RNA–Protein interactions for RNA: ENST00000472503.5

TMEM39B-206, Transcript of transmembrane protein 39B, humanhuman

TSL 3

Gene TMEM39B, Length 950 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-206ENST00000472503 EPHA10Q5JZY3 1008 aa16.17■□□□□ 0.18
TMEM39B-206ENST00000472503 SLC10A5Q5PT55 438 aa16.17■□□□□ 0.18
TMEM39B-206ENST00000472503 LRRFIP2Q9Y608 721 aaKnown RBP16.17■□□□□ 0.18
TMEM39B-206ENST00000472503 SH3TC1Q8TE82 1336 aa16.17■□□□□ 0.18
TMEM39B-206ENST00000472503 RABL6Q3YEC7 729 aaPredicted RBP16.16■□□□□ 0.18
TMEM39B-206ENST00000472503 C2CD5Q86YS7 1000 aa16.16■□□□□ 0.18
TMEM39B-206ENST00000472503 SIRT2Q8IXJ6 389 aa16.16■□□□□ 0.18
TMEM39B-206ENST00000472503 CCDC24Q8N4L8 307 aa16.16■□□□□ 0.18
TMEM39B-206ENST00000472503 NYXQ9GZU5 481 aa16.16■□□□□ 0.18
TMEM39B-206ENST00000472503 C1orf115Q9H7X2 142 aa16.16■□□□□ 0.18
TMEM39B-206ENST00000472503 RIC1Q4ADV7 1423 aa16.16■□□□□ 0.18
TMEM39B-206ENST00000472503 TNRC6CQ9HCJ0 1690 aaKnown RBP16.15■□□□□ 0.18
TMEM39B-206ENST00000472503 MTX1Q13505 466 aa16.15■□□□□ 0.18
TMEM39B-206ENST00000472503 RTL5Q5HYW3 569 aaPredicted RBP16.15■□□□□ 0.18
TMEM39B-206ENST00000472503 C9orf131Q5VYM1 1079 aa16.15■□□□□ 0.18
TMEM39B-206ENST00000472503 CEP85Q6P2H3 762 aa16.15■□□□□ 0.18
TMEM39B-206ENST00000472503 TPTE2Q6XPS3 522 aa16.15■□□□□ 0.18
TMEM39B-206ENST00000472503 ANKRD44Q8N8A2 993 aa16.15■□□□□ 0.18
TMEM39B-206ENST00000472503 HDAC5Q9UQL6 1122 aa16.15■□□□□ 0.18
TMEM39B-206ENST00000472503 ABCC12Q96J65 1359 aa16.14■□□□□ 0.17
TMEM39B-206ENST00000472503 CCDC88AQ3V6T2 1871 aa16.14■□□□□ 0.17
TMEM39B-206ENST00000472503 FAM177BA6PVY3 158 aa16.14■□□□□ 0.17
TMEM39B-206ENST00000472503 H0YIN7 160 aa16.14■□□□□ 0.17
TMEM39B-206ENST00000472503 IRS4O14654 1257 aaPredicted RBP16.14■□□□□ 0.17
TMEM39B-206ENST00000472503 CSF1RP07333 972 aa16.14■□□□□ 0.17
TMEM39B-206ENST00000472503 ATP8B2P98198 1209 aa16.14■□□□□ 0.17
TMEM39B-206ENST00000472503 ERFEQ4G0M1 354 aa16.14■□□□□ 0.17
TMEM39B-206ENST00000472503 PRR5LQ6MZQ0 368 aa16.14■□□□□ 0.17
TMEM39B-206ENST00000472503 NBPF5PQ86XG9 351 aaPredicted RBP16.14■□□□□ 0.17
TMEM39B-206ENST00000472503 NUTM1Q86Y26 1132 aa16.14■□□□□ 0.17
TMEM39B-206ENST00000472503 RPAP2Q8IXW5 612 aaPredicted RBP16.14■□□□□ 0.17
TMEM39B-206ENST00000472503 CNBD1Q8NA66 436 aa16.14■□□□□ 0.17
TMEM39B-206ENST00000472503 BICC1Q9H694 974 aaKnown RBP16.14■□□□□ 0.17
TMEM39B-206ENST00000472503 RNF181Q9P0P0 153 aa16.14■□□□□ 0.17
TMEM39B-206ENST00000472503 GTF3C3Q9Y5Q9 886 aa16.14■□□□□ 0.17
TMEM39B-206ENST00000472503 TIAM2Q8IVF5 1701 aa16.14■□□□□ 0.17
TMEM39B-206ENST00000472503 PDE8AO60658 829 aa16.13■□□□□ 0.17
TMEM39B-206ENST00000472503 RASSF7Q02833 373 aa16.13■□□□□ 0.17
TMEM39B-206ENST00000472503 ST5P78524 1137 aa16.12■□□□□ 0.17
TMEM39B-206ENST00000472503 TTLL6Q8N841 843 aa16.12■□□□□ 0.17
TMEM39B-206ENST00000472503 ZNF622Q969S3 477 aaKnown RBP eCLIP16.12■□□□□ 0.17
TMEM39B-206ENST00000472503 PPP4R2Q9NY27 417 aa16.12■□□□□ 0.17
TMEM39B-206ENST00000472503 TAF1P21675 1872 aa16.12■□□□□ 0.17
TMEM39B-206ENST00000472503 PNMA6EA0A0J9YXQ4 647 aa16.11■□□□□ 0.17
TMEM39B-206ENST00000472503 HCLS1P14317 486 aaPredicted RBP16.11■□□□□ 0.17
TMEM39B-206ENST00000472503 PDE6BP35913 854 aa16.11■□□□□ 0.17
TMEM39B-206ENST00000472503 HDAC1Q13547 482 aaPredicted RBP16.11■□□□□ 0.17
TMEM39B-206ENST00000472503 POLA2Q14181 598 aa16.11■□□□□ 0.17
TMEM39B-206ENST00000472503 TTLL11Q8NHH1 800 aa16.11■□□□□ 0.17
TMEM39B-206ENST00000472503 SSH3Q8TE77 659 aa16.11■□□□□ 0.17
TMEM39B-206ENST00000472503 KLRG2A4D1S0 409 aaPredicted RBP16.1■□□□□ 0.17
TMEM39B-206ENST00000472503 IGHDP01880 384 aa16.1■□□□□ 0.17
TMEM39B-206ENST00000472503 CTSWP56202 376 aa16.1■□□□□ 0.17
TMEM39B-206ENST00000472503 SF3B3Q15393 1217 aaKnown RBP16.1■□□□□ 0.17
TMEM39B-206ENST00000472503 LMBR1LQ6UX01 489 aa16.1■□□□□ 0.17
TMEM39B-206ENST00000472503 C3orf67Q6ZVT6 689 aa16.1■□□□□ 0.17
TMEM39B-206ENST00000472503 ZNF219Q9P2Y4 722 aaPredicted RBP16.1■□□□□ 0.17
TMEM39B-206ENST00000472503 KIF3CO14782 793 aa16.09■□□□□ 0.17
TMEM39B-206ENST00000472503 HSP90B1P14625 803 aaKnown RBP16.09■□□□□ 0.17
TMEM39B-206ENST00000472503 RFX5P48382 616 aaPredicted RBP16.09■□□□□ 0.17
TMEM39B-206ENST00000472503 BRIP1Q9BX63 1249 aa16.09■□□□□ 0.17
TMEM39B-206ENST00000472503 NMRK2Q9NPI5 230 aa16.09■□□□□ 0.17
TMEM39B-206ENST00000472503 RTL9Q8NET4 1388 aa16.09■□□□□ 0.17
TMEM39B-206ENST00000472503 GTF2E1P29083 439 aaPredicted RBP16.08■□□□□ 0.16
TMEM39B-206ENST00000472503 COL4A1P02462 1669 aa16.08■□□□□ 0.16
TMEM39B-206ENST00000472503 SLX4Q8IY92 1834 aa16.08■□□□□ 0.16
TMEM39B-206ENST00000472503 CRY2Q49AN0 593 aa16.07■□□□□ 0.16
TMEM39B-206ENST00000472503 PDZRN3Q9UPQ7 1066 aa16.07■□□□□ 0.16
TMEM39B-206ENST00000472503 KDM2BQ8NHM5 1336 aa16.07■□□□□ 0.16
TMEM39B-206ENST00000472503 SPEF2Q9C093 1822 aa16.07■□□□□ 0.16
TMEM39B-206ENST00000472503 FER1L6Q2WGJ9 1857 aa16.07■□□□□ 0.16
TMEM39B-206ENST00000472503 SRGAP3O43295 1099 aa16.06■□□□□ 0.16
TMEM39B-206ENST00000472503 NLRP3Q96P20 1036 aa16.06■□□□□ 0.16
TMEM39B-206ENST00000472503 GREM2Q9H772 168 aa16.06■□□□□ 0.16
TMEM39B-206ENST00000472503 C21orf2O43822 256 aa16.05■□□□□ 0.16
TMEM39B-206ENST00000472503 LMNB1P20700 586 aa16.05■□□□□ 0.16
TMEM39B-206ENST00000472503 PTPN12Q05209 780 aaKnown RBP16.05■□□□□ 0.16
TMEM39B-206ENST00000472503 FAM161AQ3B820 660 aa16.05■□□□□ 0.16
TMEM39B-206ENST00000472503 CCDC152Q4G0S7 254 aa16.05■□□□□ 0.16
TMEM39B-206ENST00000472503 B4GALNT3Q6L9W6 998 aa16.05■□□□□ 0.16
TMEM39B-206ENST00000472503 C16orf71Q8IYS4 520 aaPredicted RBP16.05■□□□□ 0.16
TMEM39B-206ENST00000472503 RWDD1Q9H446 243 aaPredicted RBP16.05■□□□□ 0.16
TMEM39B-206ENST00000472503 DCTPP1Q9H773 170 aa16.05■□□□□ 0.16
TMEM39B-206ENST00000472503 COPRSQ9NQ92 184 aa16.05■□□□□ 0.16
TMEM39B-206ENST00000472503 NOP58Q9Y2X3 529 aaKnown RBP16.05■□□□□ 0.16
TMEM39B-206ENST00000472503 DICER1Q9UPY3 1922 aaKnown RBP16.05■□□□□ 0.16
TMEM39B-206ENST00000472503 NFKBIEO00221 500 aa16.04■□□□□ 0.16
TMEM39B-206ENST00000472503 HMMRO75330 724 aa16.04■□□□□ 0.16
TMEM39B-206ENST00000472503 HSPA6P17066 643 aa16.04■□□□□ 0.16
TMEM39B-206ENST00000472503 SMC5Q8IY18 1101 aa16.04■□□□□ 0.16
TMEM39B-206ENST00000472503 CCDC136Q96JN2 1154 aa16.04■□□□□ 0.16
TMEM39B-206ENST00000472503 A0A1B0GUL6 1792 aa16.04■□□□□ 0.16
TMEM39B-206ENST00000472503 ITGA6P23229 1130 aa16.03■□□□□ 0.16
TMEM39B-206ENST00000472503 HOXA10P31260 410 aaPredicted RBP16.03■□□□□ 0.16
TMEM39B-206ENST00000472503 STYK1Q6J9G0 422 aa16.03■□□□□ 0.16
TMEM39B-206ENST00000472503 PRPF40BQ6NWY9 871 aaKnown RBP16.03■□□□□ 0.16
TMEM39B-206ENST00000472503 CNKSR1Q969H4 720 aa16.03■□□□□ 0.16
TMEM39B-206ENST00000472503 MASTLQ96GX5 879 aa16.03■□□□□ 0.16
TMEM39B-206ENST00000472503 SEC31BQ9NQW1 1179 aa16.03■□□□□ 0.16
TMEM39B-206ENST00000472503 TOMM70O94826 608 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms