RNA–Protein interactions for RNA: ENST00000472746.2

CCDC180-203, Transcript of coiled-coil domain containing 180, humanhuman

TSL 4

Gene CCDC180, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-203ENST00000472746 ABCC4O15439 1325 aa17.59■□□□□ 0.41
CCDC180-203ENST00000472746 CASP7P55210 303 aa17.59■□□□□ 0.41
CCDC180-203ENST00000472746 INTS3Q68E01 1043 aaKnown RBP17.59■□□□□ 0.41
CCDC180-203ENST00000472746 CC2D2BQ6DHV5 1058 aa17.59■□□□□ 0.41
CCDC180-203ENST00000472746 TMC4Q7Z404 712 aa17.59■□□□□ 0.41
CCDC180-203ENST00000472746 DZIP1LQ8IYY4 767 aaKnown RBP17.59■□□□□ 0.41
CCDC180-203ENST00000472746 CCDC85AQ96PX6 553 aaPredicted RBP17.59■□□□□ 0.41
CCDC180-203ENST00000472746 TNRC6CQ9HCJ0 1690 aaKnown RBP17.58■□□□□ 0.41
CCDC180-203ENST00000472746 UTYO14607 1347 aa17.58■□□□□ 0.4
CCDC180-203ENST00000472746 NBPF7P0C2Y1 421 aaPredicted RBP17.58■□□□□ 0.4
CCDC180-203ENST00000472746 CCDC93Q567U6 631 aa17.58■□□□□ 0.4
CCDC180-203ENST00000472746 TTLL11Q8NHH1 800 aa17.58■□□□□ 0.4
CCDC180-203ENST00000472746 CDC5LQ99459 802 aaKnown RBP17.58■□□□□ 0.4
CCDC180-203ENST00000472746 UBTFL1P0CB47 393 aaPredicted RBP17.57■□□□□ 0.4
CCDC180-203ENST00000472746 GRIPAP1Q4V328 841 aa17.57■□□□□ 0.4
CCDC180-203ENST00000472746 RTKN2Q8IZC4 609 aa17.57■□□□□ 0.4
CCDC180-203ENST00000472746 USP44Q9H0E7 712 aa17.57■□□□□ 0.4
CCDC180-203ENST00000472746 CHMP3Q9Y3E7 222 aa17.57■□□□□ 0.4
CCDC180-203ENST00000472746 COL11A2P13942 1736 aaPredicted RBP17.56■□□□□ 0.4
CCDC180-203ENST00000472746 RPS8P62241 208 aaKnown RBP17.56■□□□□ 0.4
CCDC180-203ENST00000472746 ANKRD18AQ8IVF6 992 aa17.56■□□□□ 0.4
CCDC180-203ENST00000472746 CSF1RP07333 972 aa17.55■□□□□ 0.4
CCDC180-203ENST00000472746 GNAI3P08754 354 aa17.55■□□□□ 0.4
CCDC180-203ENST00000472746 C7orf43Q8WVR3 580 aa17.55■□□□□ 0.4
CCDC180-203ENST00000472746 CELF1Q92879 486 aaKnown RBP17.55■□□□□ 0.4
CCDC180-203ENST00000472746 SUCLG2Q96I99 432 aa17.55■□□□□ 0.4
CCDC180-203ENST00000472746 GREM2Q9H772 168 aa17.55■□□□□ 0.4
CCDC180-203ENST00000472746 SEC31BQ9NQW1 1179 aa17.55■□□□□ 0.4
CCDC180-203ENST00000472746 ATP6V0A2Q9Y487 856 aa17.55■□□□□ 0.4
CCDC180-203ENST00000472746 DLEC1Q9Y238 1755 aa17.55■□□□□ 0.4
CCDC180-203ENST00000472746 ANKRD18BA2A2Z9 1011 aa17.54■□□□□ 0.4
CCDC180-203ENST00000472746 ITGA6P23229 1130 aa17.54■□□□□ 0.4
CCDC180-203ENST00000472746 IGHMBP2P38935 993 aaKnown RBP17.54■□□□□ 0.4
CCDC180-203ENST00000472746 FOXO4P98177 505 aa17.54■□□□□ 0.4
CCDC180-203ENST00000472746 IFIT5Q13325 482 aaKnown RBP17.54■□□□□ 0.4
CCDC180-203ENST00000472746 CCDC57Q2TAC2 916 aa17.54■□□□□ 0.4
CCDC180-203ENST00000472746 LMBR1LQ6UX01 489 aa17.54■□□□□ 0.4
CCDC180-203ENST00000472746 ITPRIPQ8IWB1 547 aa17.54■□□□□ 0.4
CCDC180-203ENST00000472746 SP8Q8IXZ3 490 aa17.54■□□□□ 0.4
CCDC180-203ENST00000472746 TMEM57Q8N5G2 664 aa17.54■□□□□ 0.4
CCDC180-203ENST00000472746 TAOK3Q9H2K8 898 aa17.54■□□□□ 0.4
CCDC180-203ENST00000472746 TNNQ9UQP3 1299 aa17.54■□□□□ 0.4
CCDC180-203ENST00000472746 RTL9Q8NET4 1388 aa17.53■□□□□ 0.4
CCDC180-203ENST00000472746 FAM161AQ3B820 660 aa17.53■□□□□ 0.4
CCDC180-203ENST00000472746 TAF7LQ5H9L4 462 aa17.53■□□□□ 0.4
CCDC180-203ENST00000472746 DDX60Q8IY21 1712 aaKnown RBP17.52■□□□□ 0.4
CCDC180-203ENST00000472746 MPHOSPH8Q99549 860 aa17.52■□□□□ 0.4
CCDC180-203ENST00000472746 BICC1Q9H694 974 aaKnown RBP17.52■□□□□ 0.4
CCDC180-203ENST00000472746 PLIN1O60240 522 aa17.51■□□□□ 0.39
CCDC180-203ENST00000472746 FKBP4Q02790 459 aaKnown RBP eCLIP17.51■□□□□ 0.39
CCDC180-203ENST00000472746 EPHA10Q5JZY3 1008 aa17.51■□□□□ 0.39
CCDC180-203ENST00000472746 OLFM4Q6UX06 510 aa17.51■□□□□ 0.39
CCDC180-203ENST00000472746 MEIS3Q99687 375 aa17.51■□□□□ 0.39
CCDC180-203ENST00000472746 LAMB2P55268 1798 aa17.51■□□□□ 0.39
CCDC180-203ENST00000472746 LTBP3Q9NS15 1303 aa17.5■□□□□ 0.39
CCDC180-203ENST00000472746 BRCA1P38398 1863 aaKnown RBP17.5■□□□□ 0.39
CCDC180-203ENST00000472746 NFKBIEO00221 500 aa17.5■□□□□ 0.39
CCDC180-203ENST00000472746 LMNB1P20700 586 aa17.5■□□□□ 0.39
CCDC180-203ENST00000472746 RASSF7Q02833 373 aa17.5■□□□□ 0.39
CCDC180-203ENST00000472746 DPP8Q6V1X1 898 aaPredicted RBP17.5■□□□□ 0.39
CCDC180-203ENST00000472746 MPNDQ8N594 471 aa17.5■□□□□ 0.39
CCDC180-203ENST00000472746 SUPT20HQ8NEM7 779 aa17.5■□□□□ 0.39
CCDC180-203ENST00000472746 PANK1Q8TE04 598 aa17.5■□□□□ 0.39
CCDC180-203ENST00000472746 CHMP4BQ9H444 224 aaKnown RBP17.5■□□□□ 0.39
CCDC180-203ENST00000472746 GNAI2P04899 355 aa17.49■□□□□ 0.39
CCDC180-203ENST00000472746 RLBP1P12271 317 aa17.49■□□□□ 0.39
CCDC180-203ENST00000472746 PDE3AQ14432 1141 aa17.49■□□□□ 0.39
CCDC180-203ENST00000472746 RABL6Q3YEC7 729 aaPredicted RBP17.49■□□□□ 0.39
CCDC180-203ENST00000472746 KAZALD1Q96I82 304 aa17.49■□□□□ 0.39
CCDC180-203ENST00000472746 PSMD1Q99460 953 aa17.49■□□□□ 0.39
CCDC180-203ENST00000472746 BSDC1Q9NW68 430 aaPredicted RBP17.49■□□□□ 0.39
CCDC180-203ENST00000472746 RNF181Q9P0P0 153 aa17.49■□□□□ 0.39
CCDC180-203ENST00000472746 NSFL1CQ9UNZ2 370 aaKnown RBP17.49■□□□□ 0.39
CCDC180-203ENST00000472746 C9orf131Q5VYM1 1079 aa17.48■□□□□ 0.39
CCDC180-203ENST00000472746 ANKIB1Q9P2G1 1089 aa17.48■□□□□ 0.39
CCDC180-203ENST00000472746 LRRFIP2Q9Y608 721 aaKnown RBP17.48■□□□□ 0.39
CCDC180-203ENST00000472746 SLX4Q8IY92 1834 aa17.48■□□□□ 0.39
CCDC180-203ENST00000472746 ARFGEF1Q9Y6D6 1849 aa17.47■□□□□ 0.39
CCDC180-203ENST00000472746 YY1P25490 414 aa17.47■□□□□ 0.39
CCDC180-203ENST00000472746 ANKRD44Q8N8A2 993 aa17.47■□□□□ 0.39
CCDC180-203ENST00000472746 DDX19BQ9UMR2 479 aa17.47■□□□□ 0.39
CCDC180-203ENST00000472746 MVPQ14764 893 aaKnown RBP17.46■□□□□ 0.39
CCDC180-203ENST00000472746 LDHAL6AQ6ZMR3 332 aa17.46■□□□□ 0.39
CCDC180-203ENST00000472746 ZNF277Q9NRM2 450 aaPredicted RBP17.46■□□□□ 0.39
CCDC180-203ENST00000472746 CNNM1Q9NRU3 951 aa17.46■□□□□ 0.39
CCDC180-203ENST00000472746 COG6Q9Y2V7 657 aa17.46■□□□□ 0.39
CCDC180-203ENST00000472746 C6orf229H3BNL8 230 aa17.45■□□□□ 0.38
CCDC180-203ENST00000472746 ZBTB7BO15156 539 aaPredicted RBP17.45■□□□□ 0.38
CCDC180-203ENST00000472746 RRP1P56182 461 aaKnown RBP17.45■□□□□ 0.38
CCDC180-203ENST00000472746 GPSM2P81274 684 aa17.45■□□□□ 0.38
CCDC180-203ENST00000472746 EYA3Q99504 573 aa17.45■□□□□ 0.38
CCDC180-203ENST00000472746 ANKRD2Q9GZV1 360 aa17.45■□□□□ 0.38
CCDC180-203ENST00000472746 VPS33BQ9H267 617 aa17.45■□□□□ 0.38
CCDC180-203ENST00000472746 XDHP47989 1333 aa17.45■□□□□ 0.38
CCDC180-203ENST00000472746 IARSP41252 1262 aaKnown RBP17.44■□□□□ 0.38
CCDC180-203ENST00000472746 JDP2Q8WYK2 163 aa17.44■□□□□ 0.38
CCDC180-203ENST00000472746 ZNF594Q96JF6 807 aaPredicted RBP17.44■□□□□ 0.38
CCDC180-203ENST00000472746 RTFDC1Q9BY42 306 aaPredicted RBP17.44■□□□□ 0.38
CCDC180-203ENST00000472746 PODXL2Q9NZ53 605 aa17.44■□□□□ 0.38
CCDC180-203ENST00000472746 GGA1Q9UJY5 639 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms