RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 PHF14O94880 888 aa15.84■□□□□ 0.13
SCAMP4-207ENST00000472442 EAF2Q96CJ1 260 aaPredicted RBP15.84■□□□□ 0.13
SCAMP4-207ENST00000472442 PALD1Q9ULE6 856 aa15.84■□□□□ 0.13
SCAMP4-207ENST00000472442 ADAMTS2O95450 1211 aa15.84■□□□□ 0.13
SCAMP4-207ENST00000472442 G3BP1Q13283 466 aaKnown RBP eCLIP15.84■□□□□ 0.13
SCAMP4-207ENST00000472442 ZBTB3Q9H5J0 574 aa15.84■□□□□ 0.13
SCAMP4-207ENST00000472442 MCM2P49736 904 aa15.83■□□□□ 0.12
SCAMP4-207ENST00000472442 HMGN5P82970 282 aaKnown RBP15.83■□□□□ 0.12
SCAMP4-207ENST00000472442 DNAJC10Q8IXB1 793 aa15.83■□□□□ 0.12
SCAMP4-207ENST00000472442 UTP14CQ5TAP6 766 aaKnown RBP15.83■□□□□ 0.12
SCAMP4-207ENST00000472442 AACSQ86V21 672 aa15.83■□□□□ 0.12
SCAMP4-207ENST00000472442 H7C1W4 665 aa15.82■□□□□ 0.12
SCAMP4-207ENST00000472442 CBX1P83916 185 aa15.82■□□□□ 0.12
SCAMP4-207ENST00000472442 USP48Q86UV5 1035 aa15.82■□□□□ 0.12
SCAMP4-207ENST00000472442 ECHDC1Q9NTX5 307 aa15.82■□□□□ 0.12
SCAMP4-207ENST00000472442 PHLPP1O60346 1717 aa15.82■□□□□ 0.12
SCAMP4-207ENST00000472442 BCL9O00512 1426 aa15.82■□□□□ 0.12
SCAMP4-207ENST00000472442 EXOC5O00471 708 aa15.82■□□□□ 0.12
SCAMP4-207ENST00000472442 GLRX3O76003 335 aaKnown RBP15.82■□□□□ 0.12
SCAMP4-207ENST00000472442 PTPN12Q05209 780 aaKnown RBP15.82■□□□□ 0.12
SCAMP4-207ENST00000472442 TPRNQ4KMQ1 711 aa15.82■□□□□ 0.12
SCAMP4-207ENST00000472442 COPRSQ9NQ92 184 aa15.82■□□□□ 0.12
SCAMP4-207ENST00000472442 ADCY5O95622 1261 aa15.81■□□□□ 0.12
SCAMP4-207ENST00000472442 IFIT2P09913 472 aaKnown RBP15.81■□□□□ 0.12
SCAMP4-207ENST00000472442 GTF2F1P35269 517 aaKnown RBP eCLIP15.81■□□□□ 0.12
SCAMP4-207ENST00000472442 FAM184AQ8NB25 1140 aa15.81■□□□□ 0.12
SCAMP4-207ENST00000472442 SLC4A9Q96Q91 983 aa15.81■□□□□ 0.12
SCAMP4-207ENST00000472442 TLR7Q9NYK1 1049 aaKnown RBP15.81■□□□□ 0.12
SCAMP4-207ENST00000472442 FOXO4P98177 505 aa15.81■□□□□ 0.12
SCAMP4-207ENST00000472442 CCDC8Q9H0W5 538 aaPredicted RBP15.81■□□□□ 0.12
SCAMP4-207ENST00000472442 TJP1Q07157 1748 aa15.81■□□□□ 0.12
SCAMP4-207ENST00000472442 WNK3Q9BYP7 1800 aa15.81■□□□□ 0.12
SCAMP4-207ENST00000472442 CNTROBQ8N137 903 aa15.81■□□□□ 0.12
SCAMP4-207ENST00000472442 INTS4Q96HW7 963 aaKnown RBP15.81■□□□□ 0.12
SCAMP4-207ENST00000472442 ANO2Q9NQ90 1003 aa15.81■□□□□ 0.12
SCAMP4-207ENST00000472442 UVSSAQ2YD98 709 aa15.8■□□□□ 0.12
SCAMP4-207ENST00000472442 UPF3BQ9BZI7 483 aaKnown RBP15.8■□□□□ 0.12
SCAMP4-207ENST00000472442 CWC25Q9NXE8 425 aaPredicted RBP15.8■□□□□ 0.12
SCAMP4-207ENST00000472442 HCLS1P14317 486 aaPredicted RBP15.8■□□□□ 0.12
SCAMP4-207ENST00000472442 PPP4R3BQ5MIZ7 849 aa15.8■□□□□ 0.12
SCAMP4-207ENST00000472442 KIF3AQ9Y496 699 aa15.8■□□□□ 0.12
SCAMP4-207ENST00000472442 LRP6O75581 1613 aa15.79■□□□□ 0.12
SCAMP4-207ENST00000472442 MCCP23508 829 aa15.79■□□□□ 0.12
SCAMP4-207ENST00000472442 NRAPQ86VF7 1730 aa15.79■□□□□ 0.12
SCAMP4-207ENST00000472442 SPATA31A1Q5TZJ5 1347 aa15.79■□□□□ 0.12
SCAMP4-207ENST00000472442 ATP2B3Q16720 1220 aa15.79■□□□□ 0.12
SCAMP4-207ENST00000472442 LMBR1LQ6UX01 489 aa15.79■□□□□ 0.12
SCAMP4-207ENST00000472442 SGSM2O43147 1006 aa15.78■□□□□ 0.12
SCAMP4-207ENST00000472442 CCDC191Q8NCU4 936 aa15.78■□□□□ 0.12
SCAMP4-207ENST00000472442 TEX13AQ9BXU3 409 aaPredicted RBP15.78■□□□□ 0.12
SCAMP4-207ENST00000472442 PIP4K2BP78356 416 aa15.78■□□□□ 0.12
SCAMP4-207ENST00000472442 ZNF330Q9Y3S2 320 aaPredicted RBP15.78■□□□□ 0.12
SCAMP4-207ENST00000472442 CCDC183Q5T5S1 534 aa15.78■□□□□ 0.12
SCAMP4-207ENST00000472442 ISCA1Q9BUE6 129 aa15.78■□□□□ 0.12
SCAMP4-207ENST00000472442 BCL2L12Q9HB09 334 aa15.78■□□□□ 0.12
SCAMP4-207ENST00000472442 SPTLC3Q9NUV7 552 aa15.78■□□□□ 0.12
SCAMP4-207ENST00000472442 SYTL4Q96C24 671 aaPredicted RBP15.77■□□□□ 0.12
SCAMP4-207ENST00000472442 GPATCH3Q96I76 525 aa15.77■□□□□ 0.12
SCAMP4-207ENST00000472442 WDR33Q9C0J8 1336 aaKnown RBP15.77■□□□□ 0.12
SCAMP4-207ENST00000472442 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.77■□□□□ 0.11
SCAMP4-207ENST00000472442 NUTM2BA6NNL0 878 aaPredicted RBP15.77■□□□□ 0.11
SCAMP4-207ENST00000472442 NUTM2EB1AL46 878 aaPredicted RBP15.77■□□□□ 0.11
SCAMP4-207ENST00000472442 PLCB2Q00722 1185 aa15.77■□□□□ 0.11
SCAMP4-207ENST00000472442 NUTM2AQ8IVF1 878 aaPredicted RBP15.77■□□□□ 0.11
SCAMP4-207ENST00000472442 KAT6BQ8WYB5 2073 aa15.76■□□□□ 0.11
SCAMP4-207ENST00000472442 A0A0U1RQG5 324 aaPredicted RBP15.76■□□□□ 0.11
SCAMP4-207ENST00000472442 STARD3NLO95772 234 aa15.76■□□□□ 0.11
SCAMP4-207ENST00000472442 TFCP2Q12800 502 aa15.76■□□□□ 0.11
SCAMP4-207ENST00000472442 CWC27Q6UX04 472 aaKnown RBP15.76■□□□□ 0.11
SCAMP4-207ENST00000472442 CYP19A1P11511 503 aaPredicted RBP15.76■□□□□ 0.11
SCAMP4-207ENST00000472442 ANAPC15P60006 121 aa15.76■□□□□ 0.11
SCAMP4-207ENST00000472442 TCIRG1Q13488 830 aa15.76■□□□□ 0.11
SCAMP4-207ENST00000472442 IL17RAQ96F46 866 aa15.76■□□□□ 0.11
SCAMP4-207ENST00000472442 CNPY2Q9Y2B0 182 aa15.76■□□□□ 0.11
SCAMP4-207ENST00000472442 LSG1Q9H089 658 aaKnown RBP15.75■□□□□ 0.11
SCAMP4-207ENST00000472442 THRAP3Q9Y2W1 955 aaKnown RBP15.75■□□□□ 0.11
SCAMP4-207ENST00000472442 DOT1LQ8TEK3 1739 aa15.75■□□□□ 0.11
SCAMP4-207ENST00000472442 TNNI3KQ59H18 835 aa15.75■□□□□ 0.11
SCAMP4-207ENST00000472442 DBNLQ9UJU6 430 aaKnown RBP15.75■□□□□ 0.11
SCAMP4-207ENST00000472442 FPGT-TNNI3KV9GXZ4 949 aa15.75■□□□□ 0.11
SCAMP4-207ENST00000472442 EPB41L2O43491 1005 aaKnown RBP15.74■□□□□ 0.11
SCAMP4-207ENST00000472442 HSPA4P34932 840 aa15.74■□□□□ 0.11
SCAMP4-207ENST00000472442 EVI5LQ96CN4 794 aa15.74■□□□□ 0.11
SCAMP4-207ENST00000472442 CDCA7Q9BWT1 371 aaPredicted RBP15.74■□□□□ 0.11
SCAMP4-207ENST00000472442 BOLA2Q9H3K6 86 aa15.74■□□□□ 0.11
SCAMP4-207ENST00000472442 SPDYE4A6NLX3 237 aa15.74■□□□□ 0.11
SCAMP4-207ENST00000472442 KDM4AO75164 1064 aa15.74■□□□□ 0.11
SCAMP4-207ENST00000472442 DDB1Q16531 1140 aa15.74■□□□□ 0.11
SCAMP4-207ENST00000472442 SPATA31A5Q5VU36 1347 aa15.74■□□□□ 0.11
SCAMP4-207ENST00000472442 ATG9AQ7Z3C6 839 aa15.74■□□□□ 0.11
SCAMP4-207ENST00000472442 SPATA31A7Q8IWB4 1347 aa15.74■□□□□ 0.11
SCAMP4-207ENST00000472442 RAD50Q92878 1312 aa15.74■□□□□ 0.11
SCAMP4-207ENST00000472442 RPAP1Q9BWH6 1393 aaPredicted RBP15.74■□□□□ 0.11
SCAMP4-207ENST00000472442 CHMP3Q9Y3E7 222 aa15.74■□□□□ 0.11
SCAMP4-207ENST00000472442 TOM1O60784 492 aa15.73■□□□□ 0.11
SCAMP4-207ENST00000472442 TRIM28Q13263 835 aaKnown RBP15.73■□□□□ 0.11
SCAMP4-207ENST00000472442 HLFQ16534 295 aa15.73■□□□□ 0.11
SCAMP4-207ENST00000472442 PDCL2Q8N4E4 241 aa15.73■□□□□ 0.11
SCAMP4-207ENST00000472442 TMEM87AQ8NBN3 555 aa15.73■□□□□ 0.11
SCAMP4-207ENST00000472442 GTPBP4Q9BZE4 634 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms