RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 CCDC152Q4G0S7 254 aa23.9■■□□□ 1.42
CTDSP1-207ENST00000473420 RTL9Q8NET4 1388 aa23.9■■□□□ 1.42
CTDSP1-207ENST00000473420 TAF1P21675 1872 aa23.9■■□□□ 1.42
CTDSP1-207ENST00000473420 PLIN1O60240 522 aa23.89■■□□□ 1.41
CTDSP1-207ENST00000473420 PDE3AQ14432 1141 aa23.89■■□□□ 1.41
CTDSP1-207ENST00000473420 DDX46Q7L014 1031 aaKnown RBP23.89■■□□□ 1.41
CTDSP1-207ENST00000473420 TTLL11Q8NHH1 800 aa23.89■■□□□ 1.41
CTDSP1-207ENST00000473420 HDAC5Q9UQL6 1122 aa23.89■■□□□ 1.41
CTDSP1-207ENST00000473420 CSF1RP07333 972 aa23.88■■□□□ 1.41
CTDSP1-207ENST00000473420 GNAI3P08754 354 aa23.88■■□□□ 1.41
CTDSP1-207ENST00000473420 UBTFL1P0CB47 393 aaPredicted RBP23.87■■□□□ 1.41
CTDSP1-207ENST00000473420 RRP1P56182 461 aaKnown RBP23.87■■□□□ 1.41
CTDSP1-207ENST00000473420 FOXO4P98177 505 aa23.87■■□□□ 1.41
CTDSP1-207ENST00000473420 PRPF40BQ6NWY9 871 aaKnown RBP23.87■■□□□ 1.41
CTDSP1-207ENST00000473420 SUCLG2Q96I99 432 aa23.87■■□□□ 1.41
CTDSP1-207ENST00000473420 BCS1LQ9Y276 419 aa23.87■■□□□ 1.41
CTDSP1-207ENST00000473420 GRAPQ13588 217 aa23.86■■□□□ 1.41
CTDSP1-207ENST00000473420 ITPRIPQ8IWB1 547 aa23.86■■□□□ 1.41
CTDSP1-207ENST00000473420 GRAPLQ8TC17 118 aaPredicted RBP23.86■■□□□ 1.41
CTDSP1-207ENST00000473420 PANK1Q8TE04 598 aa23.86■■□□□ 1.41
CTDSP1-207ENST00000473420 KAZALD1Q96I82 304 aa23.86■■□□□ 1.41
CTDSP1-207ENST00000473420 MEIS3Q99687 375 aa23.86■■□□□ 1.41
CTDSP1-207ENST00000473420 LRRC37AA6NMS7 1700 aa23.86■■□□□ 1.41
CTDSP1-207ENST00000473420 DCAF8L1A6NGE4 600 aa23.85■■□□□ 1.41
CTDSP1-207ENST00000473420 GPR162Q16538 588 aa23.85■■□□□ 1.41
CTDSP1-207ENST00000473420 YBX3P16989 372 aaKnown RBP eCLIP23.84■■□□□ 1.411e-6■□□□□ 10.2
CTDSP1-207ENST00000473420 MVPQ14764 893 aaKnown RBP23.84■■□□□ 1.41
CTDSP1-207ENST00000473420 RABL6Q3YEC7 729 aaPredicted RBP23.84■■□□□ 1.41
CTDSP1-207ENST00000473420 EPHA10Q5JZY3 1008 aa23.84■■□□□ 1.41
CTDSP1-207ENST00000473420 TMC4Q7Z404 712 aa23.84■■□□□ 1.41
CTDSP1-207ENST00000473420 PELP1Q8IZL8 1130 aaKnown RBP23.84■■□□□ 1.41
CTDSP1-207ENST00000473420 WWC3Q9ULE0 1092 aa23.84■■□□□ 1.41
CTDSP1-207ENST00000473420 SPEF2Q9C093 1822 aa23.84■■□□□ 1.41
CTDSP1-207ENST00000473420 COL4A1P02462 1669 aa23.83■■□□□ 1.41
CTDSP1-207ENST00000473420 BBOX1O75936 387 aa23.83■■□□□ 1.41
CTDSP1-207ENST00000473420 GREM2Q9H772 168 aa23.83■■□□□ 1.41
CTDSP1-207ENST00000473420 FER1L6Q2WGJ9 1857 aa23.83■■□□□ 1.4
CTDSP1-207ENST00000473420 PPEF1O14829 653 aaPredicted RBP23.82■■□□□ 1.4
CTDSP1-207ENST00000473420 GRIN3BO60391 1043 aa23.82■■□□□ 1.4
CTDSP1-207ENST00000473420 SOGA3Q5TF21 947 aa23.82■■□□□ 1.4
CTDSP1-207ENST00000473420 LMBR1LQ6UX01 489 aa23.82■■□□□ 1.4
CTDSP1-207ENST00000473420 C7orf43Q8WVR3 580 aa23.82■■□□□ 1.4
CTDSP1-207ENST00000473420 CDC5LQ99459 802 aaKnown RBP23.82■■□□□ 1.4
CTDSP1-207ENST00000473420 BICC1Q9H694 974 aaKnown RBP23.82■■□□□ 1.4
CTDSP1-207ENST00000473420 DDX19BQ9UMR2 479 aa23.82■■□□□ 1.4
CTDSP1-207ENST00000473420 ZBTB7BO15156 539 aaPredicted RBP23.81■■□□□ 1.4
CTDSP1-207ENST00000473420 ANKRD44Q8N8A2 993 aa23.81■■□□□ 1.4
CTDSP1-207ENST00000473420 CCDC85AQ96PX6 553 aaPredicted RBP23.81■■□□□ 1.4
CTDSP1-207ENST00000473420 SEC31BQ9NQW1 1179 aa23.81■■□□□ 1.4
CTDSP1-207ENST00000473420 ITGA6P23229 1130 aa23.8■■□□□ 1.4
CTDSP1-207ENST00000473420 FAM161AQ3B820 660 aa23.8■■□□□ 1.4
CTDSP1-207ENST00000473420 C20orf194Q5TEA3 1177 aa23.8■■□□□ 1.4
CTDSP1-207ENST00000473420 CELF1Q92879 486 aaKnown RBP23.8■■□□□ 1.4
CTDSP1-207ENST00000473420 CHMP4BQ9H444 224 aaKnown RBP23.8■■□□□ 1.4
CTDSP1-207ENST00000473420 COG6Q9Y2V7 657 aa23.8■■□□□ 1.4
CTDSP1-207ENST00000473420 LRRFIP2Q9Y608 721 aaKnown RBP23.8■■□□□ 1.4
CTDSP1-207ENST00000473420 ANKRD18BA2A2Z9 1011 aa23.79■■□□□ 1.4
CTDSP1-207ENST00000473420 C21orf2O43822 256 aa23.79■■□□□ 1.4
CTDSP1-207ENST00000473420 RPS8P62241 208 aaKnown RBP23.79■■□□□ 1.4
CTDSP1-207ENST00000473420 CC2D2BQ6DHV5 1058 aa23.79■■□□□ 1.4
CTDSP1-207ENST00000473420 ANKRD18AQ8IVF6 992 aa23.79■■□□□ 1.4
CTDSP1-207ENST00000473420 GNAI2P04899 355 aa23.78■■□□□ 1.4
CTDSP1-207ENST00000473420 IFIT5Q13325 482 aaKnown RBP23.78■■□□□ 1.4
CTDSP1-207ENST00000473420 GRIPAP1Q4V328 841 aa23.78■■□□□ 1.4
CTDSP1-207ENST00000473420 CHMP3Q9Y3E7 222 aa23.78■■□□□ 1.4
CTDSP1-207ENST00000473420 ATP6V0A2Q9Y487 856 aa23.78■■□□□ 1.4
CTDSP1-207ENST00000473420 SNED1Q8TER0 1413 aa23.77■■□□□ 1.4
CTDSP1-207ENST00000473420 CCDC57Q2TAC2 916 aa23.77■■□□□ 1.4
CTDSP1-207ENST00000473420 CCDC93Q567U6 631 aa23.77■■□□□ 1.4
CTDSP1-207ENST00000473420 SP8Q8IXZ3 490 aa23.77■■□□□ 1.4
CTDSP1-207ENST00000473420 TMX4Q9H1E5 349 aaPredicted RBP23.76■■□□□ 1.39
CTDSP1-207ENST00000473420 IGHMBP2P38935 993 aaKnown RBP23.75■■□□□ 1.39
CTDSP1-207ENST00000473420 MTX1Q13505 466 aa23.75■■□□□ 1.39
CTDSP1-207ENST00000473420 BSDC1Q9NW68 430 aaPredicted RBP23.75■■□□□ 1.39
CTDSP1-207ENST00000473420 ZNF219Q9P2Y4 722 aaPredicted RBP23.75■■□□□ 1.39
CTDSP1-207ENST00000473420 LTBP1Q14766 1721 aa23.75■■□□□ 1.39
CTDSP1-207ENST00000473420 A0A1B0GUL6 1792 aa23.75■■□□□ 1.39
CTDSP1-207ENST00000473420 CHD4Q14839 1912 aa23.74■■□□□ 1.39
CTDSP1-207ENST00000473420 RTKN2Q8IZC4 609 aa23.74■■□□□ 1.39
CTDSP1-207ENST00000473420 SUPT16HQ9Y5B9 1047 aaKnown RBP23.74■■□□□ 1.39
CTDSP1-207ENST00000473420 SBF1O95248 1867 aa23.74■■□□□ 1.39
CTDSP1-207ENST00000473420 GOLGB1Q14789 3259 aaKnown RBP23.73■■□□□ 1.39
CTDSP1-207ENST00000473420 LTBP3Q9NS15 1303 aa23.73■■□□□ 1.39
CTDSP1-207ENST00000473420 ARHGAP27Q6ZUM4 889 aa23.72■■□□□ 1.39
CTDSP1-207ENST00000473420 MPHOSPH8Q99549 860 aa23.72■■□□□ 1.39
CTDSP1-207ENST00000473420 ZBTB40Q9NUA8 1239 aa23.72■■□□□ 1.39
CTDSP1-207ENST00000473420 CCDC88AQ3V6T2 1871 aa23.72■■□□□ 1.39
CTDSP1-207ENST00000473420 TAF7LQ5H9L4 462 aa23.71■■□□□ 1.39
CTDSP1-207ENST00000473420 OLFM4Q6UX06 510 aa23.71■■□□□ 1.39
CTDSP1-207ENST00000473420 DICER1Q9UPY3 1922 aaKnown RBP23.71■■□□□ 1.39
CTDSP1-207ENST00000473420 NFKBIEO00221 500 aa23.7■■□□□ 1.38
CTDSP1-207ENST00000473420 RFX5P48382 616 aaPredicted RBP23.7■■□□□ 1.38
CTDSP1-207ENST00000473420 PSMD1Q99460 953 aa23.7■■□□□ 1.38
CTDSP1-207ENST00000473420 DUOX1Q9NRD9 1551 aa23.69■■□□□ 1.38
CTDSP1-207ENST00000473420 FKBP4Q02790 459 aaKnown RBP eCLIP23.69■■□□□ 1.382e-6■■■■■ 27
CTDSP1-207ENST00000473420 TAOK3Q9H2K8 898 aa23.69■■□□□ 1.38
CTDSP1-207ENST00000473420 LDHAL6AQ6ZMR3 332 aa23.68■■□□□ 1.38
CTDSP1-207ENST00000473420 SLC51AQ86UW1 340 aa23.68■■□□□ 1.38
CTDSP1-207ENST00000473420 MPNDQ8N594 471 aa23.68■■□□□ 1.38
CTDSP1-207ENST00000473420 ZNF594Q96JF6 807 aaPredicted RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms