RNA–Protein interactions for RNA: ENST00000470578.1

PKDCC-203, Transcript of protein kinase domain containing, cytoplasmic, humanhuman

TSL 3

Gene PKDCC, Length 765 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKDCC-203ENST00000470578 COL4A1P02462 1669 aa20.75■□□□□ 0.91
PKDCC-203ENST00000470578 SF3B3Q15393 1217 aaKnown RBP20.75■□□□□ 0.91
PKDCC-203ENST00000470578 ZNF277Q9NRM2 450 aaPredicted RBP20.75■□□□□ 0.91
PKDCC-203ENST00000470578 PDE8AO60658 829 aa20.74■□□□□ 0.91
PKDCC-203ENST00000470578 UBE3BQ7Z3V4 1068 aa20.74■□□□□ 0.91
PKDCC-203ENST00000470578 TRMT2AQ8IZ69 625 aaKnown RBP20.74■□□□□ 0.91
PKDCC-203ENST00000470578 LINS1Q8NG48 757 aa20.74■□□□□ 0.91
PKDCC-203ENST00000470578 BCL2L13Q9BXK5 485 aa20.74■□□□□ 0.91
PKDCC-203ENST00000470578 NMRK2Q9NPI5 230 aa20.74■□□□□ 0.91
PKDCC-203ENST00000470578 ATP6V0A2Q9Y487 856 aa20.74■□□□□ 0.91
PKDCC-203ENST00000470578 KDM2BQ8NHM5 1336 aa20.74■□□□□ 0.91
PKDCC-203ENST00000470578 BBOX1O75936 387 aa20.73■□□□□ 0.91
PKDCC-203ENST00000470578 GCKRQ14397 625 aa20.73■□□□□ 0.91
PKDCC-203ENST00000470578 GRIPAP1Q4V328 841 aa20.73■□□□□ 0.91
PKDCC-203ENST00000470578 PSMD1Q99460 953 aa20.73■□□□□ 0.91
PKDCC-203ENST00000470578 CCDC152Q4G0S7 254 aa20.72■□□□□ 0.91
PKDCC-203ENST00000470578 MRPL50Q8N5N7 158 aaKnown RBP20.72■□□□□ 0.91
PKDCC-203ENST00000470578 SSH1Q8WYL5 1049 aa20.72■□□□□ 0.91
PKDCC-203ENST00000470578 IARSP41252 1262 aaKnown RBP20.71■□□□□ 0.91
PKDCC-203ENST00000470578 SLC4A10Q6U841 1118 aa20.71■□□□□ 0.91
PKDCC-203ENST00000470578 TMC4Q7Z404 712 aa20.71■□□□□ 0.91
PKDCC-203ENST00000470578 CELF1Q92879 486 aaKnown RBP20.71■□□□□ 0.91
PKDCC-203ENST00000470578 CCDC85AQ96PX6 553 aaPredicted RBP20.71■□□□□ 0.91
PKDCC-203ENST00000470578 SMC4Q9NTJ3 1288 aa20.71■□□□□ 0.91
PKDCC-203ENST00000470578 CT47B1P0C2W7 299 aaPredicted RBP20.7■□□□□ 0.9
PKDCC-203ENST00000470578 CTSWP56202 376 aa20.7■□□□□ 0.9
PKDCC-203ENST00000470578 ALDH1L2Q3SY69 923 aa20.7■□□□□ 0.9
PKDCC-203ENST00000470578 BEND3Q5T5X7 828 aa20.7■□□□□ 0.9
PKDCC-203ENST00000470578 RRAGCQ9HB90 399 aa20.7■□□□□ 0.9
PKDCC-203ENST00000470578 PTPRCP08575 1304 aa20.7■□□□□ 0.9
PKDCC-203ENST00000470578 DUOX1Q9NRD9 1551 aa20.69■□□□□ 0.9
PKDCC-203ENST00000470578 SP8Q8IXZ3 490 aa20.69■□□□□ 0.9
PKDCC-203ENST00000470578 LTBP1Q14766 1721 aa20.69■□□□□ 0.9
PKDCC-203ENST00000470578 WDR90Q96KV7 1748 aa20.69■□□□□ 0.9
PKDCC-203ENST00000470578 COL4A5P29400 1685 aa20.68■□□□□ 0.9
PKDCC-203ENST00000470578 GLTPD2A6NH11 291 aa20.68■□□□□ 0.9
PKDCC-203ENST00000470578 H7C1W4 665 aa20.68■□□□□ 0.9
PKDCC-203ENST00000470578 TOMM70O94826 608 aa20.68■□□□□ 0.9
PKDCC-203ENST00000470578 HSPA6P17066 643 aa20.68■□□□□ 0.9
PKDCC-203ENST00000470578 DPP8Q6V1X1 898 aaPredicted RBP20.68■□□□□ 0.9
PKDCC-203ENST00000470578 SEC31BQ9NQW1 1179 aa20.68■□□□□ 0.9
PKDCC-203ENST00000470578 DPY19L2Q6NUT2 758 aa20.67■□□□□ 0.9
PKDCC-203ENST00000470578 MPNDQ8N594 471 aa20.67■□□□□ 0.9
PKDCC-203ENST00000470578 RPS8P62241 208 aaKnown RBP20.66■□□□□ 0.9
PKDCC-203ENST00000470578 LARGE2Q8N3Y3 721 aa20.66■□□□□ 0.9
PKDCC-203ENST00000470578 SUPT20HQ8NEM7 779 aa20.66■□□□□ 0.9
PKDCC-203ENST00000470578 JDP2Q8WYK2 163 aa20.66■□□□□ 0.9
PKDCC-203ENST00000470578 SRCIN1Q9C0H9 1055 aa20.66■□□□□ 0.9
PKDCC-203ENST00000470578 ZBED9Q6R2W3 1325 aa20.65■□□□□ 0.9
PKDCC-203ENST00000470578 PPIP5K2O43314 1243 aa20.65■□□□□ 0.9
PKDCC-203ENST00000470578 ALDH1L1O75891 902 aa20.65■□□□□ 0.9
PKDCC-203ENST00000470578 CASP7P55210 303 aa20.65■□□□□ 0.9
PKDCC-203ENST00000470578 TTLL11Q8NHH1 800 aa20.65■□□□□ 0.9
PKDCC-203ENST00000470578 RTL9Q8NET4 1388 aa20.64■□□□□ 0.89
PKDCC-203ENST00000470578 ZNF541Q9H0D2 1346 aa20.64■□□□□ 0.89
PKDCC-203ENST00000470578 GRM8O00222 908 aa20.64■□□□□ 0.89
PKDCC-203ENST00000470578 ANKRD18AQ8IVF6 992 aa20.64■□□□□ 0.89
PKDCC-203ENST00000470578 C16orf71Q8IYS4 520 aaPredicted RBP20.64■□□□□ 0.89
PKDCC-203ENST00000470578 CDC5LQ99459 802 aaKnown RBP20.64■□□□□ 0.89
PKDCC-203ENST00000470578 PLA2G12BQ9BX93 195 aa20.64■□□□□ 0.89
PKDCC-203ENST00000470578 GREM2Q9H772 168 aa20.64■□□□□ 0.89
PKDCC-203ENST00000470578 C9orf78Q9NZ63 289 aaPredicted RBP20.64■□□□□ 0.89
PKDCC-203ENST00000470578 AOC3Q16853 763 aa20.63■□□□□ 0.89
PKDCC-203ENST00000470578 NIM1KQ8IY84 436 aa20.63■□□□□ 0.89
PKDCC-203ENST00000470578 RTFDC1Q9BY42 306 aaPredicted RBP20.63■□□□□ 0.89
PKDCC-203ENST00000470578 SCN4AP35499 1836 aa20.62■□□□□ 0.89
PKDCC-203ENST00000470578 FAM161AQ3B820 660 aa20.62■□□□□ 0.89
PKDCC-203ENST00000470578 NSFL1CQ9UNZ2 370 aaKnown RBP20.62■□□□□ 0.89
PKDCC-203ENST00000470578 DDNO94850 711 aaPredicted RBP20.61■□□□□ 0.89
PKDCC-203ENST00000470578 RARSP54136 660 aaKnown RBP20.61■□□□□ 0.89
PKDCC-203ENST00000470578 RBM46Q8TBY0 533 aaKnown RBP20.61■□□□□ 0.89
PKDCC-203ENST00000470578 CHMP3Q9Y3E7 222 aa20.61■□□□□ 0.89
PKDCC-203ENST00000470578 KIF16BQ96L93 1317 aa20.6■□□□□ 0.89
PKDCC-203ENST00000470578 A0A1B0GUL6 1792 aa20.6■□□□□ 0.89
PKDCC-203ENST00000470578 FZD9O00144 591 aa20.6■□□□□ 0.89
PKDCC-203ENST00000470578 GPSM2P81274 684 aa20.6■□□□□ 0.89
PKDCC-203ENST00000470578 VPS33BQ9H267 617 aa20.6■□□□□ 0.89
PKDCC-203ENST00000470578 ANKIB1Q9P2G1 1089 aa20.6■□□□□ 0.89
PKDCC-203ENST00000470578 C6orf229H3BNL8 230 aa20.59■□□□□ 0.89
PKDCC-203ENST00000470578 VEGFAP15692 232 aaPredicted RBP20.59■□□□□ 0.89
PKDCC-203ENST00000470578 ITGA6P23229 1130 aa20.59■□□□□ 0.89
PKDCC-203ENST00000470578 EIF6P56537 245 aaKnown RBP20.59■□□□□ 0.89
PKDCC-203ENST00000470578 NOB1Q9ULX3 412 aaKnown RBP20.59■□□□□ 0.89
PKDCC-203ENST00000470578 IGHMBP2P38935 993 aaKnown RBP20.58■□□□□ 0.89
PKDCC-203ENST00000470578 KIAA2012Q0VF49 1180 aa20.58■□□□□ 0.89
PKDCC-203ENST00000470578 UFL1O94874 794 aa20.57■□□□□ 0.88
PKDCC-203ENST00000470578 CSF1RP07333 972 aa20.57■□□□□ 0.88
PKDCC-203ENST00000470578 BRPF1P55201 1214 aaPredicted RBP20.57■□□□□ 0.88
PKDCC-203ENST00000470578 EYA3Q99504 573 aa20.57■□□□□ 0.88
PKDCC-203ENST00000470578 API5Q9BZZ5 524 aaKnown RBP20.57■□□□□ 0.88
PKDCC-203ENST00000470578 XDHP47989 1333 aa20.56■□□□□ 0.88
PKDCC-203ENST00000470578 ANKRD18BA2A2Z9 1011 aa20.56■□□□□ 0.88
PKDCC-203ENST00000470578 POTECB2RU33 542 aa20.56■□□□□ 0.88
PKDCC-203ENST00000470578 NBPF7P0C2Y1 421 aaPredicted RBP20.56■□□□□ 0.88
PKDCC-203ENST00000470578 FOXO4P98177 505 aa20.56■□□□□ 0.88
PKDCC-203ENST00000470578 WASHC4Q2M389 1173 aa20.56■□□□□ 0.88
PKDCC-203ENST00000470578 GPC2Q8N158 579 aa20.56■□□□□ 0.88
PKDCC-203ENST00000470578 TBC1D16Q8TBP0 767 aa20.56■□□□□ 0.88
PKDCC-203ENST00000470578 L3MBTL3Q96JM7 780 aaPredicted RBP20.56■□□□□ 0.88
PKDCC-203ENST00000470578 BSDC1Q9NW68 430 aaPredicted RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms