RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 JCADQ9P266 1359 aa10.89□□□□□ -0.67
SCAF4-205ENST00000472318 FAM135AQ9P2D6 1515 aa10.89□□□□□ -0.67
SCAF4-205ENST00000472318 C2CD2LO14523 706 aa10.88□□□□□ -0.67
SCAF4-205ENST00000472318 BMP4P12644 408 aa10.88□□□□□ -0.67
SCAF4-205ENST00000472318 TPCN2Q8NHX9 752 aa10.88□□□□□ -0.67
SCAF4-205ENST00000472318 ZDHHC1Q8WTX9 485 aa10.88□□□□□ -0.67
SCAF4-205ENST00000472318 GLMNQ92990 594 aa10.88□□□□□ -0.67
SCAF4-205ENST00000472318 MIA2Q96PC5 1412 aa10.88□□□□□ -0.67
SCAF4-205ENST00000472318 UGGT1Q9NYU2 1555 aa10.88□□□□□ -0.67
SCAF4-205ENST00000472318 SETBP1Q9Y6X0 1596 aa10.87□□□□□ -0.67
SCAF4-205ENST00000472318 CLIP1P30622 1438 aa10.87□□□□□ -0.67
SCAF4-205ENST00000472318 ZBTB7BO15156 539 aaPredicted RBP10.87□□□□□ -0.67
SCAF4-205ENST00000472318 TRIM26Q12899 539 aaPredicted RBP10.87□□□□□ -0.67
SCAF4-205ENST00000472318 TEAD4Q15561 434 aa10.87□□□□□ -0.67
SCAF4-205ENST00000472318 ARSJQ5FYB0 599 aaPredicted RBP10.87□□□□□ -0.67
SCAF4-205ENST00000472318 SLCO4C1Q6ZQN7 724 aa10.87□□□□□ -0.67
SCAF4-205ENST00000472318 C1orf229Q6ZS94 237 aaPredicted RBP10.87□□□□□ -0.67
SCAF4-205ENST00000472318 GOLGA6L1Q8N7Z2 621 aa10.87□□□□□ -0.67
SCAF4-205ENST00000472318 ZIC5Q96T25 663 aa10.87□□□□□ -0.67
SCAF4-205ENST00000472318 ZNF777Q9ULD5 760 aaPredicted RBP10.87□□□□□ -0.67
SCAF4-205ENST00000472318 PZPP20742 1482 aa10.87□□□□□ -0.67
SCAF4-205ENST00000472318 ROBO1Q9Y6N7 1651 aa10.86□□□□□ -0.67
SCAF4-205ENST00000472318 ATP7AQ04656 1500 aa10.86□□□□□ -0.67
SCAF4-205ENST00000472318 SHISA8B8ZZ34 492 aa10.86□□□□□ -0.67
SCAF4-205ENST00000472318 ATXN7O15265 892 aaPredicted RBP10.86□□□□□ -0.67
SCAF4-205ENST00000472318 CTBSQ01459 385 aa10.86□□□□□ -0.67
SCAF4-205ENST00000472318 SLC9A9Q8IVB4 645 aa10.86□□□□□ -0.67
SCAF4-205ENST00000472318 HCN2Q9UL51 889 aa10.86□□□□□ -0.67
SCAF4-205ENST00000472318 PARP3Q9Y6F1 533 aa10.86□□□□□ -0.67
SCAF4-205ENST00000472318 PREX2Q70Z35 1606 aa10.86□□□□□ -0.67
SCAF4-205ENST00000472318 TMEM94Q12767 1356 aa10.86□□□□□ -0.67
SCAF4-205ENST00000472318 CNTNAP5Q8WYK1 1306 aa10.85□□□□□ -0.67
SCAF4-205ENST00000472318 PHF20L1A8MW92 1017 aa10.85□□□□□ -0.67
SCAF4-205ENST00000472318 FAM157BP0CG42 384 aa10.85□□□□□ -0.67
SCAF4-205ENST00000472318 TXLNAP40222 546 aa10.85□□□□□ -0.67
SCAF4-205ENST00000472318 SAMD5Q5TGI4 173 aa10.85□□□□□ -0.67
SCAF4-205ENST00000472318 MEX3CQ5U5Q3 659 aaKnown RBP10.85□□□□□ -0.67
SCAF4-205ENST00000472318 CCDC102BQ68D86 513 aa10.85□□□□□ -0.67
SCAF4-205ENST00000472318 PODNQ7Z5L7 613 aa10.85□□□□□ -0.67
SCAF4-205ENST00000472318 TNS4Q8IZW8 715 aa10.85□□□□□ -0.67
SCAF4-205ENST00000472318 SIX5Q8N196 739 aa10.85□□□□□ -0.67
SCAF4-205ENST00000472318 LARGE2Q8N3Y3 721 aa10.85□□□□□ -0.67
SCAF4-205ENST00000472318 L3MBTL2Q969R5 705 aa10.85□□□□□ -0.67
SCAF4-205ENST00000472318 NLRP1Q9C000 1473 aa10.85□□□□□ -0.67
SCAF4-205ENST00000472318 CDK12Q9NYV4 1490 aaPredicted RBP10.85□□□□□ -0.67
SCAF4-205ENST00000472318 SYCP2Q9BX26 1530 aa10.84□□□□□ -0.67
SCAF4-205ENST00000472318 XIRP1Q702N8 1843 aaKnown RBP10.84□□□□□ -0.67
SCAF4-205ENST00000472318 DCDC2BA2VCK2 349 aa10.84□□□□□ -0.67
SCAF4-205ENST00000472318 TNP2Q05952 138 aa10.84□□□□□ -0.67
SCAF4-205ENST00000472318 FAM182BQ5T319 152 aa10.84□□□□□ -0.67
SCAF4-205ENST00000472318 OGFOD1Q8N543 542 aa10.84□□□□□ -0.67
SCAF4-205ENST00000472318 BEND7Q8N7W2 519 aaPredicted RBP10.84□□□□□ -0.67
SCAF4-205ENST00000472318 GALNT6Q8NCL4 622 aa10.84□□□□□ -0.67
SCAF4-205ENST00000472318 MKRN1Q9UHC7 482 aaKnown RBP10.84□□□□□ -0.67
SCAF4-205ENST00000472318 PALM3A6NDB9 673 aaPredicted RBP10.83□□□□□ -0.68
SCAF4-205ENST00000472318 A6NJR5 290 aa10.83□□□□□ -0.68
SCAF4-205ENST00000472318 M0R2N6 131 aa10.83□□□□□ -0.68
SCAF4-205ENST00000472318 ARAFP10398 606 aa10.83□□□□□ -0.68
SCAF4-205ENST00000472318 MAPTP10636 758 aaKnown RBP10.83□□□□□ -0.68
SCAF4-205ENST00000472318 LTKP29376 864 aa10.83□□□□□ -0.68
SCAF4-205ENST00000472318 NOS2P35228 1153 aa10.83□□□□□ -0.68
SCAF4-205ENST00000472318 KDM5DQ9BY66 1539 aa10.83□□□□□ -0.68
SCAF4-205ENST00000472318 ZC3H13Q5T200 1668 aaKnown RBP10.82□□□□□ -0.68
SCAF4-205ENST00000472318 EML1O00423 815 aa10.82□□□□□ -0.68
SCAF4-205ENST00000472318 DKK1O94907 266 aa10.82□□□□□ -0.68
SCAF4-205ENST00000472318 TBCELQ5QJ74 424 aa10.82□□□□□ -0.68
SCAF4-205ENST00000472318 EDARADDQ8WWZ3 215 aa10.82□□□□□ -0.68
SCAF4-205ENST00000472318 GGA1Q9UJY5 639 aa10.82□□□□□ -0.68
SCAF4-205ENST00000472318 MAFBQ9Y5Q3 323 aaPredicted RBP10.82□□□□□ -0.68
SCAF4-205ENST00000472318 GPC6Q9Y625 555 aaPredicted RBP10.82□□□□□ -0.68
SCAF4-205ENST00000472318 RGS12O14924 1447 aa10.82□□□□□ -0.68
SCAF4-205ENST00000472318 SPATA31A6Q5VVP1 1343 aa10.82□□□□□ -0.68
SCAF4-205ENST00000472318 INO80Q9ULG1 1556 aaPredicted RBP10.82□□□□□ -0.68
SCAF4-205ENST00000472318 BICDL1Q6ZP65 573 aa10.81□□□□□ -0.68
SCAF4-205ENST00000472318 MAP3K1Q13233 1512 aa10.8□□□□□ -0.68
SCAF4-205ENST00000472318 KHNYNO15037 678 aaKnown RBP10.8□□□□□ -0.68
SCAF4-205ENST00000472318 EFSO43281 561 aa10.8□□□□□ -0.68
SCAF4-205ENST00000472318 CD33P20138 364 aa10.8□□□□□ -0.68
SCAF4-205ENST00000472318 HIRAP54198 1017 aaPredicted RBP10.8□□□□□ -0.68
SCAF4-205ENST00000472318 SNRPNP63162 240 aaKnown RBP10.8□□□□□ -0.68
SCAF4-205ENST00000472318 C7orf43Q8WVR3 580 aa10.8□□□□□ -0.68
SCAF4-205ENST00000472318 TSPAN10Q9H1Z9 355 aaPredicted RBP10.8□□□□□ -0.68
SCAF4-205ENST00000472318 GJA3Q9Y6H8 435 aa10.8□□□□□ -0.68
SCAF4-205ENST00000472318 FMN1Q68DA7 1419 aa10.8□□□□□ -0.68
SCAF4-205ENST00000472318 SERTM1A2A2V5 107 aa10.79□□□□□ -0.68
SCAF4-205ENST00000472318 EPXP11678 715 aa10.79□□□□□ -0.68
SCAF4-205ENST00000472318 PSMA6P60900 246 aaKnown RBP10.79□□□□□ -0.68
SCAF4-205ENST00000472318 SH3PXD2AQ5TCZ1 1133 aa10.79□□□□□ -0.68
SCAF4-205ENST00000472318 ZNF594Q96JF6 807 aaPredicted RBP10.79□□□□□ -0.68
SCAF4-205ENST00000472318 AVENQ9NQS1 362 aaPredicted RBP10.79□□□□□ -0.68
SCAF4-205ENST00000472318 SLAIN2Q9P270 581 aa10.79□□□□□ -0.68
SCAF4-205ENST00000472318 TFIP11Q9UBB9 837 aaKnown RBP10.79□□□□□ -0.68
SCAF4-205ENST00000472318 ZNF232Q9UNY5 417 aa10.79□□□□□ -0.68
SCAF4-205ENST00000472318 SCAF11Q99590 1463 aaKnown RBP10.79□□□□□ -0.68
SCAF4-205ENST00000472318 WASHC2CQ9Y4E1 1318 aa10.79□□□□□ -0.68
SCAF4-205ENST00000472318 KIF3BO15066 747 aa10.78□□□□□ -0.68
SCAF4-205ENST00000472318 HOXB4P17483 251 aaPredicted RBP10.78□□□□□ -0.68
SCAF4-205ENST00000472318 LAMC2Q13753 1193 aa10.78□□□□□ -0.68
SCAF4-205ENST00000472318 TXNDC2Q86VQ3 553 aa10.78□□□□□ -0.68
SCAF4-205ENST00000472318 DCAF5Q96JK2 942 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms