RNA–Protein interactions for RNA: ENST00000471935.1

TRBV11-2-201, Transcript of T cell receptor beta variable 11-2, humanhuman

TSL 1 (best) BASIC

Gene TRBV11-2, Length 408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-2-201ENST00000471935 CHADLQ6NUI6 762 aa16.24■□□□□ 0.19
TRBV11-2-201ENST00000471935 DDX46Q7L014 1031 aaKnown RBP16.24■□□□□ 0.19
TRBV11-2-201ENST00000471935 GPC2Q8N158 579 aa16.24■□□□□ 0.19
TRBV11-2-201ENST00000471935 LARGE2Q8N3Y3 721 aa16.24■□□□□ 0.19
TRBV11-2-201ENST00000471935 FANCIQ9NVI1 1328 aa16.23■□□□□ 0.19
TRBV11-2-201ENST00000471935 IGKV5-2P06315 115 aa16.23■□□□□ 0.19
TRBV11-2-201ENST00000471935 ZBTB38Q8NAP3 1195 aaPredicted RBP16.23■□□□□ 0.19
TRBV11-2-201ENST00000471935 JDP2Q8WYK2 163 aa16.23■□□□□ 0.19
TRBV11-2-201ENST00000471935 KLRG1Q96E93 195 aa16.23■□□□□ 0.19
TRBV11-2-201ENST00000471935 METTL22Q9BUU2 404 aaPredicted RBP16.23■□□□□ 0.19
TRBV11-2-201ENST00000471935 CACNA1FO60840 1977 aa16.23■□□□□ 0.19
TRBV11-2-201ENST00000471935 MYH3P11055 1940 aa16.22■□□□□ 0.19
TRBV11-2-201ENST00000471935 IQCA1LA6NCM1 817 aa16.22■□□□□ 0.19
TRBV11-2-201ENST00000471935 PPIP5K2O43314 1243 aa16.22■□□□□ 0.19
TRBV11-2-201ENST00000471935 SCNN1DP51172 638 aa16.22■□□□□ 0.19
TRBV11-2-201ENST00000471935 TWISTNBQ3B726 338 aaPredicted RBP16.22■□□□□ 0.19
TRBV11-2-201ENST00000471935 SEC31BQ9NQW1 1179 aa16.22■□□□□ 0.19
TRBV11-2-201ENST00000471935 HACL1Q9UJ83 578 aa16.22■□□□□ 0.19
TRBV11-2-201ENST00000471935 MAP3K2Q9Y2U5 619 aa16.22■□□□□ 0.19
TRBV11-2-201ENST00000471935 GJA3Q9Y6H8 435 aa16.22■□□□□ 0.19
TRBV11-2-201ENST00000471935 PASKQ96RG2 1323 aa16.21■□□□□ 0.19
TRBV11-2-201ENST00000471935 PI4KAP2A4QPH2 592 aa16.21■□□□□ 0.19
TRBV11-2-201ENST00000471935 ITGBL1O95965 494 aaPredicted RBP16.21■□□□□ 0.19
TRBV11-2-201ENST00000471935 PCCAP05165 728 aaPredicted RBP16.21■□□□□ 0.19
TRBV11-2-201ENST00000471935 EPHX2P34913 555 aa16.21■□□□□ 0.19
TRBV11-2-201ENST00000471935 EPS15P42566 896 aa16.21■□□□□ 0.19
TRBV11-2-201ENST00000471935 DPP8Q6V1X1 898 aaPredicted RBP16.21■□□□□ 0.19
TRBV11-2-201ENST00000471935 LDHDQ86WU2 507 aa16.21■□□□□ 0.19
TRBV11-2-201ENST00000471935 MPNDQ8N594 471 aa16.21■□□□□ 0.19
TRBV11-2-201ENST00000471935 PI4KAP1Q8N8J0 262 aa16.21■□□□□ 0.19
TRBV11-2-201ENST00000471935 JMYQ8N9B5 988 aa16.21■□□□□ 0.19
TRBV11-2-201ENST00000471935 CCDC191Q8NCU4 936 aa16.21■□□□□ 0.19
TRBV11-2-201ENST00000471935 SPEF2Q9C093 1822 aa16.2■□□□□ 0.18
TRBV11-2-201ENST00000471935 YDJCA8MPS7 323 aa16.2■□□□□ 0.18
TRBV11-2-201ENST00000471935 CXCL9Q07325 125 aa16.2■□□□□ 0.18
TRBV11-2-201ENST00000471935 KIAA2012Q0VF49 1180 aa16.2■□□□□ 0.18
TRBV11-2-201ENST00000471935 KSR2Q6VAB6 950 aa16.2■□□□□ 0.18
TRBV11-2-201ENST00000471935 SCN9AQ15858 1988 aa16.2■□□□□ 0.18
TRBV11-2-201ENST00000471935 VAMP4O75379 141 aa16.19■□□□□ 0.18
TRBV11-2-201ENST00000471935 SLC4A2P04920 1241 aa16.19■□□□□ 0.18
TRBV11-2-201ENST00000471935 EIF6P56537 245 aaKnown RBP16.19■□□□□ 0.18
TRBV11-2-201ENST00000471935 CWF19L2Q2TBE0 894 aaKnown RBP16.19■□□□□ 0.18
TRBV11-2-201ENST00000471935 EAPPQ56P03 285 aaPredicted RBP16.19■□□□□ 0.18
TRBV11-2-201ENST00000471935 WDR63Q8IWG1 891 aa16.19■□□□□ 0.18
TRBV11-2-201ENST00000471935 NIM1KQ8IY84 436 aa16.19■□□□□ 0.18
TRBV11-2-201ENST00000471935 FAM9BQ8IZU0 186 aa16.19■□□□□ 0.18
TRBV11-2-201ENST00000471935 CWC25Q9NXE8 425 aaPredicted RBP16.19■□□□□ 0.18
TRBV11-2-201ENST00000471935 POLLQ9UGP5 575 aa16.19■□□□□ 0.18
TRBV11-2-201ENST00000471935 GPSM2P81274 684 aa16.18■□□□□ 0.18
TRBV11-2-201ENST00000471935 EXOSC9Q06265 439 aaKnown RBP16.18■□□□□ 0.18
TRBV11-2-201ENST00000471935 VPS33BQ9H267 617 aa16.18■□□□□ 0.18
TRBV11-2-201ENST00000471935 ZNRF3Q9ULT6 936 aa16.18■□□□□ 0.18
TRBV11-2-201ENST00000471935 RPS8P62241 208 aaKnown RBP16.17■□□□□ 0.18
TRBV11-2-201ENST00000471935 FMR1Q06787 632 aaKnown RBP eCLIP16.17■□□□□ 0.18
TRBV11-2-201ENST00000471935 MAP1SQ66K74 1059 aaPredicted RBP16.17■□□□□ 0.18
TRBV11-2-201ENST00000471935 TMC4Q7Z404 712 aa16.17■□□□□ 0.18
TRBV11-2-201ENST00000471935 SUPT20HQ8NEM7 779 aa16.17■□□□□ 0.18
TRBV11-2-201ENST00000471935 GPR101Q96P66 508 aaPredicted RBP16.17■□□□□ 0.18
TRBV11-2-201ENST00000471935 CCDC85AQ96PX6 553 aaPredicted RBP16.17■□□□□ 0.18
TRBV11-2-201ENST00000471935 ZNF521Q96K83 1311 aa16.17■□□□□ 0.18
TRBV11-2-201ENST00000471935 CDHR2Q9BYE9 1310 aa16.17■□□□□ 0.18
TRBV11-2-201ENST00000471935 SHTN1A0MZ66 631 aa16.16■□□□□ 0.18
TRBV11-2-201ENST00000471935 NEURL1BA8MQ27 555 aa16.16■□□□□ 0.18
TRBV11-2-201ENST00000471935 PDE8AO60658 829 aa16.16■□□□□ 0.18
TRBV11-2-201ENST00000471935 RAD17O75943 681 aa16.16■□□□□ 0.18
TRBV11-2-201ENST00000471935 DDX58O95786 925 aaKnown RBP16.16■□□□□ 0.18
TRBV11-2-201ENST00000471935 STK31Q9BXU1 1019 aa16.16■□□□□ 0.18
TRBV11-2-201ENST00000471935 NSFL1CQ9UNZ2 370 aaKnown RBP16.16■□□□□ 0.18
TRBV11-2-201ENST00000471935 WTIPA6NIX2 430 aaPredicted RBP16.15■□□□□ 0.18
TRBV11-2-201ENST00000471935 FLIIQ13045 1269 aa16.15■□□□□ 0.18
TRBV11-2-201ENST00000471935 TMX4Q9H1E5 349 aaPredicted RBP16.15■□□□□ 0.18
TRBV11-2-201ENST00000471935 KCNQ5Q9NR82 932 aa16.15■□□□□ 0.18
TRBV11-2-201ENST00000471935 CREBZFQ9NS37 354 aa16.15■□□□□ 0.18
TRBV11-2-201ENST00000471935 GPRC5DQ9NZD1 345 aa16.15■□□□□ 0.18
TRBV11-2-201ENST00000471935 H7C1W4 665 aa16.14■□□□□ 0.17
TRBV11-2-201ENST00000471935 GMPSP49915 693 aaPredicted RBP16.14■□□□□ 0.17
TRBV11-2-201ENST00000471935 CASP7P55210 303 aa16.14■□□□□ 0.17
TRBV11-2-201ENST00000471935 PNMA8AQ86V59 439 aaPredicted RBP16.14■□□□□ 0.17
TRBV11-2-201ENST00000471935 CNTROBQ8N137 903 aa16.14■□□□□ 0.17
TRBV11-2-201ENST00000471935 TBC1D16Q8TBP0 767 aa16.14■□□□□ 0.17
TRBV11-2-201ENST00000471935 CHMP4AQ9BY43 222 aa16.14■□□□□ 0.17
TRBV11-2-201ENST00000471935 CLEC11AQ9Y240 323 aa16.14■□□□□ 0.17
TRBV11-2-201ENST00000471935 TRPM7Q96QT4 1865 aa16.14■□□□□ 0.17
TRBV11-2-201ENST00000471935 ZNF646O15015 1829 aaPredicted RBP16.13■□□□□ 0.17
TRBV11-2-201ENST00000471935 PSME4Q14997 1843 aa16.13■□□□□ 0.17
TRBV11-2-201ENST00000471935 RIMBP2O15034 1052 aa16.13■□□□□ 0.17
TRBV11-2-201ENST00000471935 CTSWP56202 376 aa16.13■□□□□ 0.17
TRBV11-2-201ENST00000471935 CIAPIN1Q6FI81 312 aa16.13■□□□□ 0.17
TRBV11-2-201ENST00000471935 TTLL11Q8NHH1 800 aa16.13■□□□□ 0.17
TRBV11-2-201ENST00000471935 DBNDD1Q9H9R9 158 aa16.13■□□□□ 0.17
TRBV11-2-201ENST00000471935 RTL9Q8NET4 1388 aa16.13■□□□□ 0.17
TRBV11-2-201ENST00000471935 HIRAP54198 1017 aaPredicted RBP16.12■□□□□ 0.17
TRBV11-2-201ENST00000471935 WASHC4Q2M389 1173 aa16.12■□□□□ 0.17
TRBV11-2-201ENST00000471935 CCDC152Q4G0S7 254 aa16.12■□□□□ 0.17
TRBV11-2-201ENST00000471935 UBE3BQ7Z3V4 1068 aa16.12■□□□□ 0.17
TRBV11-2-201ENST00000471935 PODXL2Q9NZ53 605 aa16.12■□□□□ 0.17
TRBV11-2-201ENST00000471935 MKRN1Q9UHC7 482 aaKnown RBP16.12■□□□□ 0.17
TRBV11-2-201ENST00000471935 POLR2AP24928 1970 aaKnown RBP16.12■□□□□ 0.17
TRBV11-2-201ENST00000471935 F6X3S4 739 aa16.11■□□□□ 0.17
TRBV11-2-201ENST00000471935 C6orf229H3BNL8 230 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms