RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 SPATA31A5Q5VU36 1347 aa7.85□□□□□ -1.15
SPEN-204ENST00000471538 SPATA31A7Q8IWB4 1347 aa7.85□□□□□ -1.15
SPEN-204ENST00000471538 TOGARAM1Q9Y4F4 1720 aa7.85□□□□□ -1.15
SPEN-204ENST00000471538 COL15A1P39059 1388 aa7.85□□□□□ -1.15
SPEN-204ENST00000471538 GRM8O00222 908 aa7.85□□□□□ -1.15
SPEN-204ENST00000471538 EPB41L2O43491 1005 aaKnown RBP7.85□□□□□ -1.15
SPEN-204ENST00000471538 DDX58O95786 925 aaKnown RBP7.85□□□□□ -1.15
SPEN-204ENST00000471538 HSP90AB4PQ58FF6 505 aa7.85□□□□□ -1.15
SPEN-204ENST00000471538 NUTM1Q86Y26 1132 aa7.85□□□□□ -1.15
SPEN-204ENST00000471538 SUCLG2Q96I99 432 aa7.85□□□□□ -1.15
SPEN-204ENST00000471538 BCL11AQ9H165 835 aa7.85□□□□□ -1.15
SPEN-204ENST00000471538 TNS2Q63HR2 1409 aa7.85□□□□□ -1.15
SPEN-204ENST00000471538 AFDNP55196 1824 aaKnown RBP7.84□□□□□ -1.15
SPEN-204ENST00000471538 NEURL1BA8MQ27 555 aa7.84□□□□□ -1.15
SPEN-204ENST00000471538 TRIM37O94972 964 aa7.84□□□□□ -1.15
SPEN-204ENST00000471538 SNRPA1P09661 255 aaKnown RBP7.84□□□□□ -1.15
SPEN-204ENST00000471538 NKX1-1Q15270 411 aaPredicted RBP7.84□□□□□ -1.15
SPEN-204ENST00000471538 CLEC17AQ6ZS10 378 aa7.84□□□□□ -1.15
SPEN-204ENST00000471538 METTL22Q9BUU2 404 aaPredicted RBP7.84□□□□□ -1.15
SPEN-204ENST00000471538 IL25Q9H293 177 aa7.84□□□□□ -1.15
SPEN-204ENST00000471538 HDAC5Q9UQL6 1122 aa7.84□□□□□ -1.15
SPEN-204ENST00000471538 USP16Q9Y5T5 823 aa7.84□□□□□ -1.15
SPEN-204ENST00000471538 TTC41PQ6P2S7 1318 aa7.83□□□□□ -1.16
SPEN-204ENST00000471538 TJP1Q07157 1748 aa7.83□□□□□ -1.16
SPEN-204ENST00000471538 CYP2E1P05181 493 aaPredicted RBP7.83□□□□□ -1.16
SPEN-204ENST00000471538 ANAPC15P60006 121 aa7.83□□□□□ -1.16
SPEN-204ENST00000471538 LARP1Q6PKG0 1096 aaKnown RBP7.83□□□□□ -1.16
SPEN-204ENST00000471538 XAGE3Q8WTP9 111 aa7.83□□□□□ -1.16
SPEN-204ENST00000471538 TNPO1Q92973 898 aaKnown RBP7.83□□□□□ -1.16
SPEN-204ENST00000471538 FMNL2Q96PY5 1086 aa7.83□□□□□ -1.16
SPEN-204ENST00000471538 CARD10Q9BWT7 1032 aa7.83□□□□□ -1.16
SPEN-204ENST00000471538 BICC1Q9H694 974 aaKnown RBP7.83□□□□□ -1.16
SPEN-204ENST00000471538 C9orf78Q9NZ63 289 aaPredicted RBP7.83□□□□□ -1.16
SPEN-204ENST00000471538 ERBB4Q15303 1308 aa7.83□□□□□ -1.16
SPEN-204ENST00000471538 PCDH11XQ9BZA7 1347 aa7.83□□□□□ -1.16
SPEN-204ENST00000471538 PCDH11YQ9BZA8 1340 aa7.83□□□□□ -1.16
SPEN-204ENST00000471538 TRIM6-TRIM34B2RNG4 842 aa7.82□□□□□ -1.16
SPEN-204ENST00000471538 CABP4P57796 275 aa7.82□□□□□ -1.16
SPEN-204ENST00000471538 AIMP1Q12904 312 aaKnown RBP7.82□□□□□ -1.16
SPEN-204ENST00000471538 GCKRQ14397 625 aa7.82□□□□□ -1.16
SPEN-204ENST00000471538 COPS6Q7L5N1 327 aa7.82□□□□□ -1.16
SPEN-204ENST00000471538 ERC1Q8IUD2 1116 aa7.82□□□□□ -1.16
SPEN-204ENST00000471538 TTC5Q8N0Z6 440 aa7.82□□□□□ -1.16
SPEN-204ENST00000471538 ZCRB1Q8TBF4 217 aaKnown RBP7.82□□□□□ -1.16
SPEN-204ENST00000471538 RILPL2Q969X0 211 aa7.82□□□□□ -1.16
SPEN-204ENST00000471538 PRDM11Q9NQV5 511 aa7.82□□□□□ -1.16
SPEN-204ENST00000471538 PALD1Q9ULE6 856 aa7.82□□□□□ -1.16
SPEN-204ENST00000471538 PA2G4Q9UQ80 394 aaKnown RBP7.82□□□□□ -1.16
SPEN-204ENST00000471538 DDX11L8A8MPP1 907 aa7.81□□□□□ -1.16
SPEN-204ENST00000471538 ERVV-2B6SEH9 535 aa7.81□□□□□ -1.16
SPEN-204ENST00000471538 SGSM2O43147 1006 aa7.81□□□□□ -1.16
SPEN-204ENST00000471538 GLRX3O76003 335 aaKnown RBP7.81□□□□□ -1.16
SPEN-204ENST00000471538 SASH1O94885 1247 aa7.81□□□□□ -1.16
SPEN-204ENST00000471538 APBA3O96018 575 aa7.81□□□□□ -1.16
SPEN-204ENST00000471538 MYL6BP14649 208 aa7.81□□□□□ -1.16
SPEN-204ENST00000471538 RFX5P48382 616 aaPredicted RBP7.81□□□□□ -1.16
SPEN-204ENST00000471538 CASP7P55210 303 aa7.81□□□□□ -1.16
SPEN-204ENST00000471538 RABL6Q3YEC7 729 aaPredicted RBP7.81□□□□□ -1.16
SPEN-204ENST00000471538 EPHA10Q5JZY3 1008 aa7.81□□□□□ -1.16
SPEN-204ENST00000471538 RIC3Q7Z5B4 369 aa7.81□□□□□ -1.16
SPEN-204ENST00000471538 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.81□□□□□ -1.16
SPEN-204ENST00000471538 SPATA31A1Q5TZJ5 1347 aa7.81□□□□□ -1.16
SPEN-204ENST00000471538 RAD50Q92878 1312 aa7.81□□□□□ -1.16
SPEN-204ENST00000471538 CASZ1Q86V15 1759 aa7.81□□□□□ -1.16
SPEN-204ENST00000471538 NBPF26B4DH59 902 aa7.8□□□□□ -1.16
SPEN-204ENST00000471538 IL2RBP14784 551 aa7.8□□□□□ -1.16
SPEN-204ENST00000471538 SSFA2P28290 1259 aa7.8□□□□□ -1.16
SPEN-204ENST00000471538 HSPA4P34932 840 aa7.8□□□□□ -1.16
SPEN-204ENST00000471538 NEXNQ0ZGT2 675 aa7.8□□□□□ -1.16
SPEN-204ENST00000471538 NBPF14Q5TI25 921 aa7.8□□□□□ -1.16
SPEN-204ENST00000471538 NBPF10Q6P3W6 841 aaKnown RBP7.8□□□□□ -1.16
SPEN-204ENST00000471538 ANKRD13DQ6ZTN6 518 aa7.8□□□□□ -1.16
SPEN-204ENST00000471538 TOM1L2Q6ZVM7 507 aa7.8□□□□□ -1.16
SPEN-204ENST00000471538 MICALL2Q8IY33 904 aa7.8□□□□□ -1.16
SPEN-204ENST00000471538 CNTROBQ8N137 903 aa7.8□□□□□ -1.16
SPEN-204ENST00000471538 CLASRPQ8N2M8 674 aaKnown RBP7.8□□□□□ -1.16
SPEN-204ENST00000471538 NBPF15Q8N660 670 aa7.8□□□□□ -1.16
SPEN-204ENST00000471538 IL27Q8NEV9 243 aa7.8□□□□□ -1.16
SPEN-204ENST00000471538 MYD88Q99836 296 aa7.8□□□□□ -1.16
SPEN-204ENST00000471538 LSG1Q9H089 658 aaKnown RBP7.8□□□□□ -1.16
SPEN-204ENST00000471538 ANO2Q9NQ90 1003 aa7.8□□□□□ -1.16
SPEN-204ENST00000471538 ECHDC1Q9NTX5 307 aa7.8□□□□□ -1.16
SPEN-204ENST00000471538 WNK3Q9BYP7 1800 aa7.8□□□□□ -1.16
SPEN-204ENST00000471538 FSD2A1L4K1 749 aa7.79□□□□□ -1.16
SPEN-204ENST00000471538 TRAK2O60296 914 aa7.79□□□□□ -1.16
SPEN-204ENST00000471538 MAP4K4O95819 1239 aaPredicted RBP7.79□□□□□ -1.16
SPEN-204ENST00000471538 MCCP23508 829 aa7.79□□□□□ -1.16
SPEN-204ENST00000471538 PIP4K2AP48426 406 aaPredicted RBP7.79□□□□□ -1.16
SPEN-204ENST00000471538 MCM2P49736 904 aa7.79□□□□□ -1.16
SPEN-204ENST00000471538 CUL4AQ13619 759 aa7.79□□□□□ -1.16
SPEN-204ENST00000471538 PLBD2Q8NHP8 589 aa7.79□□□□□ -1.16
SPEN-204ENST00000471538 EAF2Q96CJ1 260 aaPredicted RBP7.79□□□□□ -1.16
SPEN-204ENST00000471538 GBP4Q96PP9 640 aa7.79□□□□□ -1.16
SPEN-204ENST00000471538 PDGFDQ9GZP0 370 aaPredicted RBP7.79□□□□□ -1.16
SPEN-204ENST00000471538 CWC22Q9HCG8 908 aaKnown RBP7.79□□□□□ -1.16
SPEN-204ENST00000471538 COPRSQ9NQ92 184 aa7.79□□□□□ -1.16
SPEN-204ENST00000471538 SNRKQ9NRH2 765 aa7.79□□□□□ -1.16
SPEN-204ENST00000471538 GOLGB1Q14789 3259 aaKnown RBP7.79□□□□□ -1.16
SPEN-204ENST00000471538 KCNQ2O43526 872 aa7.78□□□□□ -1.16
SPEN-204ENST00000471538 HSP90AA1P07900 732 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms