RNA–Protein interactions for RNA: ENST00000472961.1

CFHR1-204, Transcript of complement factor H related 1, humanhuman

TSL 1 (best)

Gene CFHR1, Length 399 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR1-204ENST00000472961 NIM1KQ8IY84 436 aa8.38□□□□□ -1.07
CFHR1-204ENST00000472961 RSPH6AQ9H0K4 717 aa8.38□□□□□ -1.07
CFHR1-204ENST00000472961 R3HDMLQ9H3Y0 253 aa8.38□□□□□ -1.07
CFHR1-204ENST00000472961 SAGE1Q9NXZ1 904 aa8.38□□□□□ -1.07
CFHR1-204ENST00000472961 RTL9Q8NET4 1388 aa8.37□□□□□ -1.07
CFHR1-204ENST00000472961 RGL2O15211 777 aa8.37□□□□□ -1.07
CFHR1-204ENST00000472961 SLC10A3P09131 477 aa8.37□□□□□ -1.07
CFHR1-204ENST00000472961 FXR1P51114 621 aaKnown RBP eCLIP8.37□□□□□ -1.07
CFHR1-204ENST00000472961 HABP4Q5JVS0 413 aaKnown RBP8.37□□□□□ -1.07
CFHR1-204ENST00000472961 RGMBQ6NW40 437 aa8.37□□□□□ -1.07
CFHR1-204ENST00000472961 MCM10Q7L590 875 aa8.37□□□□□ -1.07
CFHR1-204ENST00000472961 ZNF34Q8IZ26 560 aa8.37□□□□□ -1.07
CFHR1-204ENST00000472961 CRAMP1Q96RY5 1269 aa8.37□□□□□ -1.07
CFHR1-204ENST00000472961 PCGF6Q9BYE7 350 aa8.37□□□□□ -1.07
CFHR1-204ENST00000472961 MIS18AQ9NYP9 233 aa8.37□□□□□ -1.07
CFHR1-204ENST00000472961 ZNRF3Q9ULT6 936 aa8.37□□□□□ -1.07
CFHR1-204ENST00000472961 ATP6V0A2Q9Y487 856 aa8.37□□□□□ -1.07
CFHR1-204ENST00000472961 A0A1B0GUL6 1792 aa8.37□□□□□ -1.07
CFHR1-204ENST00000472961 TRIOBPQ9H2D6 2365 aa8.36□□□□□ -1.07
CFHR1-204ENST00000472961 SNRPA1P09661 255 aaKnown RBP8.36□□□□□ -1.07
CFHR1-204ENST00000472961 CAP1Q01518 475 aa8.36□□□□□ -1.07
CFHR1-204ENST00000472961 CC2D2BQ6DHV5 1058 aa8.36□□□□□ -1.07
CFHR1-204ENST00000472961 CDC37L1Q7L3B6 337 aa8.36□□□□□ -1.07
CFHR1-204ENST00000472961 CTU1Q7Z7A3 348 aaKnown RBP8.36□□□□□ -1.07
CFHR1-204ENST00000472961 RASAL3Q86YV0 1011 aa8.36□□□□□ -1.07
CFHR1-204ENST00000472961 MICALL2Q8IY33 904 aa8.36□□□□□ -1.07
CFHR1-204ENST00000472961 ZC3H15Q8WU90 426 aaKnown RBP8.36□□□□□ -1.07
CFHR1-204ENST00000472961 GBA2Q9HCG7 927 aaPredicted RBP8.36□□□□□ -1.07
CFHR1-204ENST00000472961 CNOT7Q9UIV1 285 aaKnown RBP8.36□□□□□ -1.07
CFHR1-204ENST00000472961 ZNF652Q9Y2D9 606 aa8.36□□□□□ -1.07
CFHR1-204ENST00000472961 SPTBN5Q9NRC6 3674 aaKnown RBP8.35□□□□□ -1.07
CFHR1-204ENST00000472961 VCANP13611 3396 aa8.35□□□□□ -1.07
CFHR1-204ENST00000472961 MAP3K15Q6ZN16 1313 aa8.35□□□□□ -1.07
CFHR1-204ENST00000472961 CDHR2Q9BYE9 1310 aa8.35□□□□□ -1.07
CFHR1-204ENST00000472961 POTEFA5A3E0 1075 aa8.35□□□□□ -1.07
CFHR1-204ENST00000472961 KIAA2012Q0VF49 1180 aa8.35□□□□□ -1.07
CFHR1-204ENST00000472961 TBC1D10BQ4KMP7 808 aaPredicted RBP8.35□□□□□ -1.07
CFHR1-204ENST00000472961 MOB2Q70IA6 237 aa8.35□□□□□ -1.07
CFHR1-204ENST00000472961 NGEFQ8N5V2 710 aa8.35□□□□□ -1.07
CFHR1-204ENST00000472961 RPGRQ92834 1020 aaKnown RBP8.35□□□□□ -1.07
CFHR1-204ENST00000472961 SCAF8Q9UPN6 1271 aaKnown RBP8.35□□□□□ -1.07
CFHR1-204ENST00000472961 ALPK3Q96L96 1907 aa8.35□□□□□ -1.07
CFHR1-204ENST00000472961 PSMD14O00487 310 aa8.34□□□□□ -1.07
CFHR1-204ENST00000472961 PRKAR2BP31323 418 aa8.34□□□□□ -1.07
CFHR1-204ENST00000472961 CC2D1BQ5T0F9 858 aaKnown RBP8.34□□□□□ -1.07
CFHR1-204ENST00000472961 GAS2L2Q8NHY3 880 aa8.34□□□□□ -1.07
CFHR1-204ENST00000472961 ZNF296Q8WUU4 475 aaPredicted RBP8.34□□□□□ -1.07
CFHR1-204ENST00000472961 ZNF428Q96B54 188 aa8.34□□□□□ -1.07
CFHR1-204ENST00000472961 ZBTB3Q9H5J0 574 aa8.34□□□□□ -1.07
CFHR1-204ENST00000472961 MYH3P11055 1940 aa8.34□□□□□ -1.07
CFHR1-204ENST00000472961 ERVV-1B6SEH8 477 aa8.33□□□□□ -1.08
CFHR1-204ENST00000472961 U2SURPO15042 1029 aaKnown RBP8.33□□□□□ -1.08
CFHR1-204ENST00000472961 TBC1D8O95759 1140 aa8.33□□□□□ -1.08
CFHR1-204ENST00000472961 ZNF157P51786 506 aaPredicted RBP8.33□□□□□ -1.08
CFHR1-204ENST00000472961 KRT26Q7Z3Y9 468 aa8.33□□□□□ -1.08
CFHR1-204ENST00000472961 PRUNE2Q8WUY3 3088 aa8.33□□□□□ -1.08
CFHR1-204ENST00000472961 RBM17Q96I25 401 aaKnown RBP8.33□□□□□ -1.08
CFHR1-204ENST00000472961 KNSTRNQ9Y448 316 aa8.33□□□□□ -1.08
CFHR1-204ENST00000472961 PDIA6Q15084 440 aa8.32□□□□□ -1.08
CFHR1-204ENST00000472961 PROSER3Q2NL68 480 aa8.32□□□□□ -1.08
CFHR1-204ENST00000472961 SLC10A5Q5PT55 438 aa8.32□□□□□ -1.08
CFHR1-204ENST00000472961 CDCA5Q96FF9 252 aa8.32□□□□□ -1.08
CFHR1-204ENST00000472961 THUMPD2Q9BTF0 503 aaKnown RBP8.32□□□□□ -1.08
CFHR1-204ENST00000472961 NYXQ9GZU5 481 aa8.32□□□□□ -1.08
CFHR1-204ENST00000472961 DBNDD1Q9H9R9 158 aa8.32□□□□□ -1.08
CFHR1-204ENST00000472961 ANXA1P04083 346 aa8.31□□□□□ -1.08
CFHR1-204ENST00000472961 HCLS1P14317 486 aaPredicted RBP8.31□□□□□ -1.08
CFHR1-204ENST00000472961 MYL6BP14649 208 aa8.31□□□□□ -1.08
CFHR1-204ENST00000472961 GTF2E1P29083 439 aaPredicted RBP8.31□□□□□ -1.08
CFHR1-204ENST00000472961 SP8Q8IXZ3 490 aa8.31□□□□□ -1.08
CFHR1-204ENST00000472961 CCDC102AQ96A19 550 aa8.31□□□□□ -1.08
CFHR1-204ENST00000472961 BCL2L13Q9BXK5 485 aa8.31□□□□□ -1.08
CFHR1-204ENST00000472961 VPS33BQ9H267 617 aa8.31□□□□□ -1.08
CFHR1-204ENST00000472961 GGA3Q9NZ52 723 aa8.31□□□□□ -1.08
CFHR1-204ENST00000472961 POLLQ9UGP5 575 aa8.31□□□□□ -1.08
CFHR1-204ENST00000472961 ZNF609O15014 1411 aa8.3□□□□□ -1.08
CFHR1-204ENST00000472961 EIF4A1P60842 406 aaKnown RBP8.3□□□□□ -1.08
CFHR1-204ENST00000472961 EIF4G2P78344 907 aaKnown RBP eCLIP8.3□□□□□ -1.08
CFHR1-204ENST00000472961 GRIPAP1Q4V328 841 aa8.3□□□□□ -1.08
CFHR1-204ENST00000472961 RBM26Q5T8P6 1007 aaKnown RBP8.3□□□□□ -1.08
CFHR1-204ENST00000472961 PRAMEF18Q5VWM3 479 aa8.3□□□□□ -1.08
CFHR1-204ENST00000472961 DPP8Q6V1X1 898 aaPredicted RBP8.3□□□□□ -1.08
CFHR1-204ENST00000472961 GIGYF2Q6Y7W6 1299 aaKnown RBP8.3□□□□□ -1.08
CFHR1-204ENST00000472961 NPM2Q86SE8 214 aaKnown RBP8.3□□□□□ -1.08
CFHR1-204ENST00000472961 MPNDQ8N594 471 aa8.3□□□□□ -1.08
CFHR1-204ENST00000472961 C2orf69Q8N8R5 385 aa8.3□□□□□ -1.08
CFHR1-204ENST00000472961 DPF2Q92785 391 aa8.3□□□□□ -1.08
CFHR1-204ENST00000472961 CELF1Q92879 486 aaKnown RBP8.3□□□□□ -1.08
CFHR1-204ENST00000472961 RRP7AQ9Y3A4 280 aaKnown RBP8.3□□□□□ -1.08
CFHR1-204ENST00000472961 SSC5DA1L4H1 1573 aa8.3□□□□□ -1.08
CFHR1-204ENST00000472961 WTIPA6NIX2 430 aaPredicted RBP8.29□□□□□ -1.08
CFHR1-204ENST00000472961 GPR25O00155 361 aa8.29□□□□□ -1.08
CFHR1-204ENST00000472961 DOK7Q18PE1 504 aa8.29□□□□□ -1.08
CFHR1-204ENST00000472961 FBXO46Q6PJ61 603 aaPredicted RBP8.29□□□□□ -1.08
CFHR1-204ENST00000472961 COLQQ9Y215 455 aaPredicted RBP8.29□□□□□ -1.08
CFHR1-204ENST00000472961 CUL9Q8IWT3 2517 aa8.29□□□□□ -1.08
CFHR1-204ENST00000472961 DNAH12Q6ZR08 3092 aa8.28□□□□□ -1.08
CFHR1-204ENST00000472961 UBE2Q2LH0YL09 131 aa8.28□□□□□ -1.08
CFHR1-204ENST00000472961 H7C1D1 291 aa8.28□□□□□ -1.08
CFHR1-204ENST00000472961 RIMBP2O15034 1052 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms