RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 NOP58Q9Y2X3 529 aaKnown RBP12.05□□□□□ -0.48
CCM2-204ENST00000470837 AFDNP55196 1824 aaKnown RBP12.04□□□□□ -0.48
CCM2-204ENST00000470837 SCN7AQ01118 1682 aa12.04□□□□□ -0.48
CCM2-204ENST00000470837 SERPINB2P05120 415 aa12.04□□□□□ -0.48
CCM2-204ENST00000470837 CSF1RP07333 972 aa12.04□□□□□ -0.48
CCM2-204ENST00000470837 ITGA6P23229 1130 aa12.04□□□□□ -0.48
CCM2-204ENST00000470837 FAM161AQ3B820 660 aa12.04□□□□□ -0.48
CCM2-204ENST00000470837 CLASRPQ8N2M8 674 aaKnown RBP12.04□□□□□ -0.48
CCM2-204ENST00000470837 TTLL11Q8NHH1 800 aa12.04□□□□□ -0.48
CCM2-204ENST00000470837 UPF1Q92900 1129 aaKnown RBP eCLIP12.04□□□□□ -0.48
CCM2-204ENST00000470837 CDC5LQ99459 802 aaKnown RBP12.04□□□□□ -0.48
CCM2-204ENST00000470837 COPRSQ9NQ92 184 aa12.04□□□□□ -0.48
CCM2-204ENST00000470837 FBXO3Q9UK99 471 aa12.04□□□□□ -0.48
CCM2-204ENST00000470837 PA2G4Q9UQ80 394 aaKnown RBP12.04□□□□□ -0.48
CCM2-204ENST00000470837 TM4SF1P30408 202 aa12.03□□□□□ -0.48
CCM2-204ENST00000470837 IGHMBP2P38935 993 aaKnown RBP12.03□□□□□ -0.48
CCM2-204ENST00000470837 SLC10A5Q5PT55 438 aa12.03□□□□□ -0.48
CCM2-204ENST00000470837 RHPN1Q8TCX5 695 aa12.03□□□□□ -0.48
CCM2-204ENST00000470837 GPATCH3Q96I76 525 aa12.03□□□□□ -0.48
CCM2-204ENST00000470837 MPHOSPH8Q99549 860 aa12.03□□□□□ -0.48
CCM2-204ENST00000470837 GREM2Q9H772 168 aa12.03□□□□□ -0.48
CCM2-204ENST00000470837 BCORQ6W2J9 1755 aa12.02□□□□□ -0.48
CCM2-204ENST00000470837 CIAO1O76071 339 aa12.02□□□□□ -0.49
CCM2-204ENST00000470837 MMP10P09238 476 aa12.02□□□□□ -0.49
CCM2-204ENST00000470837 IL15P40933 162 aaPredicted RBP12.02□□□□□ -0.49
CCM2-204ENST00000470837 PTPN12Q05209 780 aaKnown RBP12.02□□□□□ -0.49
CCM2-204ENST00000470837 MSL1Q68DK7 614 aa12.02□□□□□ -0.49
CCM2-204ENST00000470837 LDHAL6AQ6ZMR3 332 aa12.02□□□□□ -0.49
CCM2-204ENST00000470837 DDX46Q7L014 1031 aaKnown RBP12.02□□□□□ -0.49
CCM2-204ENST00000470837 SLC16A10Q8TF71 515 aa12.02□□□□□ -0.49
CCM2-204ENST00000470837 CNNM1Q9NRU3 951 aa12.02□□□□□ -0.49
CCM2-204ENST00000470837 NUP98P52948 1817 aa12.02□□□□□ -0.49
CCM2-204ENST00000470837 ANKRD36CQ5JPF3 1778 aa12.01□□□□□ -0.49
CCM2-204ENST00000470837 EYA2O00167 538 aa12.01□□□□□ -0.49
CCM2-204ENST00000470837 POLRMTO00411 1230 aaKnown RBP12.01□□□□□ -0.49
CCM2-204ENST00000470837 SMARCA5O60264 1052 aaPredicted RBP12.01□□□□□ -0.49
CCM2-204ENST00000470837 IFIT2P09913 472 aaKnown RBP12.01□□□□□ -0.49
CCM2-204ENST00000470837 RFX5P48382 616 aaPredicted RBP12.01□□□□□ -0.49
CCM2-204ENST00000470837 SF3B3Q15393 1217 aaKnown RBP12.01□□□□□ -0.49
CCM2-204ENST00000470837 PRR5LQ6MZQ0 368 aa12.01□□□□□ -0.49
CCM2-204ENST00000470837 ANKRD18AQ8IVF6 992 aa12.01□□□□□ -0.49
CCM2-204ENST00000470837 KLHDC4Q8TBB5 520 aa12.01□□□□□ -0.49
CCM2-204ENST00000470837 RPGRQ92834 1020 aaKnown RBP12.01□□□□□ -0.49
CCM2-204ENST00000470837 IL1RAPL2Q9NP60 686 aa12.01□□□□□ -0.49
CCM2-204ENST00000470837 CEP126Q9P2H0 1117 aa12.01□□□□□ -0.49
CCM2-204ENST00000470837 UBR3Q6ZT12 1888 aa12.01□□□□□ -0.49
CCM2-204ENST00000470837 ZNF594Q96JF6 807 aaPredicted RBP12□□□□□ -0.49
CCM2-204ENST00000470837 AKAP2Q9Y2D5 859 aa12□□□□□ -0.49
CCM2-204ENST00000470837 RTL9Q8NET4 1388 aa12□□□□□ -0.49
CCM2-204ENST00000470837 POLD1P28340 1107 aa11.99□□□□□ -0.49
CCM2-204ENST00000470837 PDE6BP35913 854 aa11.99□□□□□ -0.49
CCM2-204ENST00000470837 DDR1Q08345 913 aa11.99□□□□□ -0.49
CCM2-204ENST00000470837 METTL24Q5JXM2 366 aa11.99□□□□□ -0.49
CCM2-204ENST00000470837 AACSQ86V21 672 aa11.99□□□□□ -0.49
CCM2-204ENST00000470837 CCDC24Q8N4L8 307 aa11.99□□□□□ -0.49
CCM2-204ENST00000470837 RBM17Q96I25 401 aaKnown RBP11.99□□□□□ -0.49
CCM2-204ENST00000470837 ABCC12Q96J65 1359 aa11.99□□□□□ -0.49
CCM2-204ENST00000470837 C4AP0C0L4 1744 aa11.99□□□□□ -0.49
CCM2-204ENST00000470837 MROH5Q6ZUA9 1318 aa11.98□□□□□ -0.49
CCM2-204ENST00000470837 MX1P20591 662 aa11.98□□□□□ -0.49
CCM2-204ENST00000470837 TFCP2Q12800 502 aa11.98□□□□□ -0.49
CCM2-204ENST00000470837 BRIP1Q9BX63 1249 aa11.98□□□□□ -0.49
CCM2-204ENST00000470837 TMX4Q9H1E5 349 aaPredicted RBP11.98□□□□□ -0.49
CCM2-204ENST00000470837 ERC2O15083 957 aa11.97□□□□□ -0.49
CCM2-204ENST00000470837 GORABQ5T7V8 394 aa11.97□□□□□ -0.49
CCM2-204ENST00000470837 SKAP1Q86WV1 359 aa11.97□□□□□ -0.49
CCM2-204ENST00000470837 SEC31BQ9NQW1 1179 aa11.97□□□□□ -0.49
CCM2-204ENST00000470837 RIC1Q4ADV7 1423 aa11.96□□□□□ -0.49
CCM2-204ENST00000470837 SASH1O94885 1247 aa11.96□□□□□ -0.49
CCM2-204ENST00000470837 PDE4AP27815 886 aa11.96□□□□□ -0.49
CCM2-204ENST00000470837 RPS8P62241 208 aaKnown RBP11.96□□□□□ -0.49
CCM2-204ENST00000470837 R3HDM1Q15032 1099 aaKnown RBP11.96□□□□□ -0.49
CCM2-204ENST00000470837 LRRC24Q50LG9 513 aa11.96□□□□□ -0.49
CCM2-204ENST00000470837 TNNI3KQ59H18 835 aa11.96□□□□□ -0.49
CCM2-204ENST00000470837 C16orf71Q8IYS4 520 aaPredicted RBP11.96□□□□□ -0.49
CCM2-204ENST00000470837 NEUROD6Q96NK8 337 aa11.96□□□□□ -0.49
CCM2-204ENST00000470837 PUS3Q9BZE2 481 aaKnown RBP11.96□□□□□ -0.49
CCM2-204ENST00000470837 GPR108Q9NPR9 543 aa11.96□□□□□ -0.49
CCM2-204ENST00000470837 FPGT-TNNI3KV9GXZ4 949 aa11.96□□□□□ -0.49
CCM2-204ENST00000470837 KCNJ4P48050 445 aa11.95□□□□□ -0.5
CCM2-204ENST00000470837 PDE1AP54750 535 aa11.95□□□□□ -0.5
CCM2-204ENST00000470837 GRAPQ13588 217 aa11.95□□□□□ -0.5
CCM2-204ENST00000470837 C3orf67Q6ZVT6 689 aa11.95□□□□□ -0.5
CCM2-204ENST00000470837 ATG9AQ7Z3C6 839 aa11.95□□□□□ -0.5
CCM2-204ENST00000470837 PLEKHM2Q8IWE5 1019 aa11.95□□□□□ -0.5
CCM2-204ENST00000470837 GRAPLQ8TC17 118 aaPredicted RBP11.95□□□□□ -0.5
CCM2-204ENST00000470837 MTFR1LQ9H019 292 aa11.95□□□□□ -0.5
CCM2-204ENST00000470837 BSDC1Q9NW68 430 aaPredicted RBP11.95□□□□□ -0.5
CCM2-204ENST00000470837 COL24A1Q17RW2 1714 aa11.94□□□□□ -0.5
CCM2-204ENST00000470837 AOX1Q06278 1338 aa11.94□□□□□ -0.5
CCM2-204ENST00000470837 TTC41PQ6P2S7 1318 aa11.94□□□□□ -0.5
CCM2-204ENST00000470837 H0YIN7 160 aa11.94□□□□□ -0.5
CCM2-204ENST00000470837 ZBTB7AO95365 584 aa11.94□□□□□ -0.5
CCM2-204ENST00000470837 IFIT1P09914 478 aaKnown RBP11.94□□□□□ -0.5
CCM2-204ENST00000470837 NPR1P16066 1061 aa11.94□□□□□ -0.5
CCM2-204ENST00000470837 ALDH1B1P30837 517 aa11.94□□□□□ -0.5
CCM2-204ENST00000470837 PUM3Q15397 648 aaKnown RBP11.94□□□□□ -0.5
CCM2-204ENST00000470837 ATP2B3Q16720 1220 aa11.94□□□□□ -0.5
CCM2-204ENST00000470837 CCDC158Q5M9N0 1113 aa11.94□□□□□ -0.5
CCM2-204ENST00000470837 CASC1Q6TDU7 716 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms