RNA–Protein interactions for RNA: ENST00000472230.5

GCFC2-208, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2

Gene GCFC2, Length 2,265 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-208ENST00000472230 NEUROD6Q96NK8 337 aa22.22■■□□□ 1.15
GCFC2-208ENST00000472230 CAMTA2O94983 1202 aa22.21■■□□□ 1.15
GCFC2-208ENST00000472230 CTSWP56202 376 aa22.21■■□□□ 1.15
GCFC2-208ENST00000472230 DBNDD2Q9BQY9 259 aa22.21■■□□□ 1.15
GCFC2-208ENST00000472230 ATRNO75882 1429 aa22.21■■□□□ 1.15
GCFC2-208ENST00000472230 UBN2Q6ZU65 1347 aa22.21■■□□□ 1.15
GCFC2-208ENST00000472230 PDE8AO60658 829 aa22.2■■□□□ 1.15
GCFC2-208ENST00000472230 CEP126Q9P2H0 1117 aa22.2■■□□□ 1.15
GCFC2-208ENST00000472230 ZNF652Q9Y2D9 606 aa22.2■■□□□ 1.15
GCFC2-208ENST00000472230 LINC00116Q8NCU8 138 aa22.2■■□□□ 1.14
GCFC2-208ENST00000472230 FSD1Q9BTV5 496 aa22.2■■□□□ 1.14
GCFC2-208ENST00000472230 K7ELQ4 463 aaPredicted RBP22.19■■□□□ 1.14
GCFC2-208ENST00000472230 PARP10Q53GL7 1025 aa22.19■■□□□ 1.14
GCFC2-208ENST00000472230 PUS3Q9BZE2 481 aaKnown RBP22.19■■□□□ 1.14
GCFC2-208ENST00000472230 ANKRD18BA2A2Z9 1011 aa22.19■■□□□ 1.14
GCFC2-208ENST00000472230 ST18O60284 1047 aa22.19■■□□□ 1.14
GCFC2-208ENST00000472230 FAM182BQ5T319 152 aa22.19■■□□□ 1.14
GCFC2-208ENST00000472230 TTLL11Q8NHH1 800 aa22.19■■□□□ 1.14
GCFC2-208ENST00000472230 HSP90AA1P07900 732 aaKnown RBP22.18■■□□□ 1.14
GCFC2-208ENST00000472230 UTP14AQ9BVJ6 771 aaKnown RBP22.18■■□□□ 1.14
GCFC2-208ENST00000472230 ANAPC15P60006 121 aa22.18■■□□□ 1.14
GCFC2-208ENST00000472230 AK7Q96M32 723 aa22.18■■□□□ 1.14
GCFC2-208ENST00000472230 IL25Q9H293 177 aa22.18■■□□□ 1.14
GCFC2-208ENST00000472230 AKAP2Q9Y2D5 859 aa22.18■■□□□ 1.14
GCFC2-208ENST00000472230 ZNF609O15014 1411 aa22.17■■□□□ 1.14
GCFC2-208ENST00000472230 BCORQ6W2J9 1755 aa22.17■■□□□ 1.14
GCFC2-208ENST00000472230 ITGA6P23229 1130 aa22.17■■□□□ 1.14
GCFC2-208ENST00000472230 SUSD4Q5VX71 490 aa22.17■■□□□ 1.14
GCFC2-208ENST00000472230 PTF1AQ7RTS3 328 aa22.17■■□□□ 1.14
GCFC2-208ENST00000472230 SH3TC1Q8TE82 1336 aa22.17■■□□□ 1.14
GCFC2-208ENST00000472230 CNTNAP4Q9C0A0 1308 aa22.17■■□□□ 1.14
GCFC2-208ENST00000472230 FAM177BA6PVY3 158 aa22.17■■□□□ 1.14
GCFC2-208ENST00000472230 CD2BP2O95400 341 aaKnown RBP22.17■■□□□ 1.14
GCFC2-208ENST00000472230 ANTXR1Q9H6X2 564 aa22.17■■□□□ 1.14
GCFC2-208ENST00000472230 GREM2Q9H772 168 aa22.17■■□□□ 1.14
GCFC2-208ENST00000472230 NIP7Q9Y221 180 aaKnown RBP eCLIP22.17■■□□□ 1.14
GCFC2-208ENST00000472230 SEPT12Q8IYM1 358 aa22.16■■□□□ 1.14
GCFC2-208ENST00000472230 ONECUT3O60422 494 aaPredicted RBP22.15■■□□□ 1.14
GCFC2-208ENST00000472230 HSP90B1P14625 803 aaKnown RBP22.15■■□□□ 1.14
GCFC2-208ENST00000472230 KCNQ4P56696 695 aa22.15■■□□□ 1.14
GCFC2-208ENST00000472230 TIMM10P62072 90 aa22.15■■□□□ 1.14
GCFC2-208ENST00000472230 DNAJC2Q99543 621 aaKnown RBP22.15■■□□□ 1.14
GCFC2-208ENST00000472230 RAD50Q92878 1312 aa22.15■■□□□ 1.14
GCFC2-208ENST00000472230 A0A1B0GUL7 405 aa22.15■■□□□ 1.14
GCFC2-208ENST00000472230 SBF2Q86WG5 1849 aa22.15■■□□□ 1.14
GCFC2-208ENST00000472230 LDHAL6AQ6ZMR3 332 aa22.14■■□□□ 1.14
GCFC2-208ENST00000472230 LSG1Q9H089 658 aaKnown RBP22.14■■□□□ 1.14
GCFC2-208ENST00000472230 QTRT2Q9H974 415 aaKnown RBP22.14■■□□□ 1.14
GCFC2-208ENST00000472230 CCNL1Q9UK58 526 aaPredicted RBP22.14■■□□□ 1.14
GCFC2-208ENST00000472230 RC3H1Q5TC82 1133 aaKnown RBP22.14■■□□□ 1.13
GCFC2-208ENST00000472230 HAUS7Q99871 368 aa22.14■■□□□ 1.13
GCFC2-208ENST00000472230 CNNM1Q9NRU3 951 aa22.14■■□□□ 1.13
GCFC2-208ENST00000472230 HSPA4P34932 840 aa22.13■■□□□ 1.13
GCFC2-208ENST00000472230 NMIQ13287 307 aaPredicted RBP22.13■■□□□ 1.13
GCFC2-208ENST00000472230 CLEC4GQ6UXB4 293 aa22.13■■□□□ 1.13
GCFC2-208ENST00000472230 CHMP5Q9NZZ3 219 aa22.13■■□□□ 1.13
GCFC2-208ENST00000472230 NFKBIBQ15653 356 aa22.13■■□□□ 1.13
GCFC2-208ENST00000472230 METTL24Q5JXM2 366 aa22.13■■□□□ 1.13
GCFC2-208ENST00000472230 GORABQ5T7V8 394 aa22.13■■□□□ 1.13
GCFC2-208ENST00000472230 PALD1Q9ULE6 856 aa22.12■■□□□ 1.13
GCFC2-208ENST00000472230 HCLS1P14317 486 aaPredicted RBP22.11■■□□□ 1.13
GCFC2-208ENST00000472230 NEK4P51957 841 aa22.11■■□□□ 1.13
GCFC2-208ENST00000472230 CCDC158Q5M9N0 1113 aa22.11■■□□□ 1.13
GCFC2-208ENST00000472230 EDC3Q96F86 508 aaKnown RBP22.11■■□□□ 1.13
GCFC2-208ENST00000472230 LY75O60449 1722 aa22.11■■□□□ 1.13
GCFC2-208ENST00000472230 RFX7Q2KHR2 1363 aa22.11■■□□□ 1.13
GCFC2-208ENST00000472230 LAMB2P55268 1798 aa22.11■■□□□ 1.13
GCFC2-208ENST00000472230 FAM227BQ96M60 508 aa22.1■■□□□ 1.13
GCFC2-208ENST00000472230 RPS6KA4O75676 772 aa22.1■■□□□ 1.13
GCFC2-208ENST00000472230 NTSR2O95665 410 aa22.1■■□□□ 1.13
GCFC2-208ENST00000472230 IFIT1P09914 478 aaKnown RBP22.1■■□□□ 1.13
GCFC2-208ENST00000472230 RIPOR2Q9Y4F9 1068 aa22.1■■□□□ 1.13
GCFC2-208ENST00000472230 DDX60Q8IY21 1712 aaKnown RBP22.1■■□□□ 1.13
GCFC2-208ENST00000472230 TTC39AQ5SRH9 613 aa22.09■■□□□ 1.13
GCFC2-208ENST00000472230 SCN7AQ01118 1682 aa22.09■■□□□ 1.13
GCFC2-208ENST00000472230 GNPATO15228 680 aa22.09■■□□□ 1.13
GCFC2-208ENST00000472230 NDUFB9Q9Y6M9 179 aa22.09■■□□□ 1.13
GCFC2-208ENST00000472230 RIC1Q4ADV7 1423 aa22.08■■□□□ 1.13
GCFC2-208ENST00000472230 RGL2O15211 777 aa22.08■■□□□ 1.13
GCFC2-208ENST00000472230 ATP2B3Q16720 1220 aa22.08■■□□□ 1.13
GCFC2-208ENST00000472230 CCDC152Q4G0S7 254 aa22.08■■□□□ 1.13
GCFC2-208ENST00000472230 DDX46Q7L014 1031 aaKnown RBP22.08■■□□□ 1.13
GCFC2-208ENST00000472230 IL17RAQ96F46 866 aa22.08■■□□□ 1.13
GCFC2-208ENST00000472230 XAGE2Q96GT9 111 aa22.08■■□□□ 1.13
GCFC2-208ENST00000472230 PAG1Q9NWQ8 432 aa22.08■■□□□ 1.13
GCFC2-208ENST00000472230 CCDC171Q6TFL3 1326 aa22.08■■□□□ 1.12
GCFC2-208ENST00000472230 A0A0D9SFI3 127 aa22.08■■□□□ 1.12
GCFC2-208ENST00000472230 KCNJ4P48050 445 aa22.08■■□□□ 1.12
GCFC2-208ENST00000472230 MCM2P49736 904 aa22.08■■□□□ 1.12
GCFC2-208ENST00000472230 IL27Q8NEV9 243 aa22.08■■□□□ 1.12
GCFC2-208ENST00000472230 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.08■■□□□ 1.12
GCFC2-208ENST00000472230 FOXD4L1Q9NU39 408 aa22.08■■□□□ 1.12
GCFC2-208ENST00000472230 RTCBQ9Y3I0 505 aaKnown RBP22.08■■□□□ 1.12
GCFC2-208ENST00000472230 TAF1LQ8IZX4 1826 aa22.08■■□□□ 1.12
GCFC2-208ENST00000472230 KBTBD3Q8NAB2 608 aa22.07■■□□□ 1.12
GCFC2-208ENST00000472230 GOLIM4O00461 696 aa22.06■■□□□ 1.12
GCFC2-208ENST00000472230 PTH1RQ03431 593 aa22.06■■□□□ 1.12
GCFC2-208ENST00000472230 SPEF2Q9C093 1822 aa22.06■■□□□ 1.12
GCFC2-208ENST00000472230 ZPR1O75312 459 aa22.06■■□□□ 1.12
GCFC2-208ENST00000472230 BCL11BQ9C0K0 894 aaPredicted RBP22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms