RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 RIC1Q4ADV7 1423 aa10.52□□□□□ -0.73
USP48-207ENST00000471752 CXCL9Q07325 125 aa10.52□□□□□ -0.73
USP48-207ENST00000471752 POTEHQ6S545 545 aa10.52□□□□□ -0.73
USP48-207ENST00000471752 G2E3Q7L622 706 aa10.52□□□□□ -0.73
USP48-207ENST00000471752 CCDC85AQ96PX6 553 aaPredicted RBP10.52□□□□□ -0.73
USP48-207ENST00000471752 SEC31BQ9NQW1 1179 aa10.52□□□□□ -0.73
USP48-207ENST00000471752 DBF4Q9UBU7 674 aaPredicted RBP10.52□□□□□ -0.73
USP48-207ENST00000471752 SALL2Q9Y467 1007 aaPredicted RBP10.52□□□□□ -0.73
USP48-207ENST00000471752 TAF1P21675 1872 aa10.51□□□□□ -0.73
USP48-207ENST00000471752 LTBP1Q14766 1721 aa10.51□□□□□ -0.73
USP48-207ENST00000471752 YDJCA8MPS7 323 aa10.51□□□□□ -0.73
USP48-207ENST00000471752 TRAF5O00463 557 aa10.51□□□□□ -0.73
USP48-207ENST00000471752 PPIP5K2O43314 1243 aa10.51□□□□□ -0.73
USP48-207ENST00000471752 RAD17O75943 681 aa10.51□□□□□ -0.73
USP48-207ENST00000471752 HIRAP54198 1017 aaPredicted RBP10.51□□□□□ -0.73
USP48-207ENST00000471752 LDHDQ86WU2 507 aa10.51□□□□□ -0.73
USP48-207ENST00000471752 SP8Q8IXZ3 490 aa10.51□□□□□ -0.73
USP48-207ENST00000471752 CNTROBQ8N137 903 aa10.51□□□□□ -0.73
USP48-207ENST00000471752 GPC2Q8N158 579 aa10.51□□□□□ -0.73
USP48-207ENST00000471752 JDP2Q8WYK2 163 aa10.51□□□□□ -0.73
USP48-207ENST00000471752 MYD88Q99836 296 aa10.51□□□□□ -0.73
USP48-207ENST00000471752 RTFDC1Q9BY42 306 aaPredicted RBP10.51□□□□□ -0.73
USP48-207ENST00000471752 IFT57Q9NWB7 429 aa10.51□□□□□ -0.73
USP48-207ENST00000471752 ARFGEF2Q9Y6D5 1785 aa10.51□□□□□ -0.73
USP48-207ENST00000471752 SH3TC1Q8TE82 1336 aa10.51□□□□□ -0.73
USP48-207ENST00000471752 BBOX1O75936 387 aa10.5□□□□□ -0.73
USP48-207ENST00000471752 VEGFBP49765 207 aa10.5□□□□□ -0.73
USP48-207ENST00000471752 GPSM2P81274 684 aa10.5□□□□□ -0.73
USP48-207ENST00000471752 GRAPQ13588 217 aa10.5□□□□□ -0.73
USP48-207ENST00000471752 CC2D2BQ6DHV5 1058 aa10.5□□□□□ -0.73
USP48-207ENST00000471752 MPNDQ8N594 471 aa10.5□□□□□ -0.73
USP48-207ENST00000471752 GRAPLQ8TC17 118 aaPredicted RBP10.5□□□□□ -0.73
USP48-207ENST00000471752 HYPKQ9NX55 129 aa10.5□□□□□ -0.73
USP48-207ENST00000471752 POLLQ9UGP5 575 aa10.5□□□□□ -0.73
USP48-207ENST00000471752 IQCA1LA6NCM1 817 aa10.49□□□□□ -0.73
USP48-207ENST00000471752 IRS4O14654 1257 aaPredicted RBP10.49□□□□□ -0.73
USP48-207ENST00000471752 RIMBP2O15034 1052 aa10.49□□□□□ -0.73
USP48-207ENST00000471752 EGFRP00533 1210 aa10.49□□□□□ -0.73
USP48-207ENST00000471752 HOXB7P09629 217 aa10.49□□□□□ -0.73
USP48-207ENST00000471752 HSPA1AP0DMV8 641 aaKnown RBP10.49□□□□□ -0.73
USP48-207ENST00000471752 HSPA1BP0DMV9 641 aaKnown RBP10.49□□□□□ -0.73
USP48-207ENST00000471752 GMPSP49915 693 aaPredicted RBP10.49□□□□□ -0.73
USP48-207ENST00000471752 EIF6P56537 245 aaKnown RBP10.49□□□□□ -0.73
USP48-207ENST00000471752 GNAI1P63096 354 aa10.49□□□□□ -0.73
USP48-207ENST00000471752 SF3B3Q15393 1217 aaKnown RBP10.49□□□□□ -0.73
USP48-207ENST00000471752 HSP90AB3PQ58FF7 597 aa10.49□□□□□ -0.73
USP48-207ENST00000471752 DPP8Q6V1X1 898 aaPredicted RBP10.49□□□□□ -0.73
USP48-207ENST00000471752 DDX46Q7L014 1031 aaKnown RBP10.49□□□□□ -0.73
USP48-207ENST00000471752 RIC3Q7Z5B4 369 aa10.49□□□□□ -0.73
USP48-207ENST00000471752 CREBZFQ9NS37 354 aa10.49□□□□□ -0.73
USP48-207ENST00000471752 ZBTB12Q9Y330 459 aaPredicted RBP10.49□□□□□ -0.73
USP48-207ENST00000471752 IGKV5-2P06315 115 aa10.48□□□□□ -0.73
USP48-207ENST00000471752 TRIM28Q13263 835 aaKnown RBP10.48□□□□□ -0.73
USP48-207ENST00000471752 DOK7Q18PE1 504 aa10.48□□□□□ -0.73
USP48-207ENST00000471752 CST9Q5W186 159 aa10.48□□□□□ -0.73
USP48-207ENST00000471752 WWC1Q8IX03 1113 aa10.48□□□□□ -0.73
USP48-207ENST00000471752 NIM1KQ8IY84 436 aa10.48□□□□□ -0.73
USP48-207ENST00000471752 TRPM4Q8TD43 1214 aa10.48□□□□□ -0.73
USP48-207ENST00000471752 ZNRF3Q9ULT6 936 aa10.48□□□□□ -0.73
USP48-207ENST00000471752 KIAA2012Q0VF49 1180 aa10.47□□□□□ -0.73
USP48-207ENST00000471752 DBNDD1Q9H9R9 158 aa10.47□□□□□ -0.73
USP48-207ENST00000471752 FOXD4L1Q9NU39 408 aa10.47□□□□□ -0.73
USP48-207ENST00000471752 NSFL1CQ9UNZ2 370 aaKnown RBP10.47□□□□□ -0.73
USP48-207ENST00000471752 MAP3K2Q9Y2U5 619 aa10.47□□□□□ -0.73
USP48-207ENST00000471752 PI4KAP2A4QPH2 592 aa10.46□□□□□ -0.73
USP48-207ENST00000471752 TMEM88BA6NKF7 163 aa10.46□□□□□ -0.73
USP48-207ENST00000471752 FOXN1O15353 648 aa10.46□□□□□ -0.73
USP48-207ENST00000471752 RPS8P62241 208 aaKnown RBP10.46□□□□□ -0.73
USP48-207ENST00000471752 CWF19L2Q2TBE0 894 aaKnown RBP10.46□□□□□ -0.73
USP48-207ENST00000471752 PI4KAP1Q8N8J0 262 aa10.46□□□□□ -0.73
USP48-207ENST00000471752 METTL22Q9BUU2 404 aaPredicted RBP10.46□□□□□ -0.73
USP48-207ENST00000471752 GLIS2Q9BZE0 524 aaPredicted RBP10.46□□□□□ -0.73
USP48-207ENST00000471752 GPRC5DQ9NZD1 345 aa10.46□□□□□ -0.73
USP48-207ENST00000471752 DUOX1Q9NRD9 1551 aa10.46□□□□□ -0.74
USP48-207ENST00000471752 LAMB2P55268 1798 aa10.46□□□□□ -0.74
USP48-207ENST00000471752 ADAMTSL1Q8N6G6 1762 aa10.45□□□□□ -0.74
USP48-207ENST00000471752 CNTNAP1P78357 1384 aa10.45□□□□□ -0.74
USP48-207ENST00000471752 RTL9Q8NET4 1388 aa10.45□□□□□ -0.74
USP48-207ENST00000471752 ASTN2O75129 1339 aaPredicted RBP10.45□□□□□ -0.74
USP48-207ENST00000471752 ZNF316A6NFI3 1004 aaPredicted RBP10.45□□□□□ -0.74
USP48-207ENST00000471752 C6orf229H3BNL8 230 aa10.45□□□□□ -0.74
USP48-207ENST00000471752 PSMD14O00487 310 aa10.45□□□□□ -0.74
USP48-207ENST00000471752 CIAPIN1Q6FI81 312 aa10.45□□□□□ -0.74
USP48-207ENST00000471752 SAMD7Q7Z3H4 446 aa10.45□□□□□ -0.74
USP48-207ENST00000471752 PNMA8AQ86V59 439 aaPredicted RBP10.45□□□□□ -0.74
USP48-207ENST00000471752 ZBTB38Q8NAP3 1195 aaPredicted RBP10.45□□□□□ -0.74
USP48-207ENST00000471752 TBC1D16Q8TBP0 767 aa10.45□□□□□ -0.74
USP48-207ENST00000471752 MRS2Q9HD23 443 aa10.45□□□□□ -0.74
USP48-207ENST00000471752 PCCAP05165 728 aaPredicted RBP10.44□□□□□ -0.74
USP48-207ENST00000471752 GOLGA2Q08379 1002 aa10.44□□□□□ -0.74
USP48-207ENST00000471752 POLA2Q14181 598 aa10.44□□□□□ -0.74
USP48-207ENST00000471752 WASHC4Q2M389 1173 aa10.44□□□□□ -0.74
USP48-207ENST00000471752 ZIC5Q96T25 663 aa10.44□□□□□ -0.74
USP48-207ENST00000471752 CNOT7Q9UIV1 285 aaKnown RBP10.44□□□□□ -0.74
USP48-207ENST00000471752 DDX60Q8IY21 1712 aaKnown RBP10.44□□□□□ -0.74
USP48-207ENST00000471752 SCN4AP35499 1836 aa10.43□□□□□ -0.74
USP48-207ENST00000471752 AOC2O75106 756 aa10.43□□□□□ -0.74
USP48-207ENST00000471752 LMOD1P29536 600 aaPredicted RBP10.43□□□□□ -0.74
USP48-207ENST00000471752 EXOSC9Q06265 439 aaKnown RBP10.43□□□□□ -0.74
USP48-207ENST00000471752 DEFB115Q30KQ5 88 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms