RNA–Protein interactions for RNA: ENST00000471563.5

GCOM1-206, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,275 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-206ENST00000471563 PALLDQ8WX93 1383 aa18.38■□□□□ 0.53
GCOM1-206ENST00000471563 AK9Q5TCS8 1911 aa18.37■□□□□ 0.53
GCOM1-206ENST00000471563 ERC2O15083 957 aa18.37■□□□□ 0.53
GCOM1-206ENST00000471563 OFD1O75665 1012 aa18.37■□□□□ 0.53
GCOM1-206ENST00000471563 CRKLP46109 303 aaKnown RBP18.37■□□□□ 0.53
GCOM1-206ENST00000471563 KCNQ4P56696 695 aa18.37■□□□□ 0.53
GCOM1-206ENST00000471563 MSNP26038 577 aaKnown RBP18.37■□□□□ 0.53
GCOM1-206ENST00000471563 TFCP2Q12800 502 aa18.37■□□□□ 0.53
GCOM1-206ENST00000471563 PKP1Q13835 747 aa18.37■□□□□ 0.53
GCOM1-206ENST00000471563 KIAA1211Q6ZU35 1233 aa18.37■□□□□ 0.53
GCOM1-206ENST00000471563 DZIP3Q86Y13 1208 aaKnown RBP18.37■□□□□ 0.53
GCOM1-206ENST00000471563 ESYT1Q9BSJ8 1104 aa18.37■□□□□ 0.53
GCOM1-206ENST00000471563 ECHDC1Q9NTX5 307 aa18.37■□□□□ 0.53
GCOM1-206ENST00000471563 TTC41PQ6P2S7 1318 aa18.36■□□□□ 0.53
GCOM1-206ENST00000471563 REC8O95072 547 aa18.36■□□□□ 0.53
GCOM1-206ENST00000471563 NCLP19338 710 aaKnown RBP18.36■□□□□ 0.53
GCOM1-206ENST00000471563 IL6STP40189 918 aaPredicted RBP18.36■□□□□ 0.53
GCOM1-206ENST00000471563 TRIM28Q13263 835 aaKnown RBP18.36■□□□□ 0.53
GCOM1-206ENST00000471563 MEX3CQ5U5Q3 659 aaKnown RBP18.36■□□□□ 0.53
GCOM1-206ENST00000471563 ZNF594Q96JF6 807 aaPredicted RBP18.36■□□□□ 0.53
GCOM1-206ENST00000471563 CCDC85AQ96PX6 553 aaPredicted RBP18.36■□□□□ 0.53
GCOM1-206ENST00000471563 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.35■□□□□ 0.53
GCOM1-206ENST00000471563 GLRX3O76003 335 aaKnown RBP18.35■□□□□ 0.53
GCOM1-206ENST00000471563 PDLIM2Q96JY6 352 aa18.35■□□□□ 0.53
GCOM1-206ENST00000471563 EIF5P55010 431 aaKnown RBP18.34■□□□□ 0.53
GCOM1-206ENST00000471563 NLRP10Q86W26 655 aa18.34■□□□□ 0.53
GCOM1-206ENST00000471563 RBSNQ9H1K0 784 aa18.34■□□□□ 0.53
GCOM1-206ENST00000471563 CCDC87Q9NVE4 849 aa18.34■□□□□ 0.53
GCOM1-206ENST00000471563 TERF1P54274 439 aa18.34■□□□□ 0.53
GCOM1-206ENST00000471563 ZGPATQ8N5A5 531 aaKnown RBP18.34■□□□□ 0.53
GCOM1-206ENST00000471563 PCCAP05165 728 aaPredicted RBP18.33■□□□□ 0.53
GCOM1-206ENST00000471563 ATG9AQ7Z3C6 839 aa18.33■□□□□ 0.53
GCOM1-206ENST00000471563 ZBTB38Q8NAP3 1195 aaPredicted RBP18.33■□□□□ 0.53
GCOM1-206ENST00000471563 ZDHHC9Q9Y397 364 aa18.33■□□□□ 0.53
GCOM1-206ENST00000471563 LRRC24Q50LG9 513 aa18.33■□□□□ 0.52
GCOM1-206ENST00000471563 TNNI3KQ59H18 835 aa18.33■□□□□ 0.52
GCOM1-206ENST00000471563 CNTROBQ8N137 903 aa18.33■□□□□ 0.52
GCOM1-206ENST00000471563 GPT2Q8TD30 523 aa18.33■□□□□ 0.52
GCOM1-206ENST00000471563 FPGT-TNNI3KV9GXZ4 949 aa18.33■□□□□ 0.52
GCOM1-206ENST00000471563 PRPF40AO75400 957 aaKnown RBP18.32■□□□□ 0.52
GCOM1-206ENST00000471563 GPATCH3Q96I76 525 aa18.32■□□□□ 0.52
GCOM1-206ENST00000471563 DBNLQ9UJU6 430 aaKnown RBP18.32■□□□□ 0.52
GCOM1-206ENST00000471563 AFF2P51816 1311 aa18.32■□□□□ 0.52
GCOM1-206ENST00000471563 PUS3Q9BZE2 481 aaKnown RBP18.32■□□□□ 0.52
GCOM1-206ENST00000471563 BOLA2Q9H3K6 86 aa18.32■□□□□ 0.52
GCOM1-206ENST00000471563 ANO2Q9NQ90 1003 aa18.32■□□□□ 0.52
GCOM1-206ENST00000471563 NOL7Q9UMY1 257 aaKnown RBP18.32■□□□□ 0.52
GCOM1-206ENST00000471563 MYH14Q7Z406 1995 aaKnown RBP18.31■□□□□ 0.52
GCOM1-206ENST00000471563 UBN2Q6ZU65 1347 aa18.31■□□□□ 0.52
GCOM1-206ENST00000471563 EP400Q96L91 3159 aa18.31■□□□□ 0.52
GCOM1-206ENST00000471563 GJD4Q96KN9 370 aaPredicted RBP18.3■□□□□ 0.52
GCOM1-206ENST00000471563 ERVV-1B6SEH8 477 aa18.3■□□□□ 0.52
GCOM1-206ENST00000471563 ZNF500O60304 480 aaPredicted RBP18.3■□□□□ 0.52
GCOM1-206ENST00000471563 SMIM5Q71RC9 77 aa18.3■□□□□ 0.52
GCOM1-206ENST00000471563 SMARCC1Q92922 1105 aaPredicted RBP18.3■□□□□ 0.52
GCOM1-206ENST00000471563 RBM27Q9P2N5 1060 aaKnown RBP18.3■□□□□ 0.52
GCOM1-206ENST00000471563 HSP90AB3PQ58FF7 597 aa18.29■□□□□ 0.52
GCOM1-206ENST00000471563 CWC27Q6UX04 472 aaKnown RBP18.29■□□□□ 0.52
GCOM1-206ENST00000471563 LINC00116Q8NCU8 138 aa18.29■□□□□ 0.52
GCOM1-206ENST00000471563 DBNDD2Q9BQY9 259 aa18.29■□□□□ 0.52
GCOM1-206ENST00000471563 TRMT112Q9UI30 125 aaKnown RBP18.29■□□□□ 0.52
GCOM1-206ENST00000471563 NDUFB9Q9Y6M9 179 aa18.29■□□□□ 0.52
GCOM1-206ENST00000471563 LRSAM1Q6UWE0 723 aa18.29■□□□□ 0.52
GCOM1-206ENST00000471563 NUP98P52948 1817 aa18.28■□□□□ 0.52
GCOM1-206ENST00000471563 FAM177BA6PVY3 158 aa18.28■□□□□ 0.52
GCOM1-206ENST00000471563 CCDC57Q2TAC2 916 aa18.28■□□□□ 0.52
GCOM1-206ENST00000471563 ZNF34Q8IZ26 560 aa18.28■□□□□ 0.52
GCOM1-206ENST00000471563 EDC3Q96F86 508 aaKnown RBP18.28■□□□□ 0.52
GCOM1-206ENST00000471563 PDCL3Q9H2J4 239 aa18.28■□□□□ 0.52
GCOM1-206ENST00000471563 EYA2O00167 538 aa18.28■□□□□ 0.52
GCOM1-206ENST00000471563 PLA2G12BQ9BX93 195 aa18.28■□□□□ 0.52
GCOM1-206ENST00000471563 PALD1Q9ULE6 856 aa18.28■□□□□ 0.52
GCOM1-206ENST00000471563 THSD7AQ9UPZ6 1657 aa18.27■□□□□ 0.52
GCOM1-206ENST00000471563 CAMTA2O94983 1202 aa18.27■□□□□ 0.52
GCOM1-206ENST00000471563 CSF1RP07333 972 aa18.27■□□□□ 0.52
GCOM1-206ENST00000471563 TIMM10P62072 90 aa18.27■□□□□ 0.52
GCOM1-206ENST00000471563 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.27■□□□□ 0.52
GCOM1-206ENST00000471563 TMEM63CQ9P1W3 806 aa18.27■□□□□ 0.52
GCOM1-206ENST00000471563 IRS4O14654 1257 aaPredicted RBP18.26■□□□□ 0.51
GCOM1-206ENST00000471563 SGSM2O43147 1006 aa18.26■□□□□ 0.51
GCOM1-206ENST00000471563 MBD3O95983 291 aa18.26■□□□□ 0.51
GCOM1-206ENST00000471563 MCM2P49736 904 aa18.26■□□□□ 0.51
GCOM1-206ENST00000471563 CDHR2Q9BYE9 1310 aa18.26■□□□□ 0.51
GCOM1-206ENST00000471563 IL15P40933 162 aaPredicted RBP18.26■□□□□ 0.51
GCOM1-206ENST00000471563 SUSD4Q5VX71 490 aa18.26■□□□□ 0.51
GCOM1-206ENST00000471563 TTLL11Q8NHH1 800 aa18.26■□□□□ 0.51
GCOM1-206ENST00000471563 EVI5LQ96CN4 794 aa18.26■□□□□ 0.51
GCOM1-206ENST00000471563 NEUROD6Q96NK8 337 aa18.26■□□□□ 0.51
GCOM1-206ENST00000471563 GREM2Q9H772 168 aa18.26■□□□□ 0.51
GCOM1-206ENST00000471563 MCM5P33992 734 aa18.25■□□□□ 0.51
GCOM1-206ENST00000471563 ANKRD36CQ5JPF3 1778 aa18.25■□□□□ 0.51
GCOM1-206ENST00000471563 TMX3Q96JJ7 454 aa18.25■□□□□ 0.51
GCOM1-206ENST00000471563 DIAPH3Q9NSV4 1193 aa18.25■□□□□ 0.51
GCOM1-206ENST00000471563 ZKSCAN5Q9Y2L8 839 aa18.25■□□□□ 0.51
GCOM1-206ENST00000471563 CTSWP56202 376 aa18.24■□□□□ 0.51
GCOM1-206ENST00000471563 IFIT5Q13325 482 aaKnown RBP18.24■□□□□ 0.51
GCOM1-206ENST00000471563 BRD1O95696 1058 aa18.24■□□□□ 0.51
GCOM1-206ENST00000471563 CUL4AQ13619 759 aa18.24■□□□□ 0.51
GCOM1-206ENST00000471563 FAM227BQ96M60 508 aa18.24■□□□□ 0.51
GCOM1-206ENST00000471563 RREB1Q92766 1687 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms