RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 PDE8AO60658 829 aa24.82■■□□□ 1.56
COMMD1-208ENST00000472729 FZD9O00144 591 aa24.81■■□□□ 1.56
COMMD1-208ENST00000472729 GJA3Q9Y6H8 435 aa24.81■■□□□ 1.56
COMMD1-208ENST00000472729 SBF1O95248 1867 aa24.81■■□□□ 1.56
COMMD1-208ENST00000472729 AOC3Q16853 763 aa24.8■■□□□ 1.56
COMMD1-208ENST00000472729 G2E3Q7L622 706 aa24.8■■□□□ 1.56
COMMD1-208ENST00000472729 GPC2Q8N158 579 aa24.8■■□□□ 1.56
COMMD1-208ENST00000472729 NSFL1CQ9UNZ2 370 aaKnown RBP24.8■■□□□ 1.56
COMMD1-208ENST00000472729 FER1L6Q2WGJ9 1857 aa24.79■■□□□ 1.56
COMMD1-208ENST00000472729 CCER2I3L3R5 266 aa24.79■■□□□ 1.56
COMMD1-208ENST00000472729 LMOD1P29536 600 aaPredicted RBP24.79■■□□□ 1.56
COMMD1-208ENST00000472729 RPS8P62241 208 aaKnown RBP24.79■■□□□ 1.56
COMMD1-208ENST00000472729 JARID2Q92833 1246 aaPredicted RBP24.79■■□□□ 1.56
COMMD1-208ENST00000472729 HACL1Q9UJ83 578 aa24.79■■□□□ 1.56
COMMD1-208ENST00000472729 ARFGEF2Q9Y6D5 1785 aa24.79■■□□□ 1.56
COMMD1-208ENST00000472729 ZNF541Q9H0D2 1346 aa24.79■■□□□ 1.56
COMMD1-208ENST00000472729 DNAAF4Q8WXU2 420 aa24.78■■□□□ 1.56
COMMD1-208ENST00000472729 CELF1Q92879 486 aaKnown RBP24.78■■□□□ 1.56
COMMD1-208ENST00000472729 L3MBTL3Q96JM7 780 aaPredicted RBP24.78■■□□□ 1.56
COMMD1-208ENST00000472729 SPINK5Q9NQ38 1064 aaPredicted RBP24.78■■□□□ 1.56
COMMD1-208ENST00000472729 POTECB2RU33 542 aa24.77■■□□□ 1.56
COMMD1-208ENST00000472729 CWF19L2Q2TBE0 894 aaKnown RBP24.77■■□□□ 1.56
COMMD1-208ENST00000472729 EAPPQ56P03 285 aaPredicted RBP24.77■■□□□ 1.56
COMMD1-208ENST00000472729 CCDC85AQ96PX6 553 aaPredicted RBP24.77■■□□□ 1.56
COMMD1-208ENST00000472729 RTFDC1Q9BY42 306 aaPredicted RBP24.77■■□□□ 1.56
COMMD1-208ENST00000472729 NEURL1BA8MQ27 555 aa24.76■■□□□ 1.55
COMMD1-208ENST00000472729 E9PSI1 815 aa24.76■■□□□ 1.55
COMMD1-208ENST00000472729 C6orf229H3BNL8 230 aa24.76■■□□□ 1.55
COMMD1-208ENST00000472729 IGKV5-2P06315 115 aa24.76■■□□□ 1.55
COMMD1-208ENST00000472729 CLEC11AQ9Y240 323 aa24.76■■□□□ 1.55
COMMD1-208ENST00000472729 CACNA1SQ13698 1873 aa24.76■■□□□ 1.55
COMMD1-208ENST00000472729 TIAM2Q8IVF5 1701 aa24.75■■□□□ 1.55
COMMD1-208ENST00000472729 ANKRD36CQ5JPF3 1778 aa24.75■■□□□ 1.55
COMMD1-208ENST00000472729 PNMA8AQ86V59 439 aaPredicted RBP24.75■■□□□ 1.55
COMMD1-208ENST00000472729 ANKRD18AQ8IVF6 992 aa24.75■■□□□ 1.55
COMMD1-208ENST00000472729 ANKIB1Q9P2G1 1089 aa24.75■■□□□ 1.55
COMMD1-208ENST00000472729 ZNRF3Q9ULT6 936 aa24.75■■□□□ 1.55
COMMD1-208ENST00000472729 CDHR2Q9BYE9 1310 aa24.75■■□□□ 1.55
COMMD1-208ENST00000472729 G3V3G9 751 aa24.74■■□□□ 1.55
COMMD1-208ENST00000472729 WASHC4Q2M389 1173 aa24.74■■□□□ 1.55
COMMD1-208ENST00000472729 DCAF8Q5TAQ9 597 aa24.74■■□□□ 1.55
COMMD1-208ENST00000472729 CHADLQ6NUI6 762 aa24.74■■□□□ 1.55
COMMD1-208ENST00000472729 UBE3BQ7Z3V4 1068 aa24.74■■□□□ 1.55
COMMD1-208ENST00000472729 SLC51AQ86UW1 340 aa24.74■■□□□ 1.55
COMMD1-208ENST00000472729 LINS1Q8NG48 757 aa24.74■■□□□ 1.55
COMMD1-208ENST00000472729 CDC5LQ99459 802 aaKnown RBP24.74■■□□□ 1.55
COMMD1-208ENST00000472729 EYA3Q99504 573 aa24.74■■□□□ 1.55
COMMD1-208ENST00000472729 TAF1DQ9H5J8 278 aaPredicted RBP24.74■■□□□ 1.55
COMMD1-208ENST00000472729 EPHX2P34913 555 aa24.73■■□□□ 1.55
COMMD1-208ENST00000472729 CTSWP56202 376 aa24.73■■□□□ 1.55
COMMD1-208ENST00000472729 KIAA2012Q0VF49 1180 aa24.73■■□□□ 1.55
COMMD1-208ENST00000472729 SEC31BQ9NQW1 1179 aa24.73■■□□□ 1.55
COMMD1-208ENST00000472729 SNED1Q8TER0 1413 aa24.72■■□□□ 1.55
COMMD1-208ENST00000472729 GCKRQ14397 625 aa24.72■■□□□ 1.55
COMMD1-208ENST00000472729 LDHDQ86WU2 507 aa24.72■■□□□ 1.55
COMMD1-208ENST00000472729 TNIP1Q15025 636 aa24.71■■□□□ 1.55
COMMD1-208ENST00000472729 ZNF521Q96K83 1311 aa24.7■■□□□ 1.54
COMMD1-208ENST00000472729 GPSM2P81274 684 aa24.7■■□□□ 1.54
COMMD1-208ENST00000472729 ZC3H12CQ9C0D7 883 aaKnown RBP24.7■■□□□ 1.54
COMMD1-208ENST00000472729 H7C1W4 665 aa24.69■■□□□ 1.54
COMMD1-208ENST00000472729 RIMBP2O15034 1052 aa24.69■■□□□ 1.54
COMMD1-208ENST00000472729 CIAPIN1Q6FI81 312 aa24.69■■□□□ 1.54
COMMD1-208ENST00000472729 BCL2L13Q9BXK5 485 aa24.69■■□□□ 1.54
COMMD1-208ENST00000472729 WDR90Q96KV7 1748 aa24.69■■□□□ 1.54
COMMD1-208ENST00000472729 SLC4A10Q6U841 1118 aa24.68■■□□□ 1.54
COMMD1-208ENST00000472729 TTLL11Q8NHH1 800 aa24.68■■□□□ 1.54
COMMD1-208ENST00000472729 GGA1Q9UJY5 639 aa24.68■■□□□ 1.54
COMMD1-208ENST00000472729 F6X3S4 739 aa24.67■■□□□ 1.54
COMMD1-208ENST00000472729 IGHMBP2P38935 993 aaKnown RBP24.67■■□□□ 1.54
COMMD1-208ENST00000472729 CCDC88AQ3V6T2 1871 aa24.66■■□□□ 1.54
COMMD1-208ENST00000472729 RAD17O75943 681 aa24.66■■□□□ 1.54
COMMD1-208ENST00000472729 UFL1O94874 794 aa24.66■■□□□ 1.54
COMMD1-208ENST00000472729 CXCL9Q07325 125 aa24.66■■□□□ 1.54
COMMD1-208ENST00000472729 TBC1D16Q8TBP0 767 aa24.66■■□□□ 1.54
COMMD1-208ENST00000472729 POTEIP0CG38 1075 aa24.65■■□□□ 1.54
COMMD1-208ENST00000472729 POTEJP0CG39 1038 aa24.65■■□□□ 1.54
COMMD1-208ENST00000472729 SLFN5Q08AF3 891 aa24.65■■□□□ 1.54
COMMD1-208ENST00000472729 DIEXFQ68CQ4 756 aaKnown RBP24.65■■□□□ 1.54
COMMD1-208ENST00000472729 GREM2Q9H772 168 aa24.65■■□□□ 1.54
COMMD1-208ENST00000472729 C9orf78Q9NZ63 289 aaPredicted RBP24.65■■□□□ 1.54
COMMD1-208ENST00000472729 POLLQ9UGP5 575 aa24.65■■□□□ 1.54
COMMD1-208ENST00000472729 MPHOSPH8Q99549 860 aa24.64■■□□□ 1.54
COMMD1-208ENST00000472729 PODXL2Q9NZ53 605 aa24.64■■□□□ 1.54
COMMD1-208ENST00000472729 CHMP3Q9Y3E7 222 aa24.64■■□□□ 1.54
COMMD1-208ENST00000472729 DICER1Q9UPY3 1922 aaKnown RBP24.64■■□□□ 1.53
COMMD1-208ENST00000472729 HTRA3P83110 453 aa24.63■■□□□ 1.53
COMMD1-208ENST00000472729 BEND3Q5T5X7 828 aa24.63■■□□□ 1.53
COMMD1-208ENST00000472729 PLA2G12BQ9BX93 195 aa24.63■■□□□ 1.53
COMMD1-208ENST00000472729 SRCIN1Q9C0H9 1055 aa24.63■■□□□ 1.53
COMMD1-208ENST00000472729 DBNDD1Q9H9R9 158 aa24.63■■□□□ 1.53
COMMD1-208ENST00000472729 BSDC1Q9NW68 430 aaPredicted RBP24.63■■□□□ 1.53
COMMD1-208ENST00000472729 XDHP47989 1333 aa24.62■■□□□ 1.53
COMMD1-208ENST00000472729 ATP2B4P23634 1241 aa24.62■■□□□ 1.53
COMMD1-208ENST00000472729 EPS15P42566 896 aa24.62■■□□□ 1.53
COMMD1-208ENST00000472729 SCNN1DP51172 638 aa24.62■■□□□ 1.53
COMMD1-208ENST00000472729 DOK7Q18PE1 504 aa24.62■■□□□ 1.53
COMMD1-208ENST00000472729 USP50Q70EL3 339 aaPredicted RBP24.62■■□□□ 1.53
COMMD1-208ENST00000472729 ITGA6P23229 1130 aa24.61■■□□□ 1.53
COMMD1-208ENST00000472729 GMPSP49915 693 aaPredicted RBP24.61■■□□□ 1.53
COMMD1-208ENST00000472729 ADARB2Q9NS39 739 aaKnown RBP24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms