RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 SOGA3Q5TF21 947 aa22.43■■□□□ 1.18
VPS72-204ENST00000471423 SLC51AQ86UW1 340 aa22.43■■□□□ 1.18
VPS72-204ENST00000471423 CCDC85AQ96PX6 553 aaPredicted RBP22.43■■□□□ 1.18
VPS72-204ENST00000471423 FER1L6Q2WGJ9 1857 aa22.43■■□□□ 1.18
VPS72-204ENST00000471423 NFKBIEO00221 500 aa22.42■■□□□ 1.18
VPS72-204ENST00000471423 GRAPQ13588 217 aa22.42■■□□□ 1.18
VPS72-204ENST00000471423 CCDC152Q4G0S7 254 aa22.42■■□□□ 1.18
VPS72-204ENST00000471423 CCDC93Q567U6 631 aa22.42■■□□□ 1.18
VPS72-204ENST00000471423 GRAPLQ8TC17 118 aaPredicted RBP22.42■■□□□ 1.18
VPS72-204ENST00000471423 ARHGAP45Q92619 1136 aa22.42■■□□□ 1.18
VPS72-204ENST00000471423 C9orf78Q9NZ63 289 aaPredicted RBP22.42■■□□□ 1.18
VPS72-204ENST00000471423 YY1P25490 414 aa22.41■■□□□ 1.18
VPS72-204ENST00000471423 PLA2G12BQ9BX93 195 aa22.41■■□□□ 1.18
VPS72-204ENST00000471423 IPO8O15397 1037 aaKnown RBP22.4■■□□□ 1.18
VPS72-204ENST00000471423 TTLL11Q8NHH1 800 aa22.4■■□□□ 1.18
VPS72-204ENST00000471423 CELF1Q92879 486 aaKnown RBP22.4■■□□□ 1.18
VPS72-204ENST00000471423 SEC31BQ9NQW1 1179 aa22.4■■□□□ 1.18
VPS72-204ENST00000471423 TNNQ9UQP3 1299 aa22.4■■□□□ 1.18
VPS72-204ENST00000471423 SNED1Q8TER0 1413 aa22.4■■□□□ 1.18
VPS72-204ENST00000471423 BBOX1O75936 387 aa22.39■■□□□ 1.17
VPS72-204ENST00000471423 TRIM27P14373 513 aa22.39■■□□□ 1.17
VPS72-204ENST00000471423 ATF7IPQ6VMQ6 1270 aa22.39■■□□□ 1.17
VPS72-204ENST00000471423 NBPF7P0C2Y1 421 aaPredicted RBP22.38■■□□□ 1.17
VPS72-204ENST00000471423 CCT4P50991 539 aaKnown RBP22.38■■□□□ 1.17
VPS72-204ENST00000471423 PRELPP51888 382 aa22.38■■□□□ 1.17
VPS72-204ENST00000471423 TAOK3Q9H2K8 898 aa22.38■■□□□ 1.17
VPS72-204ENST00000471423 GREM2Q9H772 168 aa22.38■■□□□ 1.17
VPS72-204ENST00000471423 ATP6V0A2Q9Y487 856 aa22.38■■□□□ 1.17
VPS72-204ENST00000471423 SBF1O95248 1867 aa22.38■■□□□ 1.17
VPS72-204ENST00000471423 UTYO14607 1347 aa22.37■■□□□ 1.17
VPS72-204ENST00000471423 C9orf131Q5VYM1 1079 aa22.37■■□□□ 1.17
VPS72-204ENST00000471423 ZKSCAN2Q63HK3 967 aa22.37■■□□□ 1.17
VPS72-204ENST00000471423 RTKN2Q8IZC4 609 aa22.37■■□□□ 1.17
VPS72-204ENST00000471423 LRRC37AA6NMS7 1700 aa22.37■■□□□ 1.17
VPS72-204ENST00000471423 LTBP3Q9NS15 1303 aa22.36■■□□□ 1.17
VPS72-204ENST00000471423 FOXO4P98177 505 aa22.36■■□□□ 1.17
VPS72-204ENST00000471423 CC2D2BQ6DHV5 1058 aa22.36■■□□□ 1.17
VPS72-204ENST00000471423 CLUAP1Q96AJ1 413 aa22.36■■□□□ 1.17
VPS72-204ENST00000471423 SUCLG2Q96I99 432 aa22.36■■□□□ 1.17
VPS72-204ENST00000471423 RNF181Q9P0P0 153 aa22.36■■□□□ 1.17
VPS72-204ENST00000471423 RTL9Q8NET4 1388 aa22.36■■□□□ 1.17
VPS72-204ENST00000471423 LMNB1P20700 586 aa22.35■■□□□ 1.17
VPS72-204ENST00000471423 RPS8P62241 208 aaKnown RBP22.35■■□□□ 1.17
VPS72-204ENST00000471423 FKBP4Q02790 459 aaKnown RBP eCLIP22.35■■□□□ 1.17
VPS72-204ENST00000471423 FAM161AQ3B820 660 aa22.35■■□□□ 1.17
VPS72-204ENST00000471423 EPHA10Q5JZY3 1008 aa22.35■■□□□ 1.17
VPS72-204ENST00000471423 TMC4Q7Z404 712 aa22.35■■□□□ 1.17
VPS72-204ENST00000471423 USP44Q9H0E7 712 aa22.35■■□□□ 1.17
VPS72-204ENST00000471423 TMX4Q9H1E5 349 aaPredicted RBP22.35■■□□□ 1.17
VPS72-204ENST00000471423 CSF1RP07333 972 aa22.34■■□□□ 1.17
VPS72-204ENST00000471423 SP8Q8IXZ3 490 aa22.34■■□□□ 1.17
VPS72-204ENST00000471423 RCAN3Q9UKA8 241 aa22.34■■□□□ 1.17
VPS72-204ENST00000471423 CCDC88AQ3V6T2 1871 aa22.33■■□□□ 1.17
VPS72-204ENST00000471423 ITGA6P23229 1130 aa22.33■■□□□ 1.17
VPS72-204ENST00000471423 INTS3Q68E01 1043 aaKnown RBP22.33■■□□□ 1.17
VPS72-204ENST00000471423 LMBR1LQ6UX01 489 aa22.33■■□□□ 1.17
VPS72-204ENST00000471423 ANKRD18AQ8IVF6 992 aa22.33■■□□□ 1.17
VPS72-204ENST00000471423 KAZALD1Q96I82 304 aa22.33■■□□□ 1.17
VPS72-204ENST00000471423 CDC5LQ99459 802 aaKnown RBP22.33■■□□□ 1.17
VPS72-204ENST00000471423 CHMP3Q9Y3E7 222 aa22.33■■□□□ 1.17
VPS72-204ENST00000471423 TIAM2Q8IVF5 1701 aa22.33■■□□□ 1.17
VPS72-204ENST00000471423 SPEF2Q9C093 1822 aa22.33■■□□□ 1.16
VPS72-204ENST00000471423 GRIPAP1Q4V328 841 aa22.32■■□□□ 1.16
VPS72-204ENST00000471423 PSMD1Q99460 953 aa22.32■■□□□ 1.16
VPS72-204ENST00000471423 ZNF277Q9NRM2 450 aaPredicted RBP22.32■■□□□ 1.16
VPS72-204ENST00000471423 BICC1Q9H694 974 aaKnown RBP22.31■■□□□ 1.16
VPS72-204ENST00000471423 DPP8Q6V1X1 898 aaPredicted RBP22.3■■□□□ 1.16
VPS72-204ENST00000471423 FTSJ3Q8IY81 847 aaKnown RBP22.3■■□□□ 1.16
VPS72-204ENST00000471423 DUOX1Q9NRD9 1551 aa22.29■■□□□ 1.16
VPS72-204ENST00000471423 UBTFL1P0CB47 393 aaPredicted RBP22.29■■□□□ 1.16
VPS72-204ENST00000471423 MPNDQ8N594 471 aa22.29■■□□□ 1.16
VPS72-204ENST00000471423 TMEM57Q8N5G2 664 aa22.29■■□□□ 1.16
VPS72-204ENST00000471423 MEIS3Q99687 375 aa22.29■■□□□ 1.16
VPS72-204ENST00000471423 DICER1Q9UPY3 1922 aaKnown RBP22.29■■□□□ 1.16
VPS72-204ENST00000471423 LTBP1Q14766 1721 aa22.28■■□□□ 1.16
VPS72-204ENST00000471423 ANKRD18BA2A2Z9 1011 aa22.28■■□□□ 1.16
VPS72-204ENST00000471423 IGHMBP2P38935 993 aaKnown RBP22.28■■□□□ 1.16
VPS72-204ENST00000471423 IFIT5Q13325 482 aaKnown RBP22.28■■□□□ 1.16
VPS72-204ENST00000471423 DZIP1LQ8IYY4 767 aaKnown RBP22.28■■□□□ 1.16
VPS72-204ENST00000471423 ANKRD44Q8N8A2 993 aa22.28■■□□□ 1.16
VPS72-204ENST00000471423 RLBP1P12271 317 aa22.27■■□□□ 1.16
VPS72-204ENST00000471423 IARSP41252 1262 aaKnown RBP22.27■■□□□ 1.16
VPS72-204ENST00000471423 GPSM2P81274 684 aa22.27■■□□□ 1.16
VPS72-204ENST00000471423 RABL6Q3YEC7 729 aaPredicted RBP22.27■■□□□ 1.16
VPS72-204ENST00000471423 NSFL1CQ9UNZ2 370 aaKnown RBP22.27■■□□□ 1.16
VPS72-204ENST00000471423 CCDC57Q2TAC2 916 aa22.26■■□□□ 1.15
VPS72-204ENST00000471423 ZNF784Q8NCA9 323 aaPredicted RBP22.26■■□□□ 1.15
VPS72-204ENST00000471423 RTFDC1Q9BY42 306 aaPredicted RBP22.26■■□□□ 1.15
VPS72-204ENST00000471423 BSDC1Q9NW68 430 aaPredicted RBP22.26■■□□□ 1.15
VPS72-204ENST00000471423 MPHOSPH8Q99549 860 aa22.25■■□□□ 1.15
VPS72-204ENST00000471423 COL4A5P29400 1685 aa22.25■■□□□ 1.15
VPS72-204ENST00000471423 ZC3H4Q9UPT8 1303 aaKnown RBP22.25■■□□□ 1.15
VPS72-204ENST00000471423 PLIN1O60240 522 aa22.24■■□□□ 1.15
VPS72-204ENST00000471423 ITPRIPQ8IWB1 547 aa22.24■■□□□ 1.15
VPS72-204ENST00000471423 SUPT20HQ8NEM7 779 aa22.24■■□□□ 1.15
VPS72-204ENST00000471423 ZNF526Q8TF50 670 aaPredicted RBP22.24■■□□□ 1.15
VPS72-204ENST00000471423 ZNF594Q96JF6 807 aaPredicted RBP22.24■■□□□ 1.15
VPS72-204ENST00000471423 ANKIB1Q9P2G1 1089 aa22.24■■□□□ 1.15
VPS72-204ENST00000471423 LRRFIP2Q9Y608 721 aaKnown RBP22.24■■□□□ 1.15
VPS72-204ENST00000471423 PPIP5K2O43314 1243 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms