RNA–Protein interactions for RNA: ENST00000470458.1

RFTN1-208, Transcript of raftlin, lipid raft linker 1, human

TSL 4

Gene RFTN1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFTN1-208	ENST00000470458	RASSF7	Q02833	373 aa		13.81	□□□□□ -0.2
RFTN1-208	ENST00000470458	DPP8	Q6V1X1	898 aa	Predicted RBP	13.81	□□□□□ -0.2
RFTN1-208	ENST00000470458	MPND	Q8N594	471 aa		13.81	□□□□□ -0.2
RFTN1-208	ENST00000470458	ABCC4	O15439	1325 aa		13.81	□□□□□ -0.2
RFTN1-208	ENST00000470458	LAMB2	P55268	1798 aa		13.81	□□□□□ -0.2
RFTN1-208	ENST00000470458	NEURL1B	A8MQ27	555 aa		13.8	□□□□□ -0.2
RFTN1-208	ENST00000470458	FSTL1	Q12841	308 aa		13.8	□□□□□ -0.2
RFTN1-208	ENST00000470458	RBM46	Q8TBY0	533 aa	Known RBP	13.8	□□□□□ -0.2
RFTN1-208	ENST00000470458	EYA3	Q99504	573 aa		13.8	□□□□□ -0.2
RFTN1-208	ENST00000470458	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.8	□□□□□ -0.2
RFTN1-208	ENST00000470458	MYH3	P11055	1940 aa		13.8	□□□□□ -0.2
RFTN1-208	ENST00000470458		H7C1W4	665 aa		13.79	□□□□□ -0.2
RFTN1-208	ENST00000470458	ALDH1L1	O75891	902 aa		13.79	□□□□□ -0.2
RFTN1-208	ENST00000470458	GCKR	Q14397	625 aa		13.79	□□□□□ -0.2
RFTN1-208	ENST00000470458	NIM1K	Q8IY84	436 aa		13.79	□□□□□ -0.2
RFTN1-208	ENST00000470458	LARGE2	Q8N3Y3	721 aa		13.79	□□□□□ -0.2
RFTN1-208	ENST00000470458	PLA2G12B	Q9BX93	195 aa		13.79	□□□□□ -0.2
RFTN1-208	ENST00000470458	DDX60	Q8IY21	1712 aa	Known RBP	13.78	□□□□□ -0.2
RFTN1-208	ENST00000470458	SENP3-EIF4A1	A0A087X0R7	540 aa		13.78	□□□□□ -0.2
RFTN1-208	ENST00000470458	ANKRD18A	Q8IVF6	992 aa		13.78	□□□□□ -0.2
RFTN1-208	ENST00000470458	GPC2	Q8N158	579 aa		13.78	□□□□□ -0.2
RFTN1-208	ENST00000470458	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.78	□□□□□ -0.2
RFTN1-208	ENST00000470458	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.78	□□□□□ -0.2
RFTN1-208	ENST00000470458	RTL9	Q8NET4	1388 aa		13.78	□□□□□ -0.2
RFTN1-208	ENST00000470458	TIAM2	Q8IVF5	1701 aa		13.78	□□□□□ -0.2
RFTN1-208	ENST00000470458	FZD9	O00144	591 aa		13.77	□□□□□ -0.21
RFTN1-208	ENST00000470458	TCERG1	O14776	1098 aa	Known RBP	13.77	□□□□□ -0.21
RFTN1-208	ENST00000470458	KIF3C	O14782	793 aa		13.77	□□□□□ -0.21
RFTN1-208	ENST00000470458	IGKV5-2	P06315	115 aa		13.77	□□□□□ -0.21
RFTN1-208	ENST00000470458	SCN4A	P35499	1836 aa		13.77	□□□□□ -0.21
RFTN1-208	ENST00000470458	G2E3	Q7L622	706 aa		13.77	□□□□□ -0.21
RFTN1-208	ENST00000470458	TRMT2A	Q8IZ69	625 aa	Known RBP	13.77	□□□□□ -0.21
RFTN1-208	ENST00000470458	SMC1B	Q8NDV3	1235 aa		13.77	□□□□□ -0.21
RFTN1-208	ENST00000470458	SRCIN1	Q9C0H9	1055 aa		13.77	□□□□□ -0.21
RFTN1-208	ENST00000470458	RRAGC	Q9HB90	399 aa		13.77	□□□□□ -0.21
RFTN1-208	ENST00000470458	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.77	□□□□□ -0.21
RFTN1-208	ENST00000470458	PPIP5K2	O43314	1243 aa		13.76	□□□□□ -0.21
RFTN1-208	ENST00000470458	IGHMBP2	P38935	993 aa	Known RBP	13.76	□□□□□ -0.21
RFTN1-208	ENST00000470458	CTSW	P56202	376 aa		13.76	□□□□□ -0.21
RFTN1-208	ENST00000470458	TNIP1	Q15025	636 aa		13.76	□□□□□ -0.21
RFTN1-208	ENST00000470458	RTL5	Q5HYW3	569 aa	Predicted RBP	13.76	□□□□□ -0.21
RFTN1-208	ENST00000470458	C3orf67	Q6ZVT6	689 aa		13.76	□□□□□ -0.21
RFTN1-208	ENST00000470458	PNMA8A	Q86V59	439 aa	Predicted RBP	13.76	□□□□□ -0.21
RFTN1-208	ENST00000470458	MIER1	Q8N108	512 aa		13.76	□□□□□ -0.21
RFTN1-208	ENST00000470458	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.76	□□□□□ -0.21
RFTN1-208	ENST00000470458	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.76	□□□□□ -0.21
RFTN1-208	ENST00000470458	WDR90	Q96KV7	1748 aa		13.76	□□□□□ -0.21
RFTN1-208	ENST00000470458		G3V3G9	751 aa		13.75	□□□□□ -0.21
RFTN1-208	ENST00000470458	IPO8	O15397	1037 aa	Known RBP	13.75	□□□□□ -0.21
RFTN1-208	ENST00000470458	LMOD1	P29536	600 aa	Predicted RBP	13.75	□□□□□ -0.21
RFTN1-208	ENST00000470458	BRPF1	P55201	1214 aa	Predicted RBP	13.75	□□□□□ -0.21
RFTN1-208	ENST00000470458	KIAA2012	Q0VF49	1180 aa		13.75	□□□□□ -0.21
RFTN1-208	ENST00000470458	WASHC4	Q2M389	1173 aa		13.75	□□□□□ -0.21
RFTN1-208	ENST00000470458	DCAF8	Q5TAQ9	597 aa		13.75	□□□□□ -0.21
RFTN1-208	ENST00000470458	UBE3B	Q7Z3V4	1068 aa		13.75	□□□□□ -0.21
RFTN1-208	ENST00000470458	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.75	□□□□□ -0.21
RFTN1-208	ENST00000470458	PODXL2	Q9NZ53	605 aa		13.75	□□□□□ -0.21
RFTN1-208	ENST00000470458	ANKIB1	Q9P2G1	1089 aa		13.75	□□□□□ -0.21
RFTN1-208	ENST00000470458	ZNRF3	Q9ULT6	936 aa		13.75	□□□□□ -0.21
RFTN1-208	ENST00000470458	CWF19L2	Q2TBE0	894 aa	Known RBP	13.74	□□□□□ -0.21
RFTN1-208	ENST00000470458	BEND3	Q5T5X7	828 aa		13.74	□□□□□ -0.21
RFTN1-208	ENST00000470458	TTLL11	Q8NHH1	800 aa		13.74	□□□□□ -0.21
RFTN1-208	ENST00000470458	MPHOSPH8	Q99549	860 aa		13.74	□□□□□ -0.21
RFTN1-208	ENST00000470458	ANKRD2	Q9GZV1	360 aa		13.74	□□□□□ -0.21
RFTN1-208	ENST00000470458	NMRK2	Q9NPI5	230 aa		13.74	□□□□□ -0.21
RFTN1-208	ENST00000470458	BSDC1	Q9NW68	430 aa	Predicted RBP	13.74	□□□□□ -0.21
RFTN1-208	ENST00000470458	ANKRD18B	A2A2Z9	1011 aa		13.73	□□□□□ -0.21
RFTN1-208	ENST00000470458	C6orf229	H3BNL8	230 aa		13.73	□□□□□ -0.21
RFTN1-208	ENST00000470458	GRM8	O00222	908 aa		13.73	□□□□□ -0.21
RFTN1-208	ENST00000470458	ATP2B4	P23634	1241 aa		13.73	□□□□□ -0.21
RFTN1-208	ENST00000470458	APLP1	P51693	650 aa		13.73	□□□□□ -0.21
RFTN1-208	ENST00000470458	IFIT5	Q13325	482 aa	Known RBP	13.73	□□□□□ -0.21
RFTN1-208	ENST00000470458	SLC4A10	Q6U841	1118 aa		13.73	□□□□□ -0.21
RFTN1-208	ENST00000470458	MRPL50	Q8N5N7	158 aa	Known RBP	13.73	□□□□□ -0.21
RFTN1-208	ENST00000470458	ARHGAP45	Q92619	1136 aa		13.73	□□□□□ -0.21
RFTN1-208	ENST00000470458	API5	Q9BZZ5	524 aa	Known RBP	13.73	□□□□□ -0.21
RFTN1-208	ENST00000470458	SMC4	Q9NTJ3	1288 aa		13.73	□□□□□ -0.21
RFTN1-208	ENST00000470458	HACL1	Q9UJ83	578 aa		13.73	□□□□□ -0.21
RFTN1-208	ENST00000470458	GGA1	Q9UJY5	639 aa		13.73	□□□□□ -0.21
RFTN1-208	ENST00000470458	SNED1	Q8TER0	1413 aa		13.73	□□□□□ -0.21
RFTN1-208	ENST00000470458	XDH	P47989	1333 aa		13.72	□□□□□ -0.21
RFTN1-208	ENST00000470458	CSF1R	P07333	972 aa		13.72	□□□□□ -0.21
RFTN1-208	ENST00000470458	HSPA6	P17066	643 aa		13.72	□□□□□ -0.21
RFTN1-208	ENST00000470458	MMP14	P50281	582 aa		13.72	□□□□□ -0.21
RFTN1-208	ENST00000470458	CCT4	P50991	539 aa	Known RBP	13.72	□□□□□ -0.21
RFTN1-208	ENST00000470458	PRELP	P51888	382 aa		13.72	□□□□□ -0.21
RFTN1-208	ENST00000470458	CCDC57	Q2TAC2	916 aa		13.72	□□□□□ -0.21
RFTN1-208	ENST00000470458	CELF1	Q92879	486 aa	Known RBP	13.72	□□□□□ -0.21
RFTN1-208	ENST00000470458	KIF16B	Q96L93	1317 aa		13.71	□□□□□ -0.21
RFTN1-208	ENST00000470458	LRRC37A	A6NMS7	1700 aa		13.71	□□□□□ -0.21
RFTN1-208	ENST00000470458	DDN	O94850	711 aa	Predicted RBP	13.71	□□□□□ -0.21
RFTN1-208	ENST00000470458	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
RFTN1-208	ENST00000470458	SSH1	Q8WYL5	1049 aa		13.71	□□□□□ -0.21
RFTN1-208	ENST00000470458	LEMD3	Q9Y2U8	911 aa		13.71	□□□□□ -0.21
RFTN1-208	ENST00000470458		F6X3S4	739 aa		13.7	□□□□□ -0.22
RFTN1-208	ENST00000470458	AOC3	Q16853	763 aa		13.7	□□□□□ -0.22
RFTN1-208	ENST00000470458	TAF7L	Q5H9L4	462 aa		13.7	□□□□□ -0.22
RFTN1-208	ENST00000470458	CIAPIN1	Q6FI81	312 aa		13.7	□□□□□ -0.22
RFTN1-208	ENST00000470458	OLFM4	Q6UX06	510 aa		13.7	□□□□□ -0.22
RFTN1-208	ENST00000470458	LDHD	Q86WU2	507 aa		13.7	□□□□□ -0.22

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