RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 SH3TC1Q8TE82 1336 aa22.15■■□□□ 1.14
SMC4-211ENST00000469858 PDE8AO60658 829 aa22.15■■□□□ 1.14
SMC4-211ENST00000469858 IL15P40933 162 aaPredicted RBP22.15■■□□□ 1.14
SMC4-211ENST00000469858 RBM25P49756 843 aaKnown RBP22.15■■□□□ 1.14
SMC4-211ENST00000469858 TAF7LQ5H9L4 462 aa22.15■■□□□ 1.14
SMC4-211ENST00000469858 CNTROBQ8N137 903 aa22.15■■□□□ 1.14
SMC4-211ENST00000469858 CLEC4GQ6UXB4 293 aa22.14■■□□□ 1.14
SMC4-211ENST00000469858 PUS3Q9BZE2 481 aaKnown RBP22.14■■□□□ 1.14
SMC4-211ENST00000469858 DDX60Q8IY21 1712 aaKnown RBP22.14■■□□□ 1.13
SMC4-211ENST00000469858 CIAO1O76071 339 aa22.14■■□□□ 1.13
SMC4-211ENST00000469858 TRIM37O94972 964 aa22.14■■□□□ 1.13
SMC4-211ENST00000469858 GREM2Q9H772 168 aa22.14■■□□□ 1.13
SMC4-211ENST00000469858 RTCBQ9Y3I0 505 aaKnown RBP22.14■■□□□ 1.13
SMC4-211ENST00000469858 CHMLP26374 656 aa22.13■■□□□ 1.13
SMC4-211ENST00000469858 DBNLQ9UJU6 430 aaKnown RBP22.13■■□□□ 1.13
SMC4-211ENST00000469858 LAMB2P55268 1798 aa22.13■■□□□ 1.13
SMC4-211ENST00000469858 ITGA6P23229 1130 aa22.12■■□□□ 1.13
SMC4-211ENST00000469858 DAXXQ9UER7 740 aaPredicted RBP22.12■■□□□ 1.13
SMC4-211ENST00000469858 NTSR2O95665 410 aa22.12■■□□□ 1.13
SMC4-211ENST00000469858 HCLS1P14317 486 aaPredicted RBP22.12■■□□□ 1.13
SMC4-211ENST00000469858 SLC4A3P48751 1232 aa22.12■■□□□ 1.13
SMC4-211ENST00000469858 ERICH6Q7L0X2 663 aa22.12■■□□□ 1.13
SMC4-211ENST00000469858 C4AP0C0L4 1744 aa22.11■■□□□ 1.13
SMC4-211ENST00000469858 LRRC4BQ9NT99 713 aa22.11■■□□□ 1.13
SMC4-211ENST00000469858 ANKRD18BA2A2Z9 1011 aa22.1■■□□□ 1.13
SMC4-211ENST00000469858 REC8O95072 547 aa22.1■■□□□ 1.13
SMC4-211ENST00000469858 USPL1Q5W0Q7 1092 aa22.1■■□□□ 1.13
SMC4-211ENST00000469858 AMIGO3Q86WK7 504 aa22.1■■□□□ 1.13
SMC4-211ENST00000469858 AK7Q96M32 723 aa22.1■■□□□ 1.13
SMC4-211ENST00000469858 ESYT1Q9BSJ8 1104 aa22.1■■□□□ 1.13
SMC4-211ENST00000469858 SRP68Q9UHB9 627 aaKnown RBP22.1■■□□□ 1.13
SMC4-211ENST00000469858 NARFQ9UHQ1 456 aa22.1■■□□□ 1.13
SMC4-211ENST00000469858 FBXO3Q9UK99 471 aa22.1■■□□□ 1.13
SMC4-211ENST00000469858 DBNDD2Q9BQY9 259 aa22.1■■□□□ 1.13
SMC4-211ENST00000469858 ZNF609O15014 1411 aa22.09■■□□□ 1.13
SMC4-211ENST00000469858 BICDL1Q6ZP65 573 aa22.09■■□□□ 1.13
SMC4-211ENST00000469858 BOLA2Q9H3K6 86 aa22.09■■□□□ 1.13
SMC4-211ENST00000469858 BCL2L12Q9HB09 334 aa22.09■■□□□ 1.13
SMC4-211ENST00000469858 GPR108Q9NPR9 543 aa22.09■■□□□ 1.13
SMC4-211ENST00000469858 ZPR1O75312 459 aa22.08■■□□□ 1.13
SMC4-211ENST00000469858 NEUROD6Q96NK8 337 aa22.08■■□□□ 1.13
SMC4-211ENST00000469858 USP26Q9BXU7 913 aa22.08■■□□□ 1.13
SMC4-211ENST00000469858 CEP126Q9P2H0 1117 aa22.08■■□□□ 1.13
SMC4-211ENST00000469858 PHF14O94880 888 aa22.08■■□□□ 1.12
SMC4-211ENST00000469858 TBC1D9BQ66K14 1250 aa22.08■■□□□ 1.12
SMC4-211ENST00000469858 ARHGEF1Q92888 912 aaKnown RBP22.08■■□□□ 1.12
SMC4-211ENST00000469858 RGL2O15211 777 aa22.07■■□□□ 1.12
SMC4-211ENST00000469858 EVI5LQ96CN4 794 aa22.07■■□□□ 1.12
SMC4-211ENST00000469858 TIMM10P62072 90 aa22.07■■□□□ 1.12
SMC4-211ENST00000469858 BECN1Q14457 450 aa22.07■■□□□ 1.12
SMC4-211ENST00000469858 LDHAL6AQ6ZMR3 332 aa22.07■■□□□ 1.12
SMC4-211ENST00000469858 CASZ1Q86V15 1759 aa22.06■■□□□ 1.12
SMC4-211ENST00000469858 HSP90B1P14625 803 aaKnown RBP22.06■■□□□ 1.12
SMC4-211ENST00000469858 RXRBP28702 533 aa22.06■■□□□ 1.12
SMC4-211ENST00000469858 UBR3Q6ZT12 1888 aa22.06■■□□□ 1.12
SMC4-211ENST00000469858 RIC1Q4ADV7 1423 aa22.05■■□□□ 1.12
SMC4-211ENST00000469858 A0A1B0GUL7 405 aa22.05■■□□□ 1.12
SMC4-211ENST00000469858 ATP5JP18859 108 aa22.05■■□□□ 1.12
SMC4-211ENST00000469858 CNNM1Q9NRU3 951 aa22.05■■□□□ 1.12
SMC4-211ENST00000469858 SPEF2Q9C093 1822 aa22.05■■□□□ 1.12
SMC4-211ENST00000469858 COL24A1Q17RW2 1714 aa22.05■■□□□ 1.12
SMC4-211ENST00000469858 SLC27A3Q5K4L6 730 aa22.05■■□□□ 1.12
SMC4-211ENST00000469858 KIF2CQ99661 725 aa22.05■■□□□ 1.12
SMC4-211ENST00000469858 LRP5O75197 1615 aa22.04■■□□□ 1.12
SMC4-211ENST00000469858 RFC4P35249 363 aa22.04■■□□□ 1.12
SMC4-211ENST00000469858 TRAPPC3LQ5T215 181 aa22.04■■□□□ 1.12
SMC4-211ENST00000469858 IL25Q9H293 177 aa22.04■■□□□ 1.12
SMC4-211ENST00000469858 DIAPH3Q9NSV4 1193 aa22.04■■□□□ 1.12
SMC4-211ENST00000469858 RIPOR2Q9Y4F9 1068 aa22.04■■□□□ 1.12
SMC4-211ENST00000469858 ERFEQ4G0M1 354 aa22.03■■□□□ 1.12
SMC4-211ENST00000469858 METTL24Q5JXM2 366 aa22.03■■□□□ 1.12
SMC4-211ENST00000469858 ANO2Q9NQ90 1003 aa22.03■■□□□ 1.12
SMC4-211ENST00000469858 CCDC152Q4G0S7 254 aa22.03■■□□□ 1.12
SMC4-211ENST00000469858 SETDB2Q96T68 719 aa22.03■■□□□ 1.12
SMC4-211ENST00000469858 AKAP2Q9Y2D5 859 aa22.03■■□□□ 1.12
SMC4-211ENST00000469858 CWC27Q6UX04 472 aaKnown RBP22.02■■□□□ 1.12
SMC4-211ENST00000469858 TBC1D2Q9BYX2 928 aa22.02■■□□□ 1.12
SMC4-211ENST00000469858 GTF2E1P29083 439 aaPredicted RBP22.01■■□□□ 1.11
SMC4-211ENST00000469858 SEC31BQ9NQW1 1179 aa22.01■■□□□ 1.11
SMC4-211ENST00000469858 SGSM2O43147 1006 aa22.01■■□□□ 1.11
SMC4-211ENST00000469858 EDC3Q96F86 508 aaKnown RBP22.01■■□□□ 1.11
SMC4-211ENST00000469858 DNAJC2Q99543 621 aaKnown RBP22.01■■□□□ 1.11
SMC4-211ENST00000469858 FSD1Q9BTV5 496 aa22.01■■□□□ 1.11
SMC4-211ENST00000469858 NDUFB9Q9Y6M9 179 aa22.01■■□□□ 1.11
SMC4-211ENST00000469858 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.99■■□□□ 1.11
SMC4-211ENST00000469858 NBPF5PQ86XG9 351 aaPredicted RBP21.99■■□□□ 1.11
SMC4-211ENST00000469858 HAUS7Q99871 368 aa21.99■■□□□ 1.11
SMC4-211ENST00000469858 NYXQ9GZU5 481 aa21.99■■□□□ 1.11
SMC4-211ENST00000469858 RTL9Q8NET4 1388 aa21.99■■□□□ 1.11
SMC4-211ENST00000469858 ABCC12Q96J65 1359 aa21.99■■□□□ 1.11
SMC4-211ENST00000469858 ADRA2BP18089 450 aa21.99■■□□□ 1.11
SMC4-211ENST00000469858 ATP2B3Q16720 1220 aa21.99■■□□□ 1.11
SMC4-211ENST00000469858 TXNRD1Q16881 649 aa21.99■■□□□ 1.11
SMC4-211ENST00000469858 RUFY2Q8WXA3 655 aa21.99■■□□□ 1.11
SMC4-211ENST00000469858 ADORA1P30542 326 aa21.98■■□□□ 1.11
SMC4-211ENST00000469858 GORABQ5T7V8 394 aa21.98■■□□□ 1.11
SMC4-211ENST00000469858 XAGE2Q96GT9 111 aa21.98■■□□□ 1.11
SMC4-211ENST00000469858 MPHOSPH8Q99549 860 aa21.98■■□□□ 1.11
SMC4-211ENST00000469858 HIP1O00291 1037 aa21.98■■□□□ 1.11
SMC4-211ENST00000469858 C3orf67Q6ZVT6 689 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms