■□□□ 1.16
RPUSD3-214ENST00000473522 LARGE2Q8N3Y3 721 aa22.28■■□□□ 1.16
RPUSD3-214ENST00000473522 TBC1D16Q8TBP0 767 aa22.28■■□□□ 1.16
RPUSD3-214ENST00000473522 ZNF526Q8TF50 670 aaPredicted RBP22.28■■□□□ 1.16
RPUSD3-214ENST00000473522 FER1L6Q2WGJ9 1857 aa22.28■■□□□ 1.16
RPUSD3-214ENST00000473522 PPIP5K2O43314 1243 aa22.26■■□□□ 1.15
RPUSD3-214ENST00000473522 CCDC57Q2TAC2 916 aa22.26■■□□□ 1.15
RPUSD3-214ENST00000473522 ANKRD44Q8N8A2 993 aa22.26■■□□□ 1.15
RPUSD3-214ENST00000473522 BICC1Q9H694 974 aaKnown RBP22.26■■□□□ 1.15
RPUSD3-214ENST00000473522 COL4A1P02462 1669 aa22.26■■□□□ 1.15
RPUSD3-214ENST00000473522 KIF3CO14782 793 aa22.25■■□□□ 1.15
RPUSD3-214ENST00000473522 AOC3Q16853 763 aa22.25■■□□□ 1.15
RPUSD3-214ENST00000473522 WASHC4Q2M389 1173 aa22.25■■□□□ 1.15
RPUSD3-214ENST00000473522 MPHOSPH8Q99549 860 aa22.25■■□□□ 1.15
RPUSD3-214ENST00000473522 ANKIB1Q9P2G1 1089 aa22.25■■□□□ 1.15
RPUSD3-214ENST00000473522 HDAC5Q9UQL6 1122 aa22.25■■□□□ 1.15
RPUSD3-214ENST00000473522 TNNQ9UQP3 1299 aa22.25■■□□□ 1.15
RPUSD3-214ENST00000473522 LAMB2P55268 1798 aa22.25■■□□□ 1.15
RPUSD3-214ENST00000473522 C6orf229H3BNL8 230 aa22.24■■□□□ 1.15
RPUSD3-214ENST00000473522 EYA3Q99504 573 aa22.24■■□□□ 1.15
RPUSD3-214ENST00000473522 NMRK2Q9NPI5 230 aa22.24■■□□□ 1.15
RPUSD3-214ENST00000473522 GGA1Q9UJY5 639 aa22.24■■□□□ 1.15
RPUSD3-214ENST00000473522 XDHP47989 1333 aa22.24■■□□□ 1.15
RPUSD3-214ENST00000473522 POTECB2RU33 542 aa22.23■■□□□ 1.15
RPUSD3-214ENST00000473522 DDNO94850 711 aaPredicted RBP22.23■■□□□ 1.15
RPUSD3-214ENST00000473522 ATP2B4P23634 1241 aa22.23■■□□□ 1.15
RPUSD3-214ENST00000473522 ANKRD2Q9GZV1 360 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms