RNA–Protein interactions for RNA: ENST00000472170.1

TSPAN1-205, Transcript of tetraspanin 1, humanhuman

TSL 3

Gene TSPAN1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-205ENST00000472170 SF3B3Q15393 1217 aaKnown RBP10.66□□□□□ -0.7
TSPAN1-205ENST00000472170 NIM1KQ8IY84 436 aa10.66□□□□□ -0.7
TSPAN1-205ENST00000472170 DICER1Q9UPY3 1922 aaKnown RBP10.66□□□□□ -0.7
TSPAN1-205ENST00000472170 ARFGEF2Q9Y6D5 1785 aa10.65□□□□□ -0.7
TSPAN1-205ENST00000472170 ABCC4O15439 1325 aa10.65□□□□□ -0.7
TSPAN1-205ENST00000472170 COL11A2P13942 1736 aaPredicted RBP10.65□□□□□ -0.7
TSPAN1-205ENST00000472170 PPIP5K2O43314 1243 aa10.65□□□□□ -0.7
TSPAN1-205ENST00000472170 LMOD1P29536 600 aaPredicted RBP10.65□□□□□ -0.7
TSPAN1-205ENST00000472170 APLP1P51693 650 aa10.65□□□□□ -0.7
TSPAN1-205ENST00000472170 RPS8P62241 208 aaKnown RBP10.65□□□□□ -0.7
TSPAN1-205ENST00000472170 FLIIQ13045 1269 aa10.65□□□□□ -0.7
TSPAN1-205ENST00000472170 EYA3Q99504 573 aa10.65□□□□□ -0.7
TSPAN1-205ENST00000472170 NSFL1CQ9UNZ2 370 aaKnown RBP10.65□□□□□ -0.7
TSPAN1-205ENST00000472170 DDNO94850 711 aaPredicted RBP10.64□□□□□ -0.71
TSPAN1-205ENST00000472170 PNMA8AQ86V59 439 aaPredicted RBP10.64□□□□□ -0.71
TSPAN1-205ENST00000472170 GPC2Q8N158 579 aa10.64□□□□□ -0.71
TSPAN1-205ENST00000472170 DNAAF4Q8WXU2 420 aa10.64□□□□□ -0.71
TSPAN1-205ENST00000472170 ZNF428Q96B54 188 aa10.64□□□□□ -0.71
TSPAN1-205ENST00000472170 CDC5LQ99459 802 aaKnown RBP10.64□□□□□ -0.71
TSPAN1-205ENST00000472170 ANKIB1Q9P2G1 1089 aa10.64□□□□□ -0.71
TSPAN1-205ENST00000472170 CLEC11AQ9Y240 323 aa10.64□□□□□ -0.71
TSPAN1-205ENST00000472170 C6orf229H3BNL8 230 aa10.63□□□□□ -0.71
TSPAN1-205ENST00000472170 TNIP1Q15025 636 aa10.63□□□□□ -0.71
TSPAN1-205ENST00000472170 DIEXFQ68CQ4 756 aaKnown RBP10.63□□□□□ -0.71
TSPAN1-205ENST00000472170 OLFM4Q6UX06 510 aa10.63□□□□□ -0.71
TSPAN1-205ENST00000472170 ANKRD18AQ8IVF6 992 aa10.63□□□□□ -0.71
TSPAN1-205ENST00000472170 LINS1Q8NG48 757 aa10.63□□□□□ -0.71
TSPAN1-205ENST00000472170 ZC3H12CQ9C0D7 883 aaKnown RBP10.63□□□□□ -0.71
TSPAN1-205ENST00000472170 HACL1Q9UJ83 578 aa10.63□□□□□ -0.71
TSPAN1-205ENST00000472170 GJA3Q9Y6H8 435 aa10.63□□□□□ -0.71
TSPAN1-205ENST00000472170 TNRC6CQ9HCJ0 1690 aaKnown RBP10.63□□□□□ -0.71
TSPAN1-205ENST00000472170 CDHR2Q9BYE9 1310 aa10.62□□□□□ -0.71
TSPAN1-205ENST00000472170 FZD9O00144 591 aa10.62□□□□□ -0.71
TSPAN1-205ENST00000472170 PRELPP51888 382 aa10.62□□□□□ -0.71
TSPAN1-205ENST00000472170 WASHC4Q2M389 1173 aa10.62□□□□□ -0.71
TSPAN1-205ENST00000472170 C3orf67Q6ZVT6 689 aa10.62□□□□□ -0.71
TSPAN1-205ENST00000472170 C9orf78Q9NZ63 289 aaPredicted RBP10.62□□□□□ -0.71
TSPAN1-205ENST00000472170 ZNRF3Q9ULT6 936 aa10.62□□□□□ -0.71
TSPAN1-205ENST00000472170 NEURL1BA8MQ27 555 aa10.61□□□□□ -0.71
TSPAN1-205ENST00000472170 IGHMBP2P38935 993 aaKnown RBP10.61□□□□□ -0.71
TSPAN1-205ENST00000472170 EAPPQ56P03 285 aaPredicted RBP10.61□□□□□ -0.71
TSPAN1-205ENST00000472170 G2E3Q7L622 706 aa10.61□□□□□ -0.71
TSPAN1-205ENST00000472170 UBE3BQ7Z3V4 1068 aa10.61□□□□□ -0.71
TSPAN1-205ENST00000472170 BCL2L13Q9BXK5 485 aa10.61□□□□□ -0.71
TSPAN1-205ENST00000472170 RTFDC1Q9BY42 306 aaPredicted RBP10.61□□□□□ -0.71
TSPAN1-205ENST00000472170 H7C1W4 665 aa10.6□□□□□ -0.71
TSPAN1-205ENST00000472170 GCKRQ14397 625 aa10.6□□□□□ -0.71
TSPAN1-205ENST00000472170 AOC3Q16853 763 aa10.6□□□□□ -0.71
TSPAN1-205ENST00000472170 CWF19L2Q2TBE0 894 aaKnown RBP10.6□□□□□ -0.71
TSPAN1-205ENST00000472170 CHADLQ6NUI6 762 aa10.6□□□□□ -0.71
TSPAN1-205ENST00000472170 SLC4A10Q6U841 1118 aa10.6□□□□□ -0.71
TSPAN1-205ENST00000472170 CELF1Q92879 486 aaKnown RBP10.6□□□□□ -0.71
TSPAN1-205ENST00000472170 L3MBTL3Q96JM7 780 aaPredicted RBP10.6□□□□□ -0.71
TSPAN1-205ENST00000472170 MPHOSPH8Q99549 860 aa10.6□□□□□ -0.71
TSPAN1-205ENST00000472170 HDAC5Q9UQL6 1122 aa10.6□□□□□ -0.71
TSPAN1-205ENST00000472170 TIAM2Q8IVF5 1701 aa10.6□□□□□ -0.71
TSPAN1-205ENST00000472170 IGKV5-2P06315 115 aa10.59□□□□□ -0.71
TSPAN1-205ENST00000472170 CT47B1P0C2W7 299 aaPredicted RBP10.59□□□□□ -0.71
TSPAN1-205ENST00000472170 EPHX2P34913 555 aa10.59□□□□□ -0.71
TSPAN1-205ENST00000472170 CTSWP56202 376 aa10.59□□□□□ -0.71
TSPAN1-205ENST00000472170 SLFN5Q08AF3 891 aa10.59□□□□□ -0.71
TSPAN1-205ENST00000472170 KIAA2012Q0VF49 1180 aa10.59□□□□□ -0.71
TSPAN1-205ENST00000472170 TAF7LQ5H9L4 462 aa10.59□□□□□ -0.71
TSPAN1-205ENST00000472170 CIAPIN1Q6FI81 312 aa10.59□□□□□ -0.71
TSPAN1-205ENST00000472170 LDHDQ86WU2 507 aa10.59□□□□□ -0.71
TSPAN1-205ENST00000472170 JARID2Q92833 1246 aaPredicted RBP10.59□□□□□ -0.71
TSPAN1-205ENST00000472170 CCDC85AQ96PX6 553 aaPredicted RBP10.59□□□□□ -0.71
TSPAN1-205ENST00000472170 SRCIN1Q9C0H9 1055 aa10.59□□□□□ -0.71
TSPAN1-205ENST00000472170 GGA1Q9UJY5 639 aa10.59□□□□□ -0.71
TSPAN1-205ENST00000472170 CHMP3Q9Y3E7 222 aa10.59□□□□□ -0.71
TSPAN1-205ENST00000472170 SCN4AP35499 1836 aa10.58□□□□□ -0.72
TSPAN1-205ENST00000472170 ANKRD18BA2A2Z9 1011 aa10.58□□□□□ -0.72
TSPAN1-205ENST00000472170 H7C1D1 291 aa10.58□□□□□ -0.72
TSPAN1-205ENST00000472170 RIMBP2O15034 1052 aa10.58□□□□□ -0.72
TSPAN1-205ENST00000472170 ALDH1L1O75891 902 aa10.58□□□□□ -0.72
TSPAN1-205ENST00000472170 ATP2B4P23634 1241 aa10.58□□□□□ -0.72
TSPAN1-205ENST00000472170 IFIT5Q13325 482 aaKnown RBP10.58□□□□□ -0.72
TSPAN1-205ENST00000472170 TTLL11Q8NHH1 800 aa10.58□□□□□ -0.72
TSPAN1-205ENST00000472170 ANKRD2Q9GZV1 360 aa10.58□□□□□ -0.72
TSPAN1-205ENST00000472170 TAF1DQ9H5J8 278 aaPredicted RBP10.58□□□□□ -0.72
TSPAN1-205ENST00000472170 SPINK5Q9NQ38 1064 aaPredicted RBP10.58□□□□□ -0.72
TSPAN1-205ENST00000472170 BSDC1Q9NW68 430 aaPredicted RBP10.58□□□□□ -0.72
TSPAN1-205ENST00000472170 WDR90Q96KV7 1748 aa10.58□□□□□ -0.72
TSPAN1-205ENST00000472170 PTPRCP08575 1304 aa10.58□□□□□ -0.72
TSPAN1-205ENST00000472170 KCNJ4P48050 445 aa10.57□□□□□ -0.72
TSPAN1-205ENST00000472170 GPSM2P81274 684 aa10.57□□□□□ -0.72
TSPAN1-205ENST00000472170 CCDC57Q2TAC2 916 aa10.57□□□□□ -0.72
TSPAN1-205ENST00000472170 ALDH1L2Q3SY69 923 aa10.57□□□□□ -0.72
TSPAN1-205ENST00000472170 USP50Q70EL3 339 aaPredicted RBP10.57□□□□□ -0.72
TSPAN1-205ENST00000472170 DNAJC5GQ8N7S2 189 aa10.57□□□□□ -0.72
TSPAN1-205ENST00000472170 PLA2G12BQ9BX93 195 aa10.57□□□□□ -0.72
TSPAN1-205ENST00000472170 SEC31BQ9NQW1 1179 aa10.57□□□□□ -0.72
TSPAN1-205ENST00000472170 PODXL2Q9NZ53 605 aa10.57□□□□□ -0.72
TSPAN1-205ENST00000472170 LAMB2P55268 1798 aa10.57□□□□□ -0.72
TSPAN1-205ENST00000472170 XDHP47989 1333 aa10.57□□□□□ -0.72
TSPAN1-205ENST00000472170 ZNF521Q96K83 1311 aa10.57□□□□□ -0.72
TSPAN1-205ENST00000472170 ZNF541Q9H0D2 1346 aa10.57□□□□□ -0.72
TSPAN1-205ENST00000472170 POTECB2RU33 542 aa10.56□□□□□ -0.72
TSPAN1-205ENST00000472170 F6X3S4 739 aa10.56□□□□□ -0.72
TSPAN1-205ENST00000472170 CAPN15O75808 1086 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms