RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 TRIM28Q13263 835 aaKnown RBP19.82■□□□□ 0.76
COL1A1-203ENST00000471344 GRIPAP1Q4V328 841 aa19.82■□□□□ 0.76
COL1A1-203ENST00000471344 SP8Q8IXZ3 490 aa19.82■□□□□ 0.76
COL1A1-203ENST00000471344 GPC2Q8N158 579 aa19.82■□□□□ 0.76
COL1A1-203ENST00000471344 HACL1Q9UJ83 578 aa19.82■□□□□ 0.76
COL1A1-203ENST00000471344 EPHX2P34913 555 aa19.81■□□□□ 0.76
COL1A1-203ENST00000471344 EIF6P56537 245 aaKnown RBP19.81■□□□□ 0.76
COL1A1-203ENST00000471344 DPP8Q6V1X1 898 aaPredicted RBP19.81■□□□□ 0.76
COL1A1-203ENST00000471344 G2E3Q7L622 706 aa19.81■□□□□ 0.76
COL1A1-203ENST00000471344 RTFDC1Q9BY42 306 aaPredicted RBP19.81■□□□□ 0.76
COL1A1-203ENST00000471344 FANCIQ9NVI1 1328 aa19.8■□□□□ 0.76
COL1A1-203ENST00000471344 SF3B3Q15393 1217 aaKnown RBP19.8■□□□□ 0.76
COL1A1-203ENST00000471344 TWISTNBQ3B726 338 aaPredicted RBP19.8■□□□□ 0.76
COL1A1-203ENST00000471344 LDHDQ86WU2 507 aa19.8■□□□□ 0.76
COL1A1-203ENST00000471344 NIM1KQ8IY84 436 aa19.8■□□□□ 0.76
COL1A1-203ENST00000471344 MPNDQ8N594 471 aa19.8■□□□□ 0.76
COL1A1-203ENST00000471344 MAP3K2Q9Y2U5 619 aa19.8■□□□□ 0.76
COL1A1-203ENST00000471344 IL16Q14005 1332 aa19.79■□□□□ 0.76
COL1A1-203ENST00000471344 SCNN1DP51172 638 aa19.79■□□□□ 0.76
COL1A1-203ENST00000471344 ZBTB38Q8NAP3 1195 aaPredicted RBP19.79■□□□□ 0.76
COL1A1-203ENST00000471344 METTL22Q9BUU2 404 aaPredicted RBP19.79■□□□□ 0.76
COL1A1-203ENST00000471344 TMX4Q9H1E5 349 aaPredicted RBP19.79■□□□□ 0.76
COL1A1-203ENST00000471344 SPINK5Q9NQ38 1064 aaPredicted RBP19.78■□□□□ 0.76
COL1A1-203ENST00000471344 SEC31BQ9NQW1 1179 aa19.78■□□□□ 0.76
COL1A1-203ENST00000471344 PI4KAP2A4QPH2 592 aa19.77■□□□□ 0.76
COL1A1-203ENST00000471344 IGKV5-2P06315 115 aa19.77■□□□□ 0.76
COL1A1-203ENST00000471344 EPS15P42566 896 aa19.77■□□□□ 0.76
COL1A1-203ENST00000471344 FAM9BQ8IZU0 186 aa19.77■□□□□ 0.76
COL1A1-203ENST00000471344 PI4KAP1Q8N8J0 262 aa19.77■□□□□ 0.76
COL1A1-203ENST00000471344 CCDC191Q8NCU4 936 aa19.77■□□□□ 0.76
COL1A1-203ENST00000471344 CCDC85AQ96PX6 553 aaPredicted RBP19.77■□□□□ 0.76
COL1A1-203ENST00000471344 CWC25Q9NXE8 425 aaPredicted RBP19.77■□□□□ 0.76
COL1A1-203ENST00000471344 PASKQ96RG2 1323 aa19.76■□□□□ 0.75
COL1A1-203ENST00000471344 DDX58O95786 925 aaKnown RBP19.76■□□□□ 0.75
COL1A1-203ENST00000471344 PCCAP05165 728 aaPredicted RBP19.76■□□□□ 0.75
COL1A1-203ENST00000471344 CXCL9Q07325 125 aa19.76■□□□□ 0.75
COL1A1-203ENST00000471344 KIAA2012Q0VF49 1180 aa19.76■□□□□ 0.75
COL1A1-203ENST00000471344 MAP1SQ66K74 1059 aaPredicted RBP19.76■□□□□ 0.75
COL1A1-203ENST00000471344 JMYQ8N9B5 988 aa19.76■□□□□ 0.75
COL1A1-203ENST00000471344 SUPT20HQ8NEM7 779 aa19.76■□□□□ 0.75
COL1A1-203ENST00000471344 GPR101Q96P66 508 aaPredicted RBP19.76■□□□□ 0.75
COL1A1-203ENST00000471344 STK31Q9BXU1 1019 aa19.76■□□□□ 0.75
COL1A1-203ENST00000471344 CLEC11AQ9Y240 323 aa19.76■□□□□ 0.75
COL1A1-203ENST00000471344 YDJCA8MPS7 323 aa19.75■□□□□ 0.75
COL1A1-203ENST00000471344 ITGBL1O95965 494 aaPredicted RBP19.75■□□□□ 0.75
COL1A1-203ENST00000471344 GPSM2P81274 684 aa19.75■□□□□ 0.75
COL1A1-203ENST00000471344 CWF19L2Q2TBE0 894 aaKnown RBP19.75■□□□□ 0.75
COL1A1-203ENST00000471344 NCBP3Q53F19 620 aaKnown RBP19.75■□□□□ 0.75
COL1A1-203ENST00000471344 KSR2Q6VAB6 950 aa19.75■□□□□ 0.75
COL1A1-203ENST00000471344 SLC4A2P04920 1241 aa19.74■□□□□ 0.75
COL1A1-203ENST00000471344 EXOSC9Q06265 439 aaKnown RBP19.74■□□□□ 0.75
COL1A1-203ENST00000471344 ZNRF3Q9ULT6 936 aa19.74■□□□□ 0.75
COL1A1-203ENST00000471344 NSFL1CQ9UNZ2 370 aaKnown RBP19.74■□□□□ 0.75
COL1A1-203ENST00000471344 SPEF2Q9C093 1822 aa19.74■□□□□ 0.75
COL1A1-203ENST00000471344 RAD17O75943 681 aa19.73■□□□□ 0.75
COL1A1-203ENST00000471344 LMOD1P29536 600 aaPredicted RBP19.73■□□□□ 0.75
COL1A1-203ENST00000471344 TMC4Q7Z404 712 aa19.73■□□□□ 0.75
COL1A1-203ENST00000471344 WDR63Q8IWG1 891 aa19.73■□□□□ 0.75
COL1A1-203ENST00000471344 VPS33BQ9H267 617 aa19.73■□□□□ 0.75
COL1A1-203ENST00000471344 POLLQ9UGP5 575 aa19.73■□□□□ 0.75
COL1A1-203ENST00000471344 RIMBP2O15034 1052 aa19.72■□□□□ 0.75
COL1A1-203ENST00000471344 PDE8AO60658 829 aa19.72■□□□□ 0.75
COL1A1-203ENST00000471344 GMPSP49915 693 aaPredicted RBP19.72■□□□□ 0.75
COL1A1-203ENST00000471344 RPS8P62241 208 aaKnown RBP19.72■□□□□ 0.75
COL1A1-203ENST00000471344 PNMA8AQ86V59 439 aaPredicted RBP19.72■□□□□ 0.75
COL1A1-203ENST00000471344 CREBZFQ9NS37 354 aa19.72■□□□□ 0.75
COL1A1-203ENST00000471344 MKRN1Q9UHC7 482 aaKnown RBP19.72■□□□□ 0.75
COL1A1-203ENST00000471344 MYH3P11055 1940 aa19.71■□□□□ 0.75
COL1A1-203ENST00000471344 SHTN1A0MZ66 631 aa19.71■□□□□ 0.75
COL1A1-203ENST00000471344 NEURL1BA8MQ27 555 aa19.71■□□□□ 0.75
COL1A1-203ENST00000471344 VAMP4O75379 141 aa19.71■□□□□ 0.75
COL1A1-203ENST00000471344 FMR1Q06787 632 aaKnown RBP eCLIP19.71■□□□□ 0.75
COL1A1-203ENST00000471344 FLIIQ13045 1269 aa19.71■□□□□ 0.75
COL1A1-203ENST00000471344 CHMP4AQ9BY43 222 aa19.71■□□□□ 0.75
COL1A1-203ENST00000471344 DBNDD1Q9H9R9 158 aa19.71■□□□□ 0.75
COL1A1-203ENST00000471344 GPRC5DQ9NZD1 345 aa19.71■□□□□ 0.75
COL1A1-203ENST00000471344 C6orf229H3BNL8 230 aa19.7■□□□□ 0.74
COL1A1-203ENST00000471344 CCDC152Q4G0S7 254 aa19.7■□□□□ 0.74
COL1A1-203ENST00000471344 CIAPIN1Q6FI81 312 aa19.7■□□□□ 0.74
COL1A1-203ENST00000471344 CNTROBQ8N137 903 aa19.7■□□□□ 0.74
COL1A1-203ENST00000471344 CDHR2Q9BYE9 1310 aa19.7■□□□□ 0.74
COL1A1-203ENST00000471344 CTSWP56202 376 aa19.69■□□□□ 0.74
COL1A1-203ENST00000471344 WASHC4Q2M389 1173 aa19.69■□□□□ 0.74
COL1A1-203ENST00000471344 TBC1D16Q8TBP0 767 aa19.69■□□□□ 0.74
COL1A1-203ENST00000471344 KCNQ5Q9NR82 932 aa19.69■□□□□ 0.74
COL1A1-203ENST00000471344 SCN9AQ15858 1988 aa19.68■□□□□ 0.74
COL1A1-203ENST00000471344 NEXNQ0ZGT2 675 aa19.68■□□□□ 0.74
COL1A1-203ENST00000471344 FKBP5Q13451 457 aaPredicted RBP19.68■□□□□ 0.74
COL1A1-203ENST00000471344 DOK7Q18PE1 504 aa19.68■□□□□ 0.74
COL1A1-203ENST00000471344 UBE3BQ7Z3V4 1068 aa19.67■□□□□ 0.74
COL1A1-203ENST00000471344 GREM2Q9H772 168 aa19.67■□□□□ 0.74
COL1A1-203ENST00000471344 ZBTB12Q9Y330 459 aaPredicted RBP19.67■□□□□ 0.74
COL1A1-203ENST00000471344 CNTNAP1P78357 1384 aa19.67■□□□□ 0.74
COL1A1-203ENST00000471344 RTL9Q8NET4 1388 aa19.67■□□□□ 0.74
COL1A1-203ENST00000471344 CACNA1FO60840 1977 aa19.66■□□□□ 0.74
COL1A1-203ENST00000471344 WTIPA6NIX2 430 aaPredicted RBP19.66■□□□□ 0.74
COL1A1-203ENST00000471344 TMEM88BA6NKF7 163 aa19.66■□□□□ 0.74
COL1A1-203ENST00000471344 TRAF5O00463 557 aa19.66■□□□□ 0.74
COL1A1-203ENST00000471344 PSMD14O00487 310 aa19.66■□□□□ 0.74
COL1A1-203ENST00000471344 ECE2O60344 883 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms