RNA–Protein interactions for RNA: ENST00000470056.5

GAPVD1-215, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 8,923 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-215ENST00000470056 RGPD2P0DJD1 1756 aa8.3□□□□□ -1.08
GAPVD1-215ENST00000470056 SCN11AQ9UI33 1791 aa8.3□□□□□ -1.08
GAPVD1-215ENST00000470056 TTLL7Q6ZT98 887 aa8.3□□□□□ -1.08
GAPVD1-215ENST00000470056 UNC5CLQ8IV45 518 aa8.3□□□□□ -1.08
GAPVD1-215ENST00000470056 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.3□□□□□ -1.081e-6■■■■□ 20.7
GAPVD1-215ENST00000470056 MAP4K4O95819 1239 aaPredicted RBP8.3□□□□□ -1.08
GAPVD1-215ENST00000470056 ATP6V1AP38606 617 aa8.3□□□□□ -1.08
GAPVD1-215ENST00000470056 TTC39AQ5SRH9 613 aa8.3□□□□□ -1.08
GAPVD1-215ENST00000470056 DNAJC2Q99543 621 aaKnown RBP8.3□□□□□ -1.08
GAPVD1-215ENST00000470056 ZBTB38Q8NAP3 1195 aaPredicted RBP8.3□□□□□ -1.08
GAPVD1-215ENST00000470056 ISCA1Q9BUE6 129 aa8.3□□□□□ -1.08
GAPVD1-215ENST00000470056 CRYBG1Q9Y4K1 1723 aa8.3□□□□□ -1.08
GAPVD1-215ENST00000470056 HSPA4P34932 840 aa8.3□□□□□ -1.08
GAPVD1-215ENST00000470056 TFCP2Q12800 502 aa8.3□□□□□ -1.08
GAPVD1-215ENST00000470056 PLA2G12BQ9BX93 195 aa8.3□□□□□ -1.08
GAPVD1-215ENST00000470056 DISP2A7MBM2 1401 aa8.3□□□□□ -1.08
GAPVD1-215ENST00000470056 BOLA2Q9H3K6 86 aa8.3□□□□□ -1.08
GAPVD1-215ENST00000470056 CNNM1Q9NRU3 951 aa8.3□□□□□ -1.08
GAPVD1-215ENST00000470056 ASAP1Q9ULH1 1129 aa8.3□□□□□ -1.08
GAPVD1-215ENST00000470056 PRIM1P49642 420 aaKnown RBP8.29□□□□□ -1.08
GAPVD1-215ENST00000470056 EAF2Q96CJ1 260 aaPredicted RBP8.29□□□□□ -1.08
GAPVD1-215ENST00000470056 INTS4Q96HW7 963 aaKnown RBP8.29□□□□□ -1.08
GAPVD1-215ENST00000470056 BCL9O00512 1426 aa8.29□□□□□ -1.08
GAPVD1-215ENST00000470056 MCM4P33991 863 aa8.29□□□□□ -1.08
GAPVD1-215ENST00000470056 SH2B1Q9NRF2 756 aaPredicted RBP8.29□□□□□ -1.08
GAPVD1-215ENST00000470056 SPATA31A5Q5VU36 1347 aa8.29□□□□□ -1.08
GAPVD1-215ENST00000470056 SPATA31A6Q5VVP1 1343 aa8.29□□□□□ -1.08
GAPVD1-215ENST00000470056 SPATA31A7Q8IWB4 1347 aa8.29□□□□□ -1.08
GAPVD1-215ENST00000470056 N4BP2Q86UW6 1770 aaPredicted RBP8.29□□□□□ -1.08
GAPVD1-215ENST00000470056 PTPN12Q05209 780 aaKnown RBP8.29□□□□□ -1.08
GAPVD1-215ENST00000470056 U3KPZ7 1027 aaPredicted RBP8.29□□□□□ -1.08
GAPVD1-215ENST00000470056 ZFYP08048 801 aaPredicted RBP8.29□□□□□ -1.08
GAPVD1-215ENST00000470056 NASPP49321 788 aaPredicted RBP8.29□□□□□ -1.08
GAPVD1-215ENST00000470056 ROBO1Q9Y6N7 1651 aa8.29□□□□□ -1.08
GAPVD1-215ENST00000470056 ANTXR1Q9H6X2 564 aa8.28□□□□□ -1.08
GAPVD1-215ENST00000470056 GOLGA6L19H0YKK7 550 aa8.28□□□□□ -1.08
GAPVD1-215ENST00000470056 GTF2E1P29083 439 aaPredicted RBP8.28□□□□□ -1.08
GAPVD1-215ENST00000470056 LRP10Q7Z4F1 713 aa8.28□□□□□ -1.08
GAPVD1-215ENST00000470056 FAM184AQ8NB25 1140 aa8.28□□□□□ -1.08
GAPVD1-215ENST00000470056 LRP6O75581 1613 aa8.28□□□□□ -1.08
GAPVD1-215ENST00000470056 TPM1P09493 284 aa8.28□□□□□ -1.08
GAPVD1-215ENST00000470056 IFIT1P09914 478 aaKnown RBP8.28□□□□□ -1.08
GAPVD1-215ENST00000470056 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.28□□□□□ -1.08
GAPVD1-215ENST00000470056 UBE2Q2Q8WVN8 375 aa8.28□□□□□ -1.08
GAPVD1-215ENST00000470056 SASH1O94885 1247 aa8.28□□□□□ -1.08
GAPVD1-215ENST00000470056 TTF1Q15361 905 aaPredicted RBP8.28□□□□□ -1.08
GAPVD1-215ENST00000470056 TM6SF1Q9BZW5 370 aa8.28□□□□□ -1.08
GAPVD1-215ENST00000470056 CTNNA3Q9UI47 895 aa8.28□□□□□ -1.08
GAPVD1-215ENST00000470056 TBC1D2BQ9UPU7 963 aa8.28□□□□□ -1.08
GAPVD1-215ENST00000470056 CCDC171Q6TFL3 1326 aa8.28□□□□□ -1.08
GAPVD1-215ENST00000470056 METTL24Q5JXM2 366 aa8.28□□□□□ -1.08
GAPVD1-215ENST00000470056 PDE8AO60658 829 aa8.28□□□□□ -1.08
GAPVD1-215ENST00000470056 HMGB1P09429 215 aaKnown RBP8.28□□□□□ -1.08
GAPVD1-215ENST00000470056 CYP19A1P11511 503 aaPredicted RBP8.28□□□□□ -1.08
GAPVD1-215ENST00000470056 IGHMBP2P38935 993 aaKnown RBP8.28□□□□□ -1.08
GAPVD1-215ENST00000470056 UTP14AQ9BVJ6 771 aaKnown RBP8.28□□□□□ -1.08
GAPVD1-215ENST00000470056 FOXD4L1Q9NU39 408 aa8.28□□□□□ -1.08
GAPVD1-215ENST00000470056 RAB3GAP1Q15042 981 aa8.28□□□□□ -1.08
GAPVD1-215ENST00000470056 XIRP1Q702N8 1843 aaKnown RBP8.27□□□□□ -1.08
GAPVD1-215ENST00000470056 UQCRFS1P1P0C7P4 283 aa8.27□□□□□ -1.08
GAPVD1-215ENST00000470056 VPS72Q15906 364 aa8.27□□□□□ -1.08
GAPVD1-215ENST00000470056 PDRG1Q9NUG6 133 aa8.27□□□□□ -1.08
GAPVD1-215ENST00000470056 GNL2Q13823 731 aaKnown RBP8.27□□□□□ -1.09
GAPVD1-215ENST00000470056 IRS4O14654 1257 aaPredicted RBP8.27□□□□□ -1.09
GAPVD1-215ENST00000470056 RGL2O15211 777 aa8.27□□□□□ -1.09
GAPVD1-215ENST00000470056 C8orf37Q96NL8 207 aa8.27□□□□□ -1.09
GAPVD1-215ENST00000470056 HELLSQ9NRZ9 838 aa8.27□□□□□ -1.09
GAPVD1-215ENST00000470056 SH3TC1Q8TE82 1336 aa8.27□□□□□ -1.09
GAPVD1-215ENST00000470056 NPHP1O15259 732 aa8.27□□□□□ -1.09
GAPVD1-215ENST00000470056 CDR1P51861 262 aa8.27□□□□□ -1.09
GAPVD1-215ENST00000470056 CCDC152Q4G0S7 254 aa8.27□□□□□ -1.09
GAPVD1-215ENST00000470056 LIMCH1Q9UPQ0 1083 aa8.27□□□□□ -1.09
GAPVD1-215ENST00000470056 COL22A1Q8NFW1 1626 aaPredicted RBP8.27□□□□□ -1.09
GAPVD1-215ENST00000470056 ABCC12Q96J65 1359 aa8.27□□□□□ -1.09
GAPVD1-215ENST00000470056 PRPF40BQ6NWY9 871 aaKnown RBP8.27□□□□□ -1.09
GAPVD1-215ENST00000470056 MPHOSPH8Q99549 860 aa8.27□□□□□ -1.09
GAPVD1-215ENST00000470056 FAM13BQ9NYF5 915 aa8.27□□□□□ -1.09
GAPVD1-215ENST00000470056 SIPA1L3O60292 1781 aaPredicted RBP8.27□□□□□ -1.09
GAPVD1-215ENST00000470056 KCPQ6ZWJ8 1503 aa8.27□□□□□ -1.09
GAPVD1-215ENST00000470056 NMIQ13287 307 aaPredicted RBP8.27□□□□□ -1.09
GAPVD1-215ENST00000470056 EPHA10Q5JZY3 1008 aa8.27□□□□□ -1.09
GAPVD1-215ENST00000470056 KAZALD1Q96I82 304 aa8.27□□□□□ -1.09
GAPVD1-215ENST00000470056 RGPD5Q99666 1765 aa8.27□□□□□ -1.09
GAPVD1-215ENST00000470056 WDR33Q9C0J8 1336 aaKnown RBP8.27□□□□□ -1.09
GAPVD1-215ENST00000470056 RFX5P48382 616 aaPredicted RBP8.27□□□□□ -1.09
GAPVD1-215ENST00000470056 BLOC1S2Q6QNY1 142 aa8.27□□□□□ -1.09
GAPVD1-215ENST00000470056 LDHAL6AQ6ZMR3 332 aa8.27□□□□□ -1.09
GAPVD1-215ENST00000470056 SMC3Q9UQE7 1217 aa8.27□□□□□ -1.09
GAPVD1-215ENST00000470056 PDCP20941 246 aa8.26□□□□□ -1.09
GAPVD1-215ENST00000470056 LOC102724428A0A0B4J2F2 783 aa8.26□□□□□ -1.09
GAPVD1-215ENST00000470056 MCM5P33992 734 aa8.26□□□□□ -1.09
GAPVD1-215ENST00000470056 SIK1P57059 783 aa8.26□□□□□ -1.09
GAPVD1-215ENST00000470056 JAKMIP1Q96N16 626 aaKnown RBP8.26□□□□□ -1.09
GAPVD1-215ENST00000470056 HAUS7Q99871 368 aa8.26□□□□□ -1.09
GAPVD1-215ENST00000470056 PAG1Q9NWQ8 432 aa8.26□□□□□ -1.09
GAPVD1-215ENST00000470056 GPTP24298 496 aa8.26□□□□□ -1.09
GAPVD1-215ENST00000470056 MCMDC2Q4G0Z9 681 aa8.26□□□□□ -1.09
GAPVD1-215ENST00000470056 ERCC4Q92889 916 aaPredicted RBP8.26□□□□□ -1.09
GAPVD1-215ENST00000470056 KIF2CQ99661 725 aa8.26□□□□□ -1.09
GAPVD1-215ENST00000470056 ATP2B3Q16720 1220 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms