RNA–Protein interactions for RNA: ENST00000470642.1

SUN2-215, Transcript of Sad1 and UNC84 domain containing 2, human

TSL 3

Gene SUN2, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUN2-215	ENST00000470642	METTL22	Q9BUU2	404 aa	Predicted RBP	11.47	□□□□□ -0.57
SUN2-215	ENST00000470642	SMC4	Q9NTJ3	1288 aa		11.47	□□□□□ -0.57
SUN2-215	ENST00000470642	PTPRC	P08575	1304 aa		11.46	□□□□□ -0.57
SUN2-215	ENST00000470642	ATP5J2-PTCD1	G3V325	749 aa		11.46	□□□□□ -0.57
SUN2-215	ENST00000470642	HSPA8	P11142	646 aa	Known RBP	11.46	□□□□□ -0.57
SUN2-215	ENST00000470642	G2E3	Q7L622	706 aa		11.46	□□□□□ -0.57
SUN2-215	ENST00000470642	SYNE4	Q8N205	404 aa		11.46	□□□□□ -0.57
SUN2-215	ENST00000470642	CCDC191	Q8NCU4	936 aa		11.46	□□□□□ -0.57
SUN2-215	ENST00000470642	ISCA1	Q9BUE6	129 aa		11.46	□□□□□ -0.57
SUN2-215	ENST00000470642	WBP1L	Q9NX94	342 aa		11.46	□□□□□ -0.57
SUN2-215	ENST00000470642	CWC25	Q9NXE8	425 aa	Predicted RBP	11.46	□□□□□ -0.57
SUN2-215	ENST00000470642	CACNA1F	O60840	1977 aa		11.46	□□□□□ -0.58
SUN2-215	ENST00000470642	SH3TC1	Q8TE82	1336 aa		11.45	□□□□□ -0.58
SUN2-215	ENST00000470642	POTEC	B2RU33	542 aa		11.45	□□□□□ -0.58
SUN2-215	ENST00000470642	VEGFB	P49765	207 aa		11.45	□□□□□ -0.58
SUN2-215	ENST00000470642	MRPL50	Q8N5N7	158 aa	Known RBP	11.45	□□□□□ -0.58
SUN2-215	ENST00000470642	DNAAF4	Q8WXU2	420 aa		11.45	□□□□□ -0.58
SUN2-215	ENST00000470642	SSH1	Q8WYL5	1049 aa		11.45	□□□□□ -0.58
SUN2-215	ENST00000470642	NLRP3	Q96P20	1036 aa		11.45	□□□□□ -0.58
SUN2-215	ENST00000470642	COL4A1	P02462	1669 aa		11.44	□□□□□ -0.58
SUN2-215	ENST00000470642	COL4A5	P29400	1685 aa		11.44	□□□□□ -0.58
SUN2-215	ENST00000470642	ALDH1B1	P30837	517 aa		11.44	□□□□□ -0.58
SUN2-215	ENST00000470642	HOXA10	P31260	410 aa	Predicted RBP	11.44	□□□□□ -0.58
SUN2-215	ENST00000470642	SLC10A5	Q5PT55	438 aa		11.44	□□□□□ -0.58
SUN2-215	ENST00000470642	CHADL	Q6NUI6	762 aa		11.44	□□□□□ -0.58
SUN2-215	ENST00000470642	RPGR	Q92834	1020 aa	Known RBP	11.44	□□□□□ -0.58
SUN2-215	ENST00000470642	TAOK3	Q9H2K8	898 aa		11.44	□□□□□ -0.58
SUN2-215	ENST00000470642	KIF16B	Q96L93	1317 aa		11.43	□□□□□ -0.58
SUN2-215	ENST00000470642	IPO8	O15397	1037 aa	Known RBP	11.43	□□□□□ -0.58
SUN2-215	ENST00000470642	CCDC93	Q567U6	631 aa		11.43	□□□□□ -0.58
SUN2-215	ENST00000470642	SLC4A10	Q6U841	1118 aa		11.43	□□□□□ -0.58
SUN2-215	ENST00000470642	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.43	□□□□□ -0.58
SUN2-215	ENST00000470642	LINS1	Q8NG48	757 aa		11.43	□□□□□ -0.58
SUN2-215	ENST00000470642	BCL2L13	Q9BXK5	485 aa		11.43	□□□□□ -0.58
SUN2-215	ENST00000470642	TMX4	Q9H1E5	349 aa	Predicted RBP	11.43	□□□□□ -0.58
SUN2-215	ENST00000470642	HCLS1	P14317	486 aa	Predicted RBP	11.42	□□□□□ -0.58
SUN2-215	ENST00000470642	RARS	P54136	660 aa	Known RBP	11.42	□□□□□ -0.58
SUN2-215	ENST00000470642	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
SUN2-215	ENST00000470642	SOGA3	Q5TF21	947 aa		11.42	□□□□□ -0.58
SUN2-215	ENST00000470642	FAM89A	Q96GI7	184 aa		11.42	□□□□□ -0.58
SUN2-215	ENST00000470642	RBM17	Q96I25	401 aa	Known RBP	11.42	□□□□□ -0.58
SUN2-215	ENST00000470642	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.42	□□□□□ -0.58
SUN2-215	ENST00000470642	TNRC18	O15417	2968 aa	Predicted RBP	11.42	□□□□□ -0.58
SUN2-215	ENST00000470642	NEURL1B	A8MQ27	555 aa		11.41	□□□□□ -0.58
SUN2-215	ENST00000470642	IRS4	O14654	1257 aa	Predicted RBP	11.41	□□□□□ -0.58
SUN2-215	ENST00000470642	PCCA	P05165	728 aa	Predicted RBP	11.41	□□□□□ -0.58
SUN2-215	ENST00000470642	RTL5	Q5HYW3	569 aa	Predicted RBP	11.41	□□□□□ -0.58
SUN2-215	ENST00000470642	YTHDC1	Q96MU7	727 aa	Known RBP	11.41	□□□□□ -0.58
SUN2-215	ENST00000470642	CRAMP1	Q96RY5	1269 aa		11.41	□□□□□ -0.58
SUN2-215	ENST00000470642	API5	Q9BZZ5	524 aa	Known RBP	11.41	□□□□□ -0.58
SUN2-215	ENST00000470642	SRCIN1	Q9C0H9	1055 aa		11.41	□□□□□ -0.58
SUN2-215	ENST00000470642	ABCC4	O15439	1325 aa		11.4	□□□□□ -0.58
SUN2-215	ENST00000470642	SCN4A	P35499	1836 aa		11.4	□□□□□ -0.58
SUN2-215	ENST00000470642		F6X3S4	739 aa		11.4	□□□□□ -0.58
SUN2-215	ENST00000470642	DDN	O94850	711 aa	Predicted RBP	11.4	□□□□□ -0.58
SUN2-215	ENST00000470642	IGKV5-2	P06315	115 aa		11.4	□□□□□ -0.58
SUN2-215	ENST00000470642	POTEI	P0CG38	1075 aa		11.4	□□□□□ -0.58
SUN2-215	ENST00000470642	POTEJ	P0CG39	1038 aa		11.4	□□□□□ -0.58
SUN2-215	ENST00000470642	BRPF1	P55201	1214 aa	Predicted RBP	11.4	□□□□□ -0.58
SUN2-215	ENST00000470642	CWF19L2	Q2TBE0	894 aa	Known RBP	11.4	□□□□□ -0.58
SUN2-215	ENST00000470642	DDX46	Q7L014	1031 aa	Known RBP	11.4	□□□□□ -0.58
SUN2-215	ENST00000470642	C9orf78	Q9NZ63	289 aa	Predicted RBP	11.4	□□□□□ -0.58
SUN2-215	ENST00000470642	NOB1	Q9ULX3	412 aa	Known RBP	11.4	□□□□□ -0.58
SUN2-215	ENST00000470642	LRRC37A	A6NMS7	1700 aa		11.4	□□□□□ -0.58
SUN2-215	ENST00000470642	ZNF541	Q9H0D2	1346 aa		11.39	□□□□□ -0.59
SUN2-215	ENST00000470642	PDE8A	O60658	829 aa		11.39	□□□□□ -0.59
SUN2-215	ENST00000470642	ALDH1L1	O75891	902 aa		11.39	□□□□□ -0.59
SUN2-215	ENST00000470642	MAP2K1	Q02750	393 aa	Predicted RBP	11.39	□□□□□ -0.59
SUN2-215	ENST00000470642	GCKR	Q14397	625 aa		11.39	□□□□□ -0.59
SUN2-215	ENST00000470642	BEND3	Q5T5X7	828 aa		11.39	□□□□□ -0.59
SUN2-215	ENST00000470642	DPY19L2	Q6NUT2	758 aa		11.39	□□□□□ -0.59
SUN2-215	ENST00000470642	RTKN2	Q8IZC4	609 aa		11.39	□□□□□ -0.59
SUN2-215	ENST00000470642	ARHGAP45	Q92619	1136 aa		11.39	□□□□□ -0.59
SUN2-215	ENST00000470642	FRAT1	Q92837	279 aa	Predicted RBP	11.39	□□□□□ -0.59
SUN2-215	ENST00000470642	PSMD1	Q99460	953 aa		11.39	□□□□□ -0.59
SUN2-215	ENST00000470642	PASK	Q96RG2	1323 aa		11.38	□□□□□ -0.59
SUN2-215	ENST00000470642	CDHR2	Q9BYE9	1310 aa		11.38	□□□□□ -0.59
SUN2-215	ENST00000470642	LTBP1	Q14766	1721 aa		11.38	□□□□□ -0.59
SUN2-215	ENST00000470642	DUOX1	Q9NRD9	1551 aa		11.38	□□□□□ -0.59
SUN2-215	ENST00000470642	TMEM88B	A6NKF7	163 aa		11.38	□□□□□ -0.59
SUN2-215	ENST00000470642	PPEF1	O14829	653 aa	Predicted RBP	11.38	□□□□□ -0.59
SUN2-215	ENST00000470642	IARS	P41252	1262 aa	Known RBP	11.38	□□□□□ -0.59
SUN2-215	ENST00000470642	CCT4	P50991	539 aa	Known RBP	11.38	□□□□□ -0.59
SUN2-215	ENST00000470642	CCDC152	Q4G0S7	254 aa		11.38	□□□□□ -0.59
SUN2-215	ENST00000470642	UBE3B	Q7Z3V4	1068 aa		11.38	□□□□□ -0.59
SUN2-215	ENST00000470642	ADAMTSL1	Q8N6G6	1762 aa		11.37	□□□□□ -0.59
SUN2-215	ENST00000470642		H7C1W4	665 aa		11.37	□□□□□ -0.59
SUN2-215	ENST00000470642	FZD9	O00144	591 aa		11.37	□□□□□ -0.59
SUN2-215	ENST00000470642	GRM8	O00222	908 aa		11.37	□□□□□ -0.59
SUN2-215	ENST00000470642	BBOX1	O75936	387 aa		11.37	□□□□□ -0.59
SUN2-215	ENST00000470642	SF3B3	Q15393	1217 aa	Known RBP	11.37	□□□□□ -0.59
SUN2-215	ENST00000470642	GRIPAP1	Q4V328	841 aa		11.37	□□□□□ -0.59
SUN2-215	ENST00000470642	CC2D2B	Q6DHV5	1058 aa		11.37	□□□□□ -0.59
SUN2-215	ENST00000470642	TMC4	Q7Z404	712 aa		11.37	□□□□□ -0.59
SUN2-215	ENST00000470642	HDAC5	Q9UQL6	1122 aa		11.37	□□□□□ -0.59
SUN2-215	ENST00000470642	THSD7B	Q9C0I4	1608 aa		11.37	□□□□□ -0.59
SUN2-215	ENST00000470642	MYH3	P11055	1940 aa		11.37	□□□□□ -0.59
SUN2-215	ENST00000470642	BCAR3	O75815	825 aa		11.36	□□□□□ -0.59
SUN2-215	ENST00000470642	MS4A1	P11836	297 aa		11.36	□□□□□ -0.59
SUN2-215	ENST00000470642	ZKSCAN2	Q63HK3	967 aa		11.36	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms