RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 IFT57Q9NWB7 429 aa14.93□□□□□ -0.02
HLA-C-206ENST00000470363 HYPKQ9NX55 129 aa14.93□□□□□ -0.02
HLA-C-206ENST00000470363 MKRN1Q9UHC7 482 aaKnown RBP14.93□□□□□ -0.02
HLA-C-206ENST00000470363 CNTNAP1P78357 1384 aa14.93□□□□□ -0.02
HLA-C-206ENST00000470363 TMEM88BA6NKF7 163 aa14.92□□□□□ -0.02
HLA-C-206ENST00000470363 ATP5J2-PTCD1G3V325 749 aa14.92□□□□□ -0.02
HLA-C-206ENST00000470363 CXCL9Q07325 125 aa14.92□□□□□ -0.02
HLA-C-206ENST00000470363 GJA3Q9Y6H8 435 aa14.92□□□□□ -0.02
HLA-C-206ENST00000470363 ZBED9Q6R2W3 1325 aa14.92□□□□□ -0.02
HLA-C-206ENST00000470363 ANKRD36CQ5JPF3 1778 aa14.91□□□□□ -0.02
HLA-C-206ENST00000470363 PPIP5K2O43314 1243 aa14.91□□□□□ -0.02
HLA-C-206ENST00000470363 KIAA2012Q0VF49 1180 aa14.91□□□□□ -0.02
HLA-C-206ENST00000470363 DDX46Q7L014 1031 aaKnown RBP14.91□□□□□ -0.02
HLA-C-206ENST00000470363 NIM1KQ8IY84 436 aa14.91□□□□□ -0.02
HLA-C-206ENST00000470363 MPNDQ8N594 471 aa14.91□□□□□ -0.02
HLA-C-206ENST00000470363 C8orf58Q8NAV2 365 aa14.91□□□□□ -0.02
HLA-C-206ENST00000470363 ZNF428Q96B54 188 aa14.91□□□□□ -0.02
HLA-C-206ENST00000470363 FAM89AQ96GI7 184 aa14.91□□□□□ -0.02
HLA-C-206ENST00000470363 ZNRF3Q9ULT6 936 aa14.91□□□□□ -0.02
HLA-C-206ENST00000470363 VEGFBP49765 207 aa14.9□□□□□ -0.02
HLA-C-206ENST00000470363 GNAI1P63096 354 aa14.9□□□□□ -0.02
HLA-C-206ENST00000470363 DPP8Q6V1X1 898 aaPredicted RBP14.9□□□□□ -0.02
HLA-C-206ENST00000470363 USP50Q70EL3 339 aaPredicted RBP14.9□□□□□ -0.02
HLA-C-206ENST00000470363 SUPT20HQ8NEM7 779 aa14.9□□□□□ -0.02
HLA-C-206ENST00000470363 PHAXQ9H814 394 aaKnown RBP14.9□□□□□ -0.02
HLA-C-206ENST00000470363 CLEC11AQ9Y240 323 aa14.9□□□□□ -0.02
HLA-C-206ENST00000470363 LAMB2P55268 1798 aa14.9□□□□□ -0.02
HLA-C-206ENST00000470363 RASSF10A6NK89 507 aa14.89□□□□□ -0.03
HLA-C-206ENST00000470363 TMC4Q7Z404 712 aa14.89□□□□□ -0.03
HLA-C-206ENST00000470363 CELF1Q92879 486 aaKnown RBP14.89□□□□□ -0.03
HLA-C-206ENST00000470363 GPRC5DQ9NZD1 345 aa14.89□□□□□ -0.03
HLA-C-206ENST00000470363 PGAP2Q9UHJ9 254 aa14.89□□□□□ -0.03
HLA-C-206ENST00000470363 COL4A1P02462 1669 aa14.88□□□□□ -0.03
HLA-C-206ENST00000470363 YDJCA8MPS7 323 aa14.88□□□□□ -0.03
HLA-C-206ENST00000470363 FMR1Q06787 632 aaKnown RBP eCLIP14.88□□□□□ -0.03
HLA-C-206ENST00000470363 TMX4Q9H1E5 349 aaPredicted RBP14.88□□□□□ -0.03
HLA-C-206ENST00000470363 DUOX1Q9NRD9 1551 aa14.88□□□□□ -0.03
HLA-C-206ENST00000470363 ELL2O00472 640 aaPredicted RBP14.87□□□□□ -0.03
HLA-C-206ENST00000470363 LMOD1P29536 600 aaPredicted RBP14.87□□□□□ -0.03
HLA-C-206ENST00000470363 CALD1Q05682 793 aaKnown RBP14.87□□□□□ -0.03
HLA-C-206ENST00000470363 CST9Q5W186 159 aa14.87□□□□□ -0.03
HLA-C-206ENST00000470363 TSPYL6Q8N831 410 aa14.87□□□□□ -0.03
HLA-C-206ENST00000470363 ZBTB38Q8NAP3 1195 aaPredicted RBP14.87□□□□□ -0.03
HLA-C-206ENST00000470363 CDCA7LQ96GN5 454 aa14.87□□□□□ -0.03
HLA-C-206ENST00000470363 POLLQ9UGP5 575 aa14.87□□□□□ -0.03
HLA-C-206ENST00000470363 DDX60Q8IY21 1712 aaKnown RBP14.86□□□□□ -0.03
HLA-C-206ENST00000470363 IRS4O14654 1257 aaPredicted RBP14.86□□□□□ -0.03
HLA-C-206ENST00000470363 GMPSP49915 693 aaPredicted RBP14.86□□□□□ -0.03
HLA-C-206ENST00000470363 HIRAP54198 1017 aaPredicted RBP14.86□□□□□ -0.03
HLA-C-206ENST00000470363 WWC1Q8IX03 1113 aa14.86□□□□□ -0.03
HLA-C-206ENST00000470363 ADARB2Q9NS39 739 aaKnown RBP14.86□□□□□ -0.03
HLA-C-206ENST00000470363 TAF1P21675 1872 aa14.86□□□□□ -0.03
HLA-C-206ENST00000470363 FOXN1O15353 648 aa14.85□□□□□ -0.03
HLA-C-206ENST00000470363 RAD17O75943 681 aa14.85□□□□□ -0.03
HLA-C-206ENST00000470363 CCDC27Q2M243 656 aa14.85□□□□□ -0.03
HLA-C-206ENST00000470363 DEFB115Q30KQ5 88 aa14.85□□□□□ -0.03
HLA-C-206ENST00000470363 RTL5Q5HYW3 569 aaPredicted RBP14.85□□□□□ -0.03
HLA-C-206ENST00000470363 CIAPIN1Q6FI81 312 aa14.85□□□□□ -0.03
HLA-C-206ENST00000470363 RIC3Q7Z5B4 369 aa14.85□□□□□ -0.03
HLA-C-206ENST00000470363 WBP1LQ9NX94 342 aa14.85□□□□□ -0.03
HLA-C-206ENST00000470363 LRRC37AA6NMS7 1700 aa14.85□□□□□ -0.03
HLA-C-206ENST00000470363 ZNF521Q96K83 1311 aa14.85□□□□□ -0.03
HLA-C-206ENST00000470363 TRAF5O00463 557 aa14.84□□□□□ -0.03
HLA-C-206ENST00000470363 PCCAP05165 728 aaPredicted RBP14.84□□□□□ -0.03
HLA-C-206ENST00000470363 CENPBP07199 599 aaPredicted RBP14.84□□□□□ -0.03
HLA-C-206ENST00000470363 RPS8P62241 208 aaKnown RBP14.84□□□□□ -0.03
HLA-C-206ENST00000470363 GPSM2P81274 684 aa14.84□□□□□ -0.03
HLA-C-206ENST00000470363 TNIP1Q15025 636 aa14.84□□□□□ -0.03
HLA-C-206ENST00000470363 TNS4Q8IZW8 715 aa14.84□□□□□ -0.03
HLA-C-206ENST00000470363 CCDC191Q8NCU4 936 aa14.84□□□□□ -0.03
HLA-C-206ENST00000470363 CDHR2Q9BYE9 1310 aa14.84□□□□□ -0.03
HLA-C-206ENST00000470363 SHTN1A0MZ66 631 aa14.83□□□□□ -0.04
HLA-C-206ENST00000470363 GOLGA2Q08379 1002 aa14.83□□□□□ -0.04
HLA-C-206ENST00000470363 WASHC4Q2M389 1173 aa14.83□□□□□ -0.04
HLA-C-206ENST00000470363 NCBP3Q53F19 620 aaKnown RBP14.83□□□□□ -0.04
HLA-C-206ENST00000470363 MYD88Q99836 296 aa14.83□□□□□ -0.04
HLA-C-206ENST00000470363 METTL22Q9BUU2 404 aaPredicted RBP14.83□□□□□ -0.04
HLA-C-206ENST00000470363 SPINK5Q9NQ38 1064 aaPredicted RBP14.83□□□□□ -0.04
HLA-C-206ENST00000470363 SEC31BQ9NQW1 1179 aa14.83□□□□□ -0.04
HLA-C-206ENST00000470363 KCNQ5Q9NR82 932 aa14.83□□□□□ -0.04
HLA-C-206ENST00000470363 PODXL2Q9NZ53 605 aa14.83□□□□□ -0.04
HLA-C-206ENST00000470363 NSFL1CQ9UNZ2 370 aaKnown RBP14.83□□□□□ -0.04
HLA-C-206ENST00000470363 CCDC30Q5VVM6 783 aa14.82□□□□□ -0.04
HLA-C-206ENST00000470363 TBC1D16Q8TBP0 767 aa14.82□□□□□ -0.04
HLA-C-206ENST00000470363 ZC3H15Q8WU90 426 aaKnown RBP14.82□□□□□ -0.04
HLA-C-206ENST00000470363 DPF2Q92785 391 aa14.82□□□□□ -0.04
HLA-C-206ENST00000470363 CNOT7Q9UIV1 285 aaKnown RBP14.82□□□□□ -0.04
HLA-C-206ENST00000470363 WDR33Q9C0J8 1336 aaKnown RBP14.82□□□□□ -0.04
HLA-C-206ENST00000470363 IGKV5-2P06315 115 aa14.81□□□□□ -0.04
HLA-C-206ENST00000470363 TRPM4Q8TD43 1214 aa14.81□□□□□ -0.04
HLA-C-206ENST00000470363 TSR2Q969E8 191 aaKnown RBP14.81□□□□□ -0.04
HLA-C-206ENST00000470363 PRDM10Q9NQV6 1147 aa14.81□□□□□ -0.04
HLA-C-206ENST00000470363 PSMD14O00487 310 aa14.8□□□□□ -0.04
HLA-C-206ENST00000470363 PDE8AO60658 829 aa14.8□□□□□ -0.04
HLA-C-206ENST00000470363 KSR2Q6VAB6 950 aa14.8□□□□□ -0.04
HLA-C-206ENST00000470363 JARID2Q92833 1246 aaPredicted RBP14.8□□□□□ -0.04
HLA-C-206ENST00000470363 CHMP4AQ9BY43 222 aa14.8□□□□□ -0.04
HLA-C-206ENST00000470363 GLIS2Q9BZE0 524 aaPredicted RBP14.8□□□□□ -0.04
HLA-C-206ENST00000470363 DBNDD1Q9H9R9 158 aa14.8□□□□□ -0.04
HLA-C-206ENST00000470363 CWC25Q9NXE8 425 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms