RNA–Protein interactions for RNA: ENST00000470695.1

IFT88-205, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-205ENST00000470695 NUTM1Q86Y26 1132 aa15.49■□□□□ 0.07
IFT88-205ENST00000470695 ERC1Q8IUD2 1116 aa15.49■□□□□ 0.07
IFT88-205ENST00000470695 SLC16A10Q8TF71 515 aa15.49■□□□□ 0.07
IFT88-205ENST00000470695 ZBTB47Q9UFB7 747 aaPredicted RBP15.49■□□□□ 0.07
IFT88-205ENST00000470695 EXOC6BQ9Y2D4 811 aa15.49■□□□□ 0.07
IFT88-205ENST00000470695 POLRMTO00411 1230 aaKnown RBP15.48■□□□□ 0.07
IFT88-205ENST00000470695 HCLS1P14317 486 aaPredicted RBP15.48■□□□□ 0.07
IFT88-205ENST00000470695 G3BP1Q13283 466 aaKnown RBP eCLIP15.48■□□□□ 0.07
IFT88-205ENST00000470695 IFIT5Q13325 482 aaKnown RBP15.48■□□□□ 0.07
IFT88-205ENST00000470695 CCDC152Q4G0S7 254 aa15.48■□□□□ 0.07
IFT88-205ENST00000470695 CNBD1Q8NA66 436 aa15.48■□□□□ 0.07
IFT88-205ENST00000470695 KIF1BPQ96EK5 621 aa15.48■□□□□ 0.07
IFT88-205ENST00000470695 LRRCC1Q9C099 1032 aa15.48■□□□□ 0.07
IFT88-205ENST00000470695 CHMP3Q9Y3E7 222 aa15.48■□□□□ 0.07
IFT88-205ENST00000470695 DDR1Q08345 913 aa15.47■□□□□ 0.07
IFT88-205ENST00000470695 FAM161AQ3B820 660 aa15.47■□□□□ 0.07
IFT88-205ENST00000470695 NLRP3Q96P20 1036 aa15.47■□□□□ 0.07
IFT88-205ENST00000470695 NRXN2Q9P2S2 1712 aa15.46■□□□□ 0.07
IFT88-205ENST00000470695 ANKRD18BA2A2Z9 1011 aa15.46■□□□□ 0.07
IFT88-205ENST00000470695 CIAO1O76071 339 aa15.46■□□□□ 0.07
IFT88-205ENST00000470695 ITGA6P23229 1130 aa15.46■□□□□ 0.07
IFT88-205ENST00000470695 ST5P78524 1137 aa15.46■□□□□ 0.07
IFT88-205ENST00000470695 PRR5LQ6MZQ0 368 aa15.46■□□□□ 0.07
IFT88-205ENST00000470695 PELP1Q8IZL8 1130 aaKnown RBP15.46■□□□□ 0.07
IFT88-205ENST00000470695 RHPN1Q8TCX5 695 aa15.46■□□□□ 0.07
IFT88-205ENST00000470695 GREM2Q9H772 168 aa15.46■□□□□ 0.07
IFT88-205ENST00000470695 PA2G4Q9UQ80 394 aaKnown RBP15.46■□□□□ 0.07
IFT88-205ENST00000470695 ABCC12Q96J65 1359 aa15.46■□□□□ 0.07
IFT88-205ENST00000470695 NPHP1O15259 732 aa15.45■□□□□ 0.06
IFT88-205ENST00000470695 OS9Q13438 667 aaPredicted RBP15.45■□□□□ 0.06
IFT88-205ENST00000470695 LNPKQ9C0E8 428 aa15.45■□□□□ 0.06
IFT88-205ENST00000470695 PARP3Q9Y6F1 533 aa15.45■□□□□ 0.06
IFT88-205ENST00000470695 EYA2O00167 538 aa15.44■□□□□ 0.06
IFT88-205ENST00000470695 IL15P40933 162 aaPredicted RBP15.44■□□□□ 0.06
IFT88-205ENST00000470695 KLHDC4Q8TBB5 520 aa15.44■□□□□ 0.06
IFT88-205ENST00000470695 SASH1O94885 1247 aa15.43■□□□□ 0.06
IFT88-205ENST00000470695 MMP10P09238 476 aa15.43■□□□□ 0.06
IFT88-205ENST00000470695 PDE4AP27815 886 aa15.43■□□□□ 0.06
IFT88-205ENST00000470695 TAF7LQ5H9L4 462 aa15.43■□□□□ 0.06
IFT88-205ENST00000470695 CDC5LQ99459 802 aaKnown RBP15.43■□□□□ 0.06
IFT88-205ENST00000470695 KLRG2A4D1S0 409 aaPredicted RBP15.42■□□□□ 0.06
IFT88-205ENST00000470695 APBB1O00213 710 aa15.42■□□□□ 0.06
IFT88-205ENST00000470695 C3orf67Q6ZVT6 689 aa15.42■□□□□ 0.06
IFT88-205ENST00000470695 ATG9AQ7Z3C6 839 aa15.42■□□□□ 0.06
IFT88-205ENST00000470695 CCDC85AQ96PX6 553 aaPredicted RBP15.42■□□□□ 0.06
IFT88-205ENST00000470695 SIL1Q9H173 461 aa15.42■□□□□ 0.06
IFT88-205ENST00000470695 LRP5O75197 1615 aa15.42■□□□□ 0.06
IFT88-205ENST00000470695 SMARCA5O60264 1052 aaPredicted RBP15.41■□□□□ 0.06
IFT88-205ENST00000470695 RGS3P49796 1198 aa15.41■□□□□ 0.06
IFT88-205ENST00000470695 CRY2Q49AN0 593 aa15.41■□□□□ 0.06
IFT88-205ENST00000470695 LDHAL6AQ6ZMR3 332 aa15.41■□□□□ 0.06
IFT88-205ENST00000470695 CLASRPQ8N2M8 674 aaKnown RBP15.41■□□□□ 0.06
IFT88-205ENST00000470695 ZNF594Q96JF6 807 aaPredicted RBP15.41■□□□□ 0.06
IFT88-205ENST00000470695 BRIP1Q9BX63 1249 aa15.41■□□□□ 0.06
IFT88-205ENST00000470695 GPR108Q9NPR9 543 aa15.41■□□□□ 0.06
IFT88-205ENST00000470695 RIPOR2Q9Y4F9 1068 aa15.41■□□□□ 0.06
IFT88-205ENST00000470695 CASZ1Q86V15 1759 aa15.4■□□□□ 0.06
IFT88-205ENST00000470695 IGHMBP2P38935 993 aaKnown RBP15.4■□□□□ 0.06
IFT88-205ENST00000470695 MSL1Q68DK7 614 aa15.4■□□□□ 0.06
IFT88-205ENST00000470695 SEC31BQ9NQW1 1179 aa15.4■□□□□ 0.06
IFT88-205ENST00000470695 TNRC6CQ9HCJ0 1690 aaKnown RBP15.4■□□□□ 0.06
IFT88-205ENST00000470695 SALL3Q9BXA9 1300 aa15.4■□□□□ 0.06
IFT88-205ENST00000470695 LRRC24Q50LG9 513 aa15.39■□□□□ 0.05
IFT88-205ENST00000470695 DDX46Q7L014 1031 aaKnown RBP15.39■□□□□ 0.05
IFT88-205ENST00000470695 SKAP1Q86WV1 359 aa15.39■□□□□ 0.05
IFT88-205ENST00000470695 ANKRD18AQ8IVF6 992 aa15.39■□□□□ 0.05
IFT88-205ENST00000470695 PLEKHM2Q8IWE5 1019 aa15.39■□□□□ 0.05
IFT88-205ENST00000470695 CCDC24Q8N4L8 307 aa15.39■□□□□ 0.05
IFT88-205ENST00000470695 MPHOSPH8Q99549 860 aa15.39■□□□□ 0.05
IFT88-205ENST00000470695 PUS3Q9BZE2 481 aaKnown RBP15.39■□□□□ 0.05
IFT88-205ENST00000470695 OSBPL3Q9H4L5 887 aa15.39■□□□□ 0.05
IFT88-205ENST00000470695 IL1RAPL2Q9NP60 686 aa15.39■□□□□ 0.05
IFT88-205ENST00000470695 CNNM1Q9NRU3 951 aa15.39■□□□□ 0.05
IFT88-205ENST00000470695 CEP126Q9P2H0 1117 aa15.39■□□□□ 0.05
IFT88-205ENST00000470695 MROH5Q6ZUA9 1318 aa15.39■□□□□ 0.05
IFT88-205ENST00000470695 HOXA10P31260 410 aaPredicted RBP15.38■□□□□ 0.05
IFT88-205ENST00000470695 PDE6BP35913 854 aa15.38■□□□□ 0.05
IFT88-205ENST00000470695 TFCP2Q12800 502 aa15.38■□□□□ 0.05
IFT88-205ENST00000470695 ILDR2Q71H61 639 aa15.38■□□□□ 0.05
IFT88-205ENST00000470695 C16orf71Q8IYS4 520 aaPredicted RBP15.38■□□□□ 0.05
IFT88-205ENST00000470695 PDGFDQ9GZP0 370 aaPredicted RBP15.38■□□□□ 0.05
IFT88-205ENST00000470695 BSDC1Q9NW68 430 aaPredicted RBP15.38■□□□□ 0.05
IFT88-205ENST00000470695 STAP2Q9UGK3 403 aa15.38■□□□□ 0.05
IFT88-205ENST00000470695 AOX1Q06278 1338 aa15.38■□□□□ 0.05
IFT88-205ENST00000470695 RPS8P62241 208 aaKnown RBP15.37■□□□□ 0.05
IFT88-205ENST00000470695 TNNI3KQ59H18 835 aa15.37■□□□□ 0.05
IFT88-205ENST00000470695 RPGRQ92834 1020 aaKnown RBP15.37■□□□□ 0.05
IFT88-205ENST00000470695 EAF2Q96CJ1 260 aaPredicted RBP15.37■□□□□ 0.05
IFT88-205ENST00000470695 RBM17Q96I25 401 aaKnown RBP15.37■□□□□ 0.05
IFT88-205ENST00000470695 CRAMP1Q96RY5 1269 aa15.37■□□□□ 0.05
IFT88-205ENST00000470695 MTFR1LQ9H019 292 aa15.37■□□□□ 0.05
IFT88-205ENST00000470695 AKAP2Q9Y2D5 859 aa15.37■□□□□ 0.05
IFT88-205ENST00000470695 FPGT-TNNI3KV9GXZ4 949 aa15.37■□□□□ 0.05
IFT88-205ENST00000470695 ANKRD31Q8N7Z5 1873 aa15.36■□□□□ 0.05
IFT88-205ENST00000470695 IFIT2P09913 472 aaKnown RBP15.36■□□□□ 0.05
IFT88-205ENST00000470695 MX1P20591 662 aa15.36■□□□□ 0.05
IFT88-205ENST00000470695 PDE1AP54750 535 aa15.36■□□□□ 0.05
IFT88-205ENST00000470695 GRAPQ13588 217 aa15.36■□□□□ 0.05
IFT88-205ENST00000470695 GRAPLQ8TC17 118 aaPredicted RBP15.36■□□□□ 0.05
IFT88-205ENST00000470695 TTC41PQ6P2S7 1318 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms