RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 TNFRSF25Q93038 417 aa9.55□□□□□ -0.88
HDAC9-221ENST00000471887 SOWAHDA6NJG2 315 aa9.54□□□□□ -0.88
HDAC9-221ENST00000471887 PDGFAP04085 211 aa9.54□□□□□ -0.88
HDAC9-221ENST00000471887 TARSP26639 723 aaKnown RBP9.54□□□□□ -0.88
HDAC9-221ENST00000471887 C1orf229Q6ZS94 237 aaPredicted RBP9.54□□□□□ -0.88
HDAC9-221ENST00000471887 TTC16Q8NEE8 873 aa9.54□□□□□ -0.88
HDAC9-221ENST00000471887 ELOA3CA0A087WX78 387 aaPredicted RBP9.53□□□□□ -0.88
HDAC9-221ENST00000471887 ELOA3DA6NLF2 546 aaPredicted RBP9.53□□□□□ -0.88
HDAC9-221ENST00000471887 MAP3K6O95382 1288 aa9.53□□□□□ -0.88
HDAC9-221ENST00000471887 ELOA3BQ3SY89 546 aa9.53□□□□□ -0.88
HDAC9-221ENST00000471887 NLRP13Q86W25 1043 aa9.53□□□□□ -0.88
HDAC9-221ENST00000471887 ELOA3Q8NG57 546 aa9.53□□□□□ -0.88
HDAC9-221ENST00000471887 UBE2OQ9C0C9 1292 aaKnown RBP9.53□□□□□ -0.88
HDAC9-221ENST00000471887 ZFATQ9P243 1243 aa9.53□□□□□ -0.88
HDAC9-221ENST00000471887 POLIQ9UNA4 740 aa9.53□□□□□ -0.88
HDAC9-221ENST00000471887 ADARB2-AS1A8MUL3 147 aa9.52□□□□□ -0.89
HDAC9-221ENST00000471887 FZD6O60353 706 aa9.52□□□□□ -0.89
HDAC9-221ENST00000471887 ARHGEF15O94989 841 aa9.52□□□□□ -0.89
HDAC9-221ENST00000471887 ALAS2P22557 587 aa9.52□□□□□ -0.89
HDAC9-221ENST00000471887 USP5P45974 858 aa9.52□□□□□ -0.89
HDAC9-221ENST00000471887 ECM1Q16610 540 aa9.52□□□□□ -0.89
HDAC9-221ENST00000471887 NEDD1Q8NHV4 660 aa9.52□□□□□ -0.89
HDAC9-221ENST00000471887 IGFLR1Q9H665 355 aa9.52□□□□□ -0.89
HDAC9-221ENST00000471887 STK17AQ9UEE5 414 aa9.52□□□□□ -0.89
HDAC9-221ENST00000471887 AMPD1P23109 780 aa9.51□□□□□ -0.89
HDAC9-221ENST00000471887 ARHGAP4P98171 946 aa9.51□□□□□ -0.89
HDAC9-221ENST00000471887 TBC1D8BQ0IIM8 1120 aa9.51□□□□□ -0.89
HDAC9-221ENST00000471887 PDE12Q6L8Q7 609 aaKnown RBP9.51□□□□□ -0.89
HDAC9-221ENST00000471887 CCDC87Q9NVE4 849 aa9.51□□□□□ -0.89
HDAC9-221ENST00000471887 BIN2Q9UBW5 565 aaPredicted RBP9.51□□□□□ -0.89
HDAC9-221ENST00000471887 BRPF3Q9ULD4 1205 aa9.51□□□□□ -0.89
HDAC9-221ENST00000471887 SHISA8B8ZZ34 492 aa9.5□□□□□ -0.89
HDAC9-221ENST00000471887 ADH7P40394 386 aa9.5□□□□□ -0.89
HDAC9-221ENST00000471887 PCSK7Q16549 785 aa9.5□□□□□ -0.89
HDAC9-221ENST00000471887 C8orf34Q49A92 452 aa9.5□□□□□ -0.89
HDAC9-221ENST00000471887 DHX32Q7L7V1 743 aaKnown RBP9.5□□□□□ -0.89
HDAC9-221ENST00000471887 MDFIQ99750 246 aa9.5□□□□□ -0.89
HDAC9-221ENST00000471887 NDUFB5O43674 189 aa9.49□□□□□ -0.89
HDAC9-221ENST00000471887 EHHADHQ08426 723 aa9.49□□□□□ -0.89
HDAC9-221ENST00000471887 ZNF438Q7Z4V0 828 aa9.49□□□□□ -0.89
HDAC9-221ENST00000471887 TLR7Q9NYK1 1049 aaKnown RBP9.49□□□□□ -0.89
HDAC9-221ENST00000471887 MMP20O60882 483 aa9.48□□□□□ -0.89
HDAC9-221ENST00000471887 PSAPP07602 524 aa9.48□□□□□ -0.89
HDAC9-221ENST00000471887 TTC39BQ5VTQ0 682 aaPredicted RBP9.48□□□□□ -0.89
HDAC9-221ENST00000471887 BTBD6Q96KE9 485 aa9.48□□□□□ -0.89
HDAC9-221ENST00000471887 GGNBP2Q9H3C7 697 aa9.48□□□□□ -0.89
HDAC9-221ENST00000471887 ELP3Q9H9T3 547 aa9.48□□□□□ -0.89
HDAC9-221ENST00000471887 DNAJB12Q9NXW2 375 aaKnown RBP9.48□□□□□ -0.89
HDAC9-221ENST00000471887 ADAMTS8Q9UP79 889 aa9.48□□□□□ -0.89
HDAC9-221ENST00000471887 PLAURQ03405 335 aa9.47□□□□□ -0.89
HDAC9-221ENST00000471887 XKR5Q6UX68 686 aa9.47□□□□□ -0.89
HDAC9-221ENST00000471887 CHSY3Q70JA7 882 aa9.47□□□□□ -0.89
HDAC9-221ENST00000471887 GJD3Q8N144 294 aa9.47□□□□□ -0.89
HDAC9-221ENST00000471887 TRPM4Q8TD43 1214 aa9.47□□□□□ -0.89
HDAC9-221ENST00000471887 ABI2Q9NYB9 513 aaPredicted RBP9.47□□□□□ -0.89
HDAC9-221ENST00000471887 SOX18P35713 384 aa9.46□□□□□ -0.9
HDAC9-221ENST00000471887 NRLP54845 237 aa9.46□□□□□ -0.9
HDAC9-221ENST00000471887 GPLD1P80108 840 aa9.46□□□□□ -0.9
HDAC9-221ENST00000471887 KANK3Q6NY19 840 aa9.46□□□□□ -0.9
HDAC9-221ENST00000471887 RRAGCQ9HB90 399 aa9.46□□□□□ -0.9
HDAC9-221ENST00000471887 TMEM63CQ9P1W3 806 aa9.46□□□□□ -0.9
HDAC9-221ENST00000471887 SLC6A14Q9UN76 642 aa9.46□□□□□ -0.9
HDAC9-221ENST00000471887 A6NHS1 94 aa9.45□□□□□ -0.9
HDAC9-221ENST00000471887 MARSP56192 900 aaKnown RBP9.45□□□□□ -0.9
HDAC9-221ENST00000471887 OR13H1Q8NG92 308 aa9.45□□□□□ -0.9
HDAC9-221ENST00000471887 CITED4Q96RK1 184 aa9.45□□□□□ -0.9
HDAC9-221ENST00000471887 PDE3BQ13370 1112 aa9.44□□□□□ -0.9
HDAC9-221ENST00000471887 PHF20L1A8MW92 1017 aa9.43□□□□□ -0.9
HDAC9-221ENST00000471887 ZBTB42B2RXF5 422 aa9.43□□□□□ -0.9
HDAC9-221ENST00000471887 HOXD8P13378 290 aaPredicted RBP9.43□□□□□ -0.9
HDAC9-221ENST00000471887 PODNQ7Z5L7 613 aa9.43□□□□□ -0.9
HDAC9-221ENST00000471887 FAM35AQ86V20 835 aa9.43□□□□□ -0.9
HDAC9-221ENST00000471887 NSUN5Q96P11 429 aaKnown RBP9.43□□□□□ -0.9
HDAC9-221ENST00000471887 DCTN4Q9UJW0 460 aa9.43□□□□□ -0.9
HDAC9-221ENST00000471887 MLLT1Q03111 559 aaPredicted RBP9.42□□□□□ -0.9
HDAC9-221ENST00000471887 TMC1Q8TDI8 760 aa9.42□□□□□ -0.9
HDAC9-221ENST00000471887 SCARF2Q96GP6 870 aaPredicted RBP9.42□□□□□ -0.9
HDAC9-221ENST00000471887 RBCK1Q9BYM8 510 aa9.42□□□□□ -0.9
HDAC9-221ENST00000471887 LOC102724428A0A0B4J2F2 783 aa9.41□□□□□ -0.9
HDAC9-221ENST00000471887 M0R082 166 aa9.41□□□□□ -0.9
HDAC9-221ENST00000471887 TNFRSF21O75509 655 aa9.41□□□□□ -0.9
HDAC9-221ENST00000471887 CPB1P15086 417 aa9.41□□□□□ -0.9
HDAC9-221ENST00000471887 DGKGP49619 791 aa9.41□□□□□ -0.9
HDAC9-221ENST00000471887 SIK1P57059 783 aa9.41□□□□□ -0.9
HDAC9-221ENST00000471887 HFE2Q6ZVN8 426 aa9.41□□□□□ -0.9
HDAC9-221ENST00000471887 BEND7Q8N7W2 519 aaPredicted RBP9.41□□□□□ -0.9
HDAC9-221ENST00000471887 ZNF417Q8TAU3 575 aa9.41□□□□□ -0.9
HDAC9-221ENST00000471887 SNX29Q8TEQ0 813 aa9.41□□□□□ -0.9
HDAC9-221ENST00000471887 PMEPA1Q969W9 287 aa9.41□□□□□ -0.9
HDAC9-221ENST00000471887 ZNF587Q96SQ5 575 aaPredicted RBP9.41□□□□□ -0.9
HDAC9-221ENST00000471887 NAGPAQ9UK23 515 aa9.41□□□□□ -0.9
HDAC9-221ENST00000471887 STARD13Q9Y3M8 1113 aa9.41□□□□□ -0.9
HDAC9-221ENST00000471887 ALBP02768 609 aa9.4□□□□□ -0.9
HDAC9-221ENST00000471887 EIF2AK2P19525 551 aaKnown RBP9.4□□□□□ -0.9
HDAC9-221ENST00000471887 MAPK1P28482 360 aa9.4□□□□□ -0.9
HDAC9-221ENST00000471887 SNRPNP63162 240 aaKnown RBP9.4□□□□□ -0.9
HDAC9-221ENST00000471887 HYAL2Q12891 473 aa9.4□□□□□ -0.9
HDAC9-221ENST00000471887 PSAPL1Q6NUJ1 521 aa9.4□□□□□ -0.9
HDAC9-221ENST00000471887 ELMSAN1Q6PJG2 1045 aa9.4□□□□□ -0.9
HDAC9-221ENST00000471887 FAM129BQ96TA1 746 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms