RNA–Protein interactions for RNA: ENST00000470668.5

HDAC7-219, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 4,266 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-219ENST00000470668 TRIM35Q9UPQ4 493 aa16.36■□□□□ 0.21
HDAC7-219ENST00000470668 MCM3P25205 808 aa16.36■□□□□ 0.21
HDAC7-219ENST00000470668 SPA17Q15506 151 aa16.36■□□□□ 0.21
HDAC7-219ENST00000470668 Q6ZUG5 572 aa16.36■□□□□ 0.21
HDAC7-219ENST00000470668 HLTFQ14527 1009 aaKnown RBP eCLIP16.36■□□□□ 0.21
HDAC7-219ENST00000470668 KIAA1524Q8TCG1 905 aa16.36■□□□□ 0.21
HDAC7-219ENST00000470668 CCDC113Q9H0I3 377 aa16.36■□□□□ 0.21
HDAC7-219ENST00000470668 CEP126Q9P2H0 1117 aa16.36■□□□□ 0.21
HDAC7-219ENST00000470668 COL17A1Q9UMD9 1497 aaPredicted RBP16.36■□□□□ 0.21
HDAC7-219ENST00000470668 IDH1O75874 414 aaKnown RBP16.36■□□□□ 0.21
HDAC7-219ENST00000470668 PAFAH1B1P43034 410 aa16.36■□□□□ 0.21
HDAC7-219ENST00000470668 MPRIPQ6WCQ1 1025 aa16.36■□□□□ 0.21
HDAC7-219ENST00000470668 TRMT2AQ8IZ69 625 aaKnown RBP16.36■□□□□ 0.21
HDAC7-219ENST00000470668 ATRIPQ8WXE1 791 aa16.36■□□□□ 0.21
HDAC7-219ENST00000470668 DENND4BO75064 1496 aaPredicted RBP16.36■□□□□ 0.21
HDAC7-219ENST00000470668 DDX46Q7L014 1031 aaKnown RBP16.35■□□□□ 0.21
HDAC7-219ENST00000470668 CHST3Q7LGC8 479 aa16.35■□□□□ 0.21
HDAC7-219ENST00000470668 ACEP12821 1306 aa16.35■□□□□ 0.21
HDAC7-219ENST00000470668 N4BP3O15049 544 aa16.35■□□□□ 0.21
HDAC7-219ENST00000470668 NUP160Q12769 1436 aa16.35■□□□□ 0.21
HDAC7-219ENST00000470668 ZNF521Q96K83 1311 aa16.35■□□□□ 0.21
HDAC7-219ENST00000470668 ZBTB22O15209 634 aa16.35■□□□□ 0.21
HDAC7-219ENST00000470668 ZEB2O60315 1214 aa16.35■□□□□ 0.21
HDAC7-219ENST00000470668 ERLIN2O94905 339 aa16.35■□□□□ 0.21
HDAC7-219ENST00000470668 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.35■□□□□ 0.21
HDAC7-219ENST00000470668 HMGB1P09429 215 aaKnown RBP16.34■□□□□ 0.21
HDAC7-219ENST00000470668 ZNF569Q5MCW4 686 aa16.34■□□□□ 0.21
HDAC7-219ENST00000470668 NBPF11Q86T75 865 aa16.34■□□□□ 0.21
HDAC7-219ENST00000470668 MYO6Q9UM54 1294 aa16.34■□□□□ 0.21
HDAC7-219ENST00000470668 PA2G4Q9UQ80 394 aaKnown RBP16.34■□□□□ 0.21
HDAC7-219ENST00000470668 UHRF1BP1Q6BDS2 1440 aa16.34■□□□□ 0.21
HDAC7-219ENST00000470668 NAA30Q147X3 362 aaPredicted RBP16.34■□□□□ 0.21
HDAC7-219ENST00000470668 ZFYVE27Q5T4F4 411 aa16.34■□□□□ 0.21
HDAC7-219ENST00000470668 MICALCLQ6ZW33 695 aa16.34■□□□□ 0.21
HDAC7-219ENST00000470668 RTL1A6NKG5 1358 aa16.34■□□□□ 0.21
HDAC7-219ENST00000470668 YEATS4O95619 227 aa16.34■□□□□ 0.21
HDAC7-219ENST00000470668 CCDC175P0C221 793 aa16.34■□□□□ 0.21
HDAC7-219ENST00000470668 CREB3L3Q68CJ9 461 aa16.34■□□□□ 0.21
HDAC7-219ENST00000470668 MICU3Q86XE3 530 aa16.34■□□□□ 0.21
HDAC7-219ENST00000470668 LUC7LQ9NQ29 371 aaKnown RBP16.34■□□□□ 0.21
HDAC7-219ENST00000470668 SNX14Q9Y5W7 946 aa16.34■□□□□ 0.21
HDAC7-219ENST00000470668 GOLIM4O00461 696 aa16.33■□□□□ 0.21
HDAC7-219ENST00000470668 SPECC1Q5M775 1068 aa16.33■□□□□ 0.21
HDAC7-219ENST00000470668 SNRKQ9NRH2 765 aa16.33■□□□□ 0.21
HDAC7-219ENST00000470668 NF2P35240 595 aa16.33■□□□□ 0.21
HDAC7-219ENST00000470668 ZHX3Q9H4I2 956 aa16.33■□□□□ 0.21
HDAC7-219ENST00000470668 SMC1AQ14683 1233 aaKnown RBP16.33■□□□□ 0.2
HDAC7-219ENST00000470668 CDC37L1Q7L3B6 337 aa16.33■□□□□ 0.2
HDAC7-219ENST00000470668 CAPZA3Q96KX2 299 aa16.33■□□□□ 0.2
HDAC7-219ENST00000470668 ANKRD36BQ8N2N9 1353 aa16.33■□□□□ 0.2
HDAC7-219ENST00000470668 NMIQ13287 307 aaPredicted RBP16.33■□□□□ 0.2
HDAC7-219ENST00000470668 MAATS1Q7Z4T9 603 aa16.33■□□□□ 0.2
HDAC7-219ENST00000470668 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.33■□□□□ 0.23e-7■■■■□ 23
HDAC7-219ENST00000470668 CLSTN2Q9H4D0 955 aa16.33■□□□□ 0.2
HDAC7-219ENST00000470668 G2E3Q7L622 706 aa16.32■□□□□ 0.2
HDAC7-219ENST00000470668 LEO1Q8WVC0 666 aaPredicted RBP16.32■□□□□ 0.2
HDAC7-219ENST00000470668 CDK5RAP3Q96JB5 506 aa16.32■□□□□ 0.2
HDAC7-219ENST00000470668 PBRM1Q86U86 1689 aa16.32■□□□□ 0.2
HDAC7-219ENST00000470668 WDHD1O75717 1129 aaPredicted RBP16.32■□□□□ 0.2
HDAC7-219ENST00000470668 IFIT1P09914 478 aaKnown RBP16.32■□□□□ 0.2
HDAC7-219ENST00000470668 GBP2P32456 591 aaPredicted RBP16.32■□□□□ 0.2
HDAC7-219ENST00000470668 OTUD6BQ8N6M0 293 aa16.32■□□□□ 0.2
HDAC7-219ENST00000470668 TAF4BQ92750 862 aa16.32■□□□□ 0.2
HDAC7-219ENST00000470668 IBTKQ9P2D0 1353 aaPredicted RBP16.32■□□□□ 0.2
HDAC7-219ENST00000470668 ARHGEF12Q9NZN5 1544 aa16.32■□□□□ 0.2
HDAC7-219ENST00000470668 SPTLC2O15270 562 aa16.32■□□□□ 0.2
HDAC7-219ENST00000470668 TUBB4AP04350 444 aa16.32■□□□□ 0.2
HDAC7-219ENST00000470668 CNNM1Q9NRU3 951 aa16.32■□□□□ 0.2
HDAC7-219ENST00000470668 CTAGE9A4FU28 777 aa16.31■□□□□ 0.2
HDAC7-219ENST00000470668 STX17P56962 302 aa16.31■□□□□ 0.2
HDAC7-219ENST00000470668 RUFY3Q7L099 469 aa16.31■□□□□ 0.2
HDAC7-219ENST00000470668 CEP112Q8N8E3 955 aa16.31■□□□□ 0.2
HDAC7-219ENST00000470668 HMG20BQ9P0W2 317 aa16.31■□□□□ 0.2
HDAC7-219ENST00000470668 A0A1W2PP64 1363 aa16.31■□□□□ 0.2
HDAC7-219ENST00000470668 AFMP43652 599 aa16.31■□□□□ 0.2
HDAC7-219ENST00000470668 KCNG4Q8TDN1 519 aa16.31■□□□□ 0.2
HDAC7-219ENST00000470668 ADGRL2O95490 1459 aa16.31■□□□□ 0.2
HDAC7-219ENST00000470668 ABCC10Q5T3U5 1492 aa16.31■□□□□ 0.2
HDAC7-219ENST00000470668 PPARDQ03181 441 aa16.31■□□□□ 0.2
HDAC7-219ENST00000470668 HDXQ7Z353 690 aa16.31■□□□□ 0.2
HDAC7-219ENST00000470668 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.31■□□□□ 0.28e-7■■■□□ 17.2
HDAC7-219ENST00000470668 KLF18A0A0U1RQI7 1052 aa16.3■□□□□ 0.2
HDAC7-219ENST00000470668 SSBP05455 408 aaKnown RBP eCLIP16.3■□□□□ 0.2
HDAC7-219ENST00000470668 NEFHP12036 1026 aa16.3■□□□□ 0.2
HDAC7-219ENST00000470668 UBAC1Q9BSL1 405 aa16.3■□□□□ 0.2
HDAC7-219ENST00000470668 SHANK2Q9UPX8 1470 aa16.3■□□□□ 0.2
HDAC7-219ENST00000470668 NSD2O96028 1365 aa16.3■□□□□ 0.2
HDAC7-219ENST00000470668 TDO2P48775 406 aa16.3■□□□□ 0.2
HDAC7-219ENST00000470668 DYDC1Q8WWB3 177 aa16.3■□□□□ 0.2
HDAC7-219ENST00000470668 BAG1Q99933 345 aaPredicted RBP16.3■□□□□ 0.2
HDAC7-219ENST00000470668 GUCA1BQ9UMX6 200 aa16.3■□□□□ 0.2
HDAC7-219ENST00000470668 IFFO1Q0D2I5 559 aa16.3■□□□□ 0.2
HDAC7-219ENST00000470668 CACTINQ8WUQ7 758 aaKnown RBP16.3■□□□□ 0.2
HDAC7-219ENST00000470668 APOBRQ0VD83 1088 aa16.29■□□□□ 0.2
HDAC7-219ENST00000470668 CCDC57Q2TAC2 916 aa16.29■□□□□ 0.2
HDAC7-219ENST00000470668 FKBP15Q5T1M5 1219 aa16.29■□□□□ 0.2
HDAC7-219ENST00000470668 MSH6P52701 1360 aa16.29■□□□□ 0.2
HDAC7-219ENST00000470668 TDRD12Q587J7 1177 aaKnown RBP16.29■□□□□ 0.2
HDAC7-219ENST00000470668 GBP6Q6ZN66 633 aa16.29■□□□□ 0.2
HDAC7-219ENST00000470668 TTC6Q86TZ1 520 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms