RNA–Protein interactions for RNA: ENST00000473349.1

BRD3-205, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-205ENST00000473349 DDX21Q9NR30 783 aaKnown RBP eCLIP12.38□□□□□ -0.43
BRD3-205ENST00000473349 PPIP5K2O43314 1243 aa12.37□□□□□ -0.43
BRD3-205ENST00000473349 SCNN1DP51172 638 aa12.37□□□□□ -0.43
BRD3-205ENST00000473349 TCIRG1Q13488 830 aa12.37□□□□□ -0.43
BRD3-205ENST00000473349 RTL5Q5HYW3 569 aaPredicted RBP12.37□□□□□ -0.43
BRD3-205ENST00000473349 HDGFL1Q5TGJ6 251 aa12.37□□□□□ -0.43
BRD3-205ENST00000473349 BABAM1Q9NWV8 329 aa12.37□□□□□ -0.43
BRD3-205ENST00000473349 TRMT112Q9UI30 125 aaKnown RBP12.37□□□□□ -0.43
BRD3-205ENST00000473349 ATP6V0A2Q9Y487 856 aa12.37□□□□□ -0.43
BRD3-205ENST00000473349 ANKRD36CQ5JPF3 1778 aa12.37□□□□□ -0.43
BRD3-205ENST00000473349 CNTNAP1P78357 1384 aa12.36□□□□□ -0.43
BRD3-205ENST00000473349 SPDYE4A6NLX3 237 aa12.36□□□□□ -0.43
BRD3-205ENST00000473349 VEGFBP49765 207 aa12.36□□□□□ -0.43
BRD3-205ENST00000473349 EIF6P56537 245 aaKnown RBP12.36□□□□□ -0.43
BRD3-205ENST00000473349 GRIPAP1Q4V328 841 aa12.36□□□□□ -0.43
BRD3-205ENST00000473349 CC2D2BQ6DHV5 1058 aa12.36□□□□□ -0.43
BRD3-205ENST00000473349 TNS4Q8IZW8 715 aa12.36□□□□□ -0.43
BRD3-205ENST00000473349 CNTROBQ8N137 903 aa12.36□□□□□ -0.43
BRD3-205ENST00000473349 MBIPQ9NS73 344 aa12.36□□□□□ -0.43
BRD3-205ENST00000473349 SHTN1A0MZ66 631 aa12.35□□□□□ -0.43
BRD3-205ENST00000473349 TMEM88BA6NKF7 163 aa12.35□□□□□ -0.43
BRD3-205ENST00000473349 TRAF5O00463 557 aa12.35□□□□□ -0.43
BRD3-205ENST00000473349 ELL2O00472 640 aaPredicted RBP12.35□□□□□ -0.43
BRD3-205ENST00000473349 APAF1O14727 1248 aa12.35□□□□□ -0.43
BRD3-205ENST00000473349 DUSP27Q5VZP5 1158 aa12.35□□□□□ -0.43
BRD3-205ENST00000473349 NIM1KQ8IY84 436 aa12.35□□□□□ -0.43
BRD3-205ENST00000473349 FAM89AQ96GI7 184 aa12.35□□□□□ -0.43
BRD3-205ENST00000473349 PRKRIP1Q9H875 184 aaPredicted RBP12.35□□□□□ -0.43
BRD3-205ENST00000473349 SH3TC1Q8TE82 1336 aa12.35□□□□□ -0.43
BRD3-205ENST00000473349 FOXN1O15353 648 aa12.34□□□□□ -0.43
BRD3-205ENST00000473349 CXCL9Q07325 125 aa12.34□□□□□ -0.43
BRD3-205ENST00000473349 CCDC184Q52MB2 194 aa12.34□□□□□ -0.43
BRD3-205ENST00000473349 JARID2Q92833 1246 aaPredicted RBP12.34□□□□□ -0.43
BRD3-205ENST00000473349 DDX60Q8IY21 1712 aaKnown RBP12.34□□□□□ -0.43
BRD3-205ENST00000473349 RAD17O75943 681 aa12.33□□□□□ -0.44
BRD3-205ENST00000473349 LMOD1P29536 600 aaPredicted RBP12.33□□□□□ -0.44
BRD3-205ENST00000473349 HSP90AB3PQ58FF7 597 aa12.33□□□□□ -0.44
BRD3-205ENST00000473349 DPP8Q6V1X1 898 aaPredicted RBP12.33□□□□□ -0.44
BRD3-205ENST00000473349 ANKRD13DQ6ZTN6 518 aa12.33□□□□□ -0.44
BRD3-205ENST00000473349 DDX46Q7L014 1031 aaKnown RBP12.33□□□□□ -0.44
BRD3-205ENST00000473349 PNMA8AQ86V59 439 aaPredicted RBP12.33□□□□□ -0.44
BRD3-205ENST00000473349 MPNDQ8N594 471 aa12.33□□□□□ -0.44
BRD3-205ENST00000473349 PLBD2Q8NHP8 589 aa12.33□□□□□ -0.44
BRD3-205ENST00000473349 CELF1Q92879 486 aaKnown RBP12.33□□□□□ -0.44
BRD3-205ENST00000473349 GPR101Q96P66 508 aaPredicted RBP12.33□□□□□ -0.44
BRD3-205ENST00000473349 ISCA1Q9BUE6 129 aa12.33□□□□□ -0.44
BRD3-205ENST00000473349 PHAXQ9H814 394 aaKnown RBP12.33□□□□□ -0.44
BRD3-205ENST00000473349 DUOX1Q9NRD9 1551 aa12.33□□□□□ -0.44
BRD3-205ENST00000473349 YDJCA8MPS7 323 aa12.32□□□□□ -0.44
BRD3-205ENST00000473349 ZNF853P0CG23 659 aa12.32□□□□□ -0.44
BRD3-205ENST00000473349 PRKAR2AP13861 404 aaKnown RBP12.32□□□□□ -0.44
BRD3-205ENST00000473349 GMPSP49915 693 aaPredicted RBP12.32□□□□□ -0.44
BRD3-205ENST00000473349 GRAPQ13588 217 aa12.32□□□□□ -0.44
BRD3-205ENST00000473349 SP8Q8IXZ3 490 aa12.32□□□□□ -0.44
BRD3-205ENST00000473349 GRAPLQ8TC17 118 aaPredicted RBP12.32□□□□□ -0.44
BRD3-205ENST00000473349 CFAP44Q96MT7 982 aa12.32□□□□□ -0.44
BRD3-205ENST00000473349 ZNRF3Q9ULT6 936 aa12.32□□□□□ -0.44
BRD3-205ENST00000473349 BBOX1O75936 387 aa12.31□□□□□ -0.44
BRD3-205ENST00000473349 GRM1Q13255 1194 aa12.31□□□□□ -0.44
BRD3-205ENST00000473349 DLK2Q6UY11 383 aa12.31□□□□□ -0.44
BRD3-205ENST00000473349 C8orf58Q8NAV2 365 aa12.31□□□□□ -0.44
BRD3-205ENST00000473349 RTFDC1Q9BY42 306 aaPredicted RBP12.31□□□□□ -0.44
BRD3-205ENST00000473349 TMX4Q9H1E5 349 aaPredicted RBP12.31□□□□□ -0.44
BRD3-205ENST00000473349 GPRC5DQ9NZD1 345 aa12.31□□□□□ -0.44
BRD3-205ENST00000473349 DBF4Q9UBU7 674 aaPredicted RBP12.31□□□□□ -0.44
BRD3-205ENST00000473349 ABT1Q9ULW3 272 aaKnown RBP12.31□□□□□ -0.44
BRD3-205ENST00000473349 RIMBP2O15034 1052 aa12.3□□□□□ -0.44
BRD3-205ENST00000473349 PRR29P0C7W0 189 aa12.3□□□□□ -0.44
BRD3-205ENST00000473349 KIAA2012Q0VF49 1180 aa12.3□□□□□ -0.44
BRD3-205ENST00000473349 CST9Q5W186 159 aa12.3□□□□□ -0.44
BRD3-205ENST00000473349 TRPM4Q8TD43 1214 aa12.3□□□□□ -0.44
BRD3-205ENST00000473349 CCDC85AQ96PX6 553 aaPredicted RBP12.3□□□□□ -0.44
BRD3-205ENST00000473349 SEC31BQ9NQW1 1179 aa12.3□□□□□ -0.44
BRD3-205ENST00000473349 KCNQ5Q9NR82 932 aa12.3□□□□□ -0.44
BRD3-205ENST00000473349 RASSF10A6NK89 507 aa12.29□□□□□ -0.44
BRD3-205ENST00000473349 IRS4O14654 1257 aaPredicted RBP12.29□□□□□ -0.44
BRD3-205ENST00000473349 HOXB7P09629 217 aa12.29□□□□□ -0.44
BRD3-205ENST00000473349 HIRAP54198 1017 aaPredicted RBP12.29□□□□□ -0.44
BRD3-205ENST00000473349 GPSM2P81274 684 aa12.29□□□□□ -0.44
BRD3-205ENST00000473349 DEFB115Q30KQ5 88 aa12.29□□□□□ -0.44
BRD3-205ENST00000473349 CIAPIN1Q6FI81 312 aa12.29□□□□□ -0.44
BRD3-205ENST00000473349 TSPYL6Q8N831 410 aa12.29□□□□□ -0.44
BRD3-205ENST00000473349 GLIS2Q9BZE0 524 aaPredicted RBP12.29□□□□□ -0.44
BRD3-205ENST00000473349 DBNDD1Q9H9R9 158 aa12.29□□□□□ -0.44
BRD3-205ENST00000473349 HYPKQ9NX55 129 aa12.29□□□□□ -0.44
BRD3-205ENST00000473349 POLLQ9UGP5 575 aa12.29□□□□□ -0.44
BRD3-205ENST00000473349 LRRC37AA6NMS7 1700 aa12.28□□□□□ -0.44
BRD3-205ENST00000473349 EGFRP00533 1210 aa12.28□□□□□ -0.44
BRD3-205ENST00000473349 DOK7Q18PE1 504 aa12.28□□□□□ -0.44
BRD3-205ENST00000473349 CYP4F22Q6NT55 531 aa12.28□□□□□ -0.44
BRD3-205ENST00000473349 PAXIP1Q6ZW49 1069 aaPredicted RBP12.28□□□□□ -0.44
BRD3-205ENST00000473349 USP50Q70EL3 339 aaPredicted RBP12.28□□□□□ -0.44
BRD3-205ENST00000473349 RIC3Q7Z5B4 369 aa12.28□□□□□ -0.44
BRD3-205ENST00000473349 SUPT20HQ8NEM7 779 aa12.28□□□□□ -0.44
BRD3-205ENST00000473349 TSR2Q969E8 191 aaKnown RBP12.28□□□□□ -0.44
BRD3-205ENST00000473349 MYD88Q99836 296 aa12.28□□□□□ -0.44
BRD3-205ENST00000473349 BCL2L13Q9BXK5 485 aa12.28□□□□□ -0.44
BRD3-205ENST00000473349 NSFL1CQ9UNZ2 370 aaKnown RBP12.28□□□□□ -0.44
BRD3-205ENST00000473349 WDR33Q9C0J8 1336 aaKnown RBP12.28□□□□□ -0.44
BRD3-205ENST00000473349 LBX1P52954 281 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms