RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 MAP4K1Q92918 833 aa20.85■□□□□ 0.93
RRP1-202ENST00000471909 ZNF594Q96JF6 807 aaPredicted RBP20.85■□□□□ 0.93
RRP1-202ENST00000471909 NDUFB9Q9Y6M9 179 aa20.85■□□□□ 0.93
RRP1-202ENST00000471909 CYP19A1P11511 503 aaPredicted RBP20.85■□□□□ 0.93
RRP1-202ENST00000471909 LRRC24Q50LG9 513 aa20.85■□□□□ 0.93
RRP1-202ENST00000471909 CAVIN1Q6NZI2 390 aaKnown RBP20.85■□□□□ 0.93
RRP1-202ENST00000471909 LRP6O75581 1613 aa20.85■□□□□ 0.93
RRP1-202ENST00000471909 IL15P40933 162 aaPredicted RBP20.84■□□□□ 0.93
RRP1-202ENST00000471909 ADCK5Q3MIX3 580 aa20.84■□□□□ 0.93
RRP1-202ENST00000471909 RBM8AQ9Y5S9 174 aaKnown RBP20.84■□□□□ 0.93
RRP1-202ENST00000471909 MED23Q9ULK4 1368 aa20.84■□□□□ 0.93
RRP1-202ENST00000471909 MAP3K15Q6ZN16 1313 aa20.84■□□□□ 0.93
RRP1-202ENST00000471909 EYA2O00167 538 aa20.84■□□□□ 0.93
RRP1-202ENST00000471909 CPA1P15085 419 aa20.84■□□□□ 0.93
RRP1-202ENST00000471909 CASTP20810 708 aaKnown RBP20.84■□□□□ 0.93
RRP1-202ENST00000471909 AK2P54819 239 aa20.84■□□□□ 0.93
RRP1-202ENST00000471909 PKNOX2Q96KN3 472 aa20.84■□□□□ 0.93
RRP1-202ENST00000471909 PRIM1P49642 420 aaKnown RBP20.83■□□□□ 0.93
RRP1-202ENST00000471909 ZSCAN23Q3MJ62 389 aa20.83■□□□□ 0.93
RRP1-202ENST00000471909 HAUS7Q99871 368 aa20.83■□□□□ 0.93
RRP1-202ENST00000471909 OFD1O75665 1012 aa20.83■□□□□ 0.92
RRP1-202ENST00000471909 HLFQ16534 295 aa20.83■□□□□ 0.92
RRP1-202ENST00000471909 GIGYF2Q6Y7W6 1299 aaKnown RBP20.83■□□□□ 0.92
RRP1-202ENST00000471909 FAM89AQ96GI7 184 aa20.83■□□□□ 0.92
RRP1-202ENST00000471909 GPR108Q9NPR9 543 aa20.83■□□□□ 0.92
RRP1-202ENST00000471909 PCCAP05165 728 aaPredicted RBP20.82■□□□□ 0.92
RRP1-202ENST00000471909 TIMM10P62072 90 aa20.82■□□□□ 0.92
RRP1-202ENST00000471909 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.82■□□□□ 0.92
RRP1-202ENST00000471909 RUFY3Q7L099 469 aa20.82■□□□□ 0.92
RRP1-202ENST00000471909 ZNF589Q86UQ0 364 aaPredicted RBP20.82■□□□□ 0.92
RRP1-202ENST00000471909 DNAJC2Q99543 621 aaKnown RBP20.82■□□□□ 0.92
RRP1-202ENST00000471909 LMBRD1Q9NUN5 540 aa20.82■□□□□ 0.92
RRP1-202ENST00000471909 CREB3L3Q68CJ9 461 aa20.82■□□□□ 0.92
RRP1-202ENST00000471909 JAKMIP1Q96N16 626 aaKnown RBP20.82■□□□□ 0.92
RRP1-202ENST00000471909 NEUROD6Q96NK8 337 aa20.82■□□□□ 0.92
RRP1-202ENST00000471909 PUS3Q9BZE2 481 aaKnown RBP20.82■□□□□ 0.92
RRP1-202ENST00000471909 CCDC9Q9Y3X0 531 aaKnown RBP20.82■□□□□ 0.92
RRP1-202ENST00000471909 SPATA31A1Q5TZJ5 1347 aa20.82■□□□□ 0.92
RRP1-202ENST00000471909 CIAO1O76071 339 aa20.81■□□□□ 0.92
RRP1-202ENST00000471909 TM6SF1Q9BZW5 370 aa20.81■□□□□ 0.92
RRP1-202ENST00000471909 ZSWIM6Q9HCJ5 1215 aa20.81■□□□□ 0.92
RRP1-202ENST00000471909 ZBTB1Q9Y2K1 713 aa20.81■□□□□ 0.92
RRP1-202ENST00000471909 KCNJ4P48050 445 aa20.81■□□□□ 0.92
RRP1-202ENST00000471909 ZBTB38Q8NAP3 1195 aaPredicted RBP20.81■□□□□ 0.92
RRP1-202ENST00000471909 LARP6Q9BRS8 491 aaKnown RBP20.81■□□□□ 0.92
RRP1-202ENST00000471909 HS1BP3Q53T59 392 aa20.8■□□□□ 0.92
RRP1-202ENST00000471909 BRD1O95696 1058 aa20.8■□□□□ 0.92
RRP1-202ENST00000471909 CHGBP05060 677 aa20.8■□□□□ 0.92
RRP1-202ENST00000471909 ZKSCAN1P17029 563 aaPredicted RBP20.8■□□□□ 0.92
RRP1-202ENST00000471909 CCDC57Q2TAC2 916 aa20.8■□□□□ 0.92
RRP1-202ENST00000471909 ZMYND15Q9H091 742 aa20.8■□□□□ 0.92
RRP1-202ENST00000471909 LIMCH1Q9UPQ0 1083 aa20.8■□□□□ 0.92
RRP1-202ENST00000471909 SLC27A2O14975 620 aa20.79■□□□□ 0.92
RRP1-202ENST00000471909 CDCA7Q9BWT1 371 aaPredicted RBP20.79■□□□□ 0.92
RRP1-202ENST00000471909 PLA2G12BQ9BX93 195 aa20.79■□□□□ 0.92
RRP1-202ENST00000471909 JCADQ9P266 1359 aa20.79■□□□□ 0.92
RRP1-202ENST00000471909 GPTP24298 496 aa20.79■□□□□ 0.92
RRP1-202ENST00000471909 FOXD4L5Q5VV16 416 aaPredicted RBP20.79■□□□□ 0.92
RRP1-202ENST00000471909 DDX46Q7L014 1031 aaKnown RBP20.79■□□□□ 0.92
RRP1-202ENST00000471909 SYNE4Q8N205 404 aa20.79■□□□□ 0.92
RRP1-202ENST00000471909 FOXD4L4Q8WXT5 416 aaPredicted RBP20.79■□□□□ 0.92
RRP1-202ENST00000471909 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.79■□□□□ 0.92
RRP1-202ENST00000471909 RFX7Q2KHR2 1363 aa20.78■□□□□ 0.92
RRP1-202ENST00000471909 TAF5LO75529 589 aa20.78■□□□□ 0.92
RRP1-202ENST00000471909 CSF1RP07333 972 aa20.78■□□□□ 0.92
RRP1-202ENST00000471909 VPS53Q5VIR6 699 aa20.78■□□□□ 0.92
RRP1-202ENST00000471909 NLRP10Q86W26 655 aa20.78■□□□□ 0.92
RRP1-202ENST00000471909 CCDC85AQ96PX6 553 aaPredicted RBP20.78■□□□□ 0.92
RRP1-202ENST00000471909 PDCL3Q9H2J4 239 aa20.78■□□□□ 0.92
RRP1-202ENST00000471909 CYP46A1Q9Y6A2 500 aa20.78■□□□□ 0.92
RRP1-202ENST00000471909 WNK3Q9BYP7 1800 aa20.78■□□□□ 0.92
RRP1-202ENST00000471909 DDB1Q16531 1140 aa20.78■□□□□ 0.92
RRP1-202ENST00000471909 CHAMP1Q96JM3 812 aa20.78■□□□□ 0.92
RRP1-202ENST00000471909 PDRG1Q9NUG6 133 aa20.78■□□□□ 0.92
RRP1-202ENST00000471909 THRAP3Q9Y2W1 955 aaKnown RBP20.78■□□□□ 0.92
RRP1-202ENST00000471909 ZNF609O15014 1411 aa20.78■□□□□ 0.92
RRP1-202ENST00000471909 KAT6BQ8WYB5 2073 aa20.78■□□□□ 0.92
RRP1-202ENST00000471909 A0A1B0GUL7 405 aa20.77■□□□□ 0.92
RRP1-202ENST00000471909 RBSNQ9H1K0 784 aa20.77■□□□□ 0.92
RRP1-202ENST00000471909 KBTBD3Q8NAB2 608 aa20.77■□□□□ 0.92
RRP1-202ENST00000471909 RPAP1Q9BWH6 1393 aaPredicted RBP20.77■□□□□ 0.91
RRP1-202ENST00000471909 COL9A3Q14050 684 aaPredicted RBP20.76■□□□□ 0.91
RRP1-202ENST00000471909 TAF6LQ9Y6J9 622 aa20.76■□□□□ 0.91
RRP1-202ENST00000471909 PHLPP1O60346 1717 aa20.76■□□□□ 0.91
RRP1-202ENST00000471909 NUTM2BA6NNL0 878 aaPredicted RBP20.76■□□□□ 0.91
RRP1-202ENST00000471909 NUTM2EB1AL46 878 aaPredicted RBP20.76■□□□□ 0.91
RRP1-202ENST00000471909 PRPF40AO75400 957 aaKnown RBP20.76■□□□□ 0.91
RRP1-202ENST00000471909 LARGE1O95461 756 aa20.76■□□□□ 0.91
RRP1-202ENST00000471909 TERF1P54274 439 aa20.76■□□□□ 0.91
RRP1-202ENST00000471909 HSP90AB3PQ58FF7 597 aa20.76■□□□□ 0.91
RRP1-202ENST00000471909 NUTM2AQ8IVF1 878 aaPredicted RBP20.76■□□□□ 0.91
RRP1-202ENST00000471909 SEC62Q99442 399 aaKnown RBP20.76■□□□□ 0.91
RRP1-202ENST00000471909 CEP126Q9P2H0 1117 aa20.76■□□□□ 0.91
RRP1-202ENST00000471909 CDHR2Q9BYE9 1310 aa20.75■□□□□ 0.91
RRP1-202ENST00000471909 NRAPQ86VF7 1730 aa20.75■□□□□ 0.91
RRP1-202ENST00000471909 GOLIM4O00461 696 aa20.75■□□□□ 0.91
RRP1-202ENST00000471909 RNF20Q5VTR2 975 aa20.75■□□□□ 0.91
RRP1-202ENST00000471909 PDLIM2Q96JY6 352 aa20.75■□□□□ 0.91
RRP1-202ENST00000471909 PAG1Q9NWQ8 432 aa20.75■□□□□ 0.91
RRP1-202ENST00000471909 FBXO3Q9UK99 471 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms