RNA–Protein interactions for RNA: ENST00000469757.1

TRAPPC3-206, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 221 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-206ENST00000469757 RBM17Q96I25 401 aaKnown RBP10.54□□□□□ -0.72
TRAPPC3-206ENST00000469757 SPEF2Q9C093 1822 aa10.54□□□□□ -0.72
TRAPPC3-206ENST00000469757 TAF1P21675 1872 aa10.53□□□□□ -0.72
TRAPPC3-206ENST00000469757 GRM8O00222 908 aa10.53□□□□□ -0.72
TRAPPC3-206ENST00000469757 GRAPQ13588 217 aa10.53□□□□□ -0.72
TRAPPC3-206ENST00000469757 GRIPAP1Q4V328 841 aa10.53□□□□□ -0.72
TRAPPC3-206ENST00000469757 CCDC93Q567U6 631 aa10.53□□□□□ -0.72
TRAPPC3-206ENST00000469757 GRAPLQ8TC17 118 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC3-206ENST00000469757 SRCIN1Q9C0H9 1055 aa10.53□□□□□ -0.72
TRAPPC3-206ENST00000469757 COL4A5P29400 1685 aa10.53□□□□□ -0.72
TRAPPC3-206ENST00000469757 PPEF1O14829 653 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC3-206ENST00000469757 C21orf2O43822 256 aa10.52□□□□□ -0.73
TRAPPC3-206ENST00000469757 PRELPP51888 382 aa10.52□□□□□ -0.73
TRAPPC3-206ENST00000469757 CCDC152Q4G0S7 254 aa10.52□□□□□ -0.73
TRAPPC3-206ENST00000469757 DDX46Q7L014 1031 aaKnown RBP10.52□□□□□ -0.73
TRAPPC3-206ENST00000469757 PSMD1Q99460 953 aa10.52□□□□□ -0.73
TRAPPC3-206ENST00000469757 API5Q9BZZ5 524 aaKnown RBP10.52□□□□□ -0.73
TRAPPC3-206ENST00000469757 TAOK3Q9H2K8 898 aa10.52□□□□□ -0.73
TRAPPC3-206ENST00000469757 ATP6V0A2Q9Y487 856 aa10.52□□□□□ -0.73
TRAPPC3-206ENST00000469757 BBOX1O75936 387 aa10.51□□□□□ -0.73
TRAPPC3-206ENST00000469757 CSF1RP07333 972 aa10.51□□□□□ -0.73
TRAPPC3-206ENST00000469757 LMNB1P20700 586 aa10.51□□□□□ -0.73
TRAPPC3-206ENST00000469757 CCT4P50991 539 aaKnown RBP10.51□□□□□ -0.73
TRAPPC3-206ENST00000469757 RASSF7Q02833 373 aa10.51□□□□□ -0.73
TRAPPC3-206ENST00000469757 RTKN2Q8IZC4 609 aa10.51□□□□□ -0.73
TRAPPC3-206ENST00000469757 TRIM27P14373 513 aa10.5□□□□□ -0.73
TRAPPC3-206ENST00000469757 YY1P25490 414 aa10.5□□□□□ -0.73
TRAPPC3-206ENST00000469757 FKBP4Q02790 459 aaKnown RBP eCLIP10.5□□□□□ -0.73
TRAPPC3-206ENST00000469757 RTL5Q5HYW3 569 aaPredicted RBP10.5□□□□□ -0.73
TRAPPC3-206ENST00000469757 ARHGAP27Q6ZUM4 889 aa10.5□□□□□ -0.73
TRAPPC3-206ENST00000469757 SLC51AQ86UW1 340 aa10.5□□□□□ -0.73
TRAPPC3-206ENST00000469757 TTLL11Q8NHH1 800 aa10.5□□□□□ -0.73
TRAPPC3-206ENST00000469757 RTFDC1Q9BY42 306 aaPredicted RBP10.5□□□□□ -0.73
TRAPPC3-206ENST00000469757 NOB1Q9ULX3 412 aaKnown RBP10.5□□□□□ -0.73
TRAPPC3-206ENST00000469757 CCDC88AQ3V6T2 1871 aa10.5□□□□□ -0.73
TRAPPC3-206ENST00000469757 WDR90Q96KV7 1748 aa10.5□□□□□ -0.73
TRAPPC3-206ENST00000469757 BCAR3O75815 825 aa10.49□□□□□ -0.73
TRAPPC3-206ENST00000469757 FOXO4P98177 505 aa10.49□□□□□ -0.73
TRAPPC3-206ENST00000469757 RABL6Q3YEC7 729 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC3-206ENST00000469757 INTS3Q68E01 1043 aaKnown RBP10.49□□□□□ -0.73
TRAPPC3-206ENST00000469757 SLC4A10Q6U841 1118 aa10.49□□□□□ -0.73
TRAPPC3-206ENST00000469757 OLFM4Q6UX06 510 aa10.49□□□□□ -0.73
TRAPPC3-206ENST00000469757 ATF7IPQ6VMQ6 1270 aa10.49□□□□□ -0.73
TRAPPC3-206ENST00000469757 SP8Q8IXZ3 490 aa10.49□□□□□ -0.73
TRAPPC3-206ENST00000469757 CELF1Q92879 486 aaKnown RBP10.49□□□□□ -0.73
TRAPPC3-206ENST00000469757 KAZALD1Q96I82 304 aa10.49□□□□□ -0.73
TRAPPC3-206ENST00000469757 ZNF646O15015 1829 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC3-206ENST00000469757 IPO8O15397 1037 aaKnown RBP10.48□□□□□ -0.73
TRAPPC3-206ENST00000469757 NBPF7P0C2Y1 421 aaPredicted RBP10.48□□□□□ -0.73
TRAPPC3-206ENST00000469757 FAM161AQ3B820 660 aa10.48□□□□□ -0.73
TRAPPC3-206ENST00000469757 C9orf131Q5VYM1 1079 aa10.48□□□□□ -0.73
TRAPPC3-206ENST00000469757 JARID2Q92833 1246 aaPredicted RBP10.48□□□□□ -0.73
TRAPPC3-206ENST00000469757 CDC5LQ99459 802 aaKnown RBP10.48□□□□□ -0.73
TRAPPC3-206ENST00000469757 USP44Q9H0E7 712 aa10.48□□□□□ -0.73
TRAPPC3-206ENST00000469757 GREM2Q9H772 168 aa10.48□□□□□ -0.73
TRAPPC3-206ENST00000469757 RNF181Q9P0P0 153 aa10.48□□□□□ -0.73
TRAPPC3-206ENST00000469757 PSME4Q14997 1843 aa10.48□□□□□ -0.73
TRAPPC3-206ENST00000469757 RPS8P62241 208 aaKnown RBP10.47□□□□□ -0.73
TRAPPC3-206ENST00000469757 EPHA10Q5JZY3 1008 aa10.47□□□□□ -0.73
TRAPPC3-206ENST00000469757 ZKSCAN2Q63HK3 967 aa10.47□□□□□ -0.73
TRAPPC3-206ENST00000469757 ANKRD44Q8N8A2 993 aa10.47□□□□□ -0.73
TRAPPC3-206ENST00000469757 ZNF784Q8NCA9 323 aaPredicted RBP10.47□□□□□ -0.73
TRAPPC3-206ENST00000469757 VPS33BQ9H267 617 aa10.47□□□□□ -0.73
TRAPPC3-206ENST00000469757 SEC31BQ9NQW1 1179 aa10.47□□□□□ -0.73
TRAPPC3-206ENST00000469757 PODXL2Q9NZ53 605 aa10.47□□□□□ -0.73
TRAPPC3-206ENST00000469757 C9orf78Q9NZ63 289 aaPredicted RBP10.47□□□□□ -0.73
TRAPPC3-206ENST00000469757 ZNF609O15014 1411 aa10.47□□□□□ -0.73
TRAPPC3-206ENST00000469757 ITGA6P23229 1130 aa10.46□□□□□ -0.73
TRAPPC3-206ENST00000469757 IARSP41252 1262 aaKnown RBP10.46□□□□□ -0.73
TRAPPC3-206ENST00000469757 SUCLG2Q96I99 432 aa10.46□□□□□ -0.73
TRAPPC3-206ENST00000469757 BSDC1Q9NW68 430 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC3-206ENST00000469757 ZNF219Q9P2Y4 722 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC3-206ENST00000469757 XDHP47989 1333 aa10.45□□□□□ -0.74
TRAPPC3-206ENST00000469757 ANKRD18AQ8IVF6 992 aa10.45□□□□□ -0.74
TRAPPC3-206ENST00000469757 SUPT20HQ8NEM7 779 aa10.45□□□□□ -0.74
TRAPPC3-206ENST00000469757 ZNF277Q9NRM2 450 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC3-206ENST00000469757 RCAN3Q9UKA8 241 aa10.45□□□□□ -0.74
TRAPPC3-206ENST00000469757 ADAMTSL1Q8N6G6 1762 aa10.44□□□□□ -0.74
TRAPPC3-206ENST00000469757 ARAP2Q8WZ64 1704 aa10.44□□□□□ -0.74
TRAPPC3-206ENST00000469757 MED23Q9ULK4 1368 aa10.44□□□□□ -0.74
TRAPPC3-206ENST00000469757 KIAA2012Q0VF49 1180 aa10.44□□□□□ -0.74
TRAPPC3-206ENST00000469757 LMBR1LQ6UX01 489 aa10.44□□□□□ -0.74
TRAPPC3-206ENST00000469757 DPP8Q6V1X1 898 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC3-206ENST00000469757 MPNDQ8N594 471 aa10.44□□□□□ -0.74
TRAPPC3-206ENST00000469757 MEIS3Q99687 375 aa10.44□□□□□ -0.74
TRAPPC3-206ENST00000469757 TMX4Q9H1E5 349 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC3-206ENST00000469757 BICC1Q9H694 974 aaKnown RBP10.44□□□□□ -0.74
TRAPPC3-206ENST00000469757 TNNQ9UQP3 1299 aa10.44□□□□□ -0.74
TRAPPC3-206ENST00000469757 SCN4AP35499 1836 aa10.44□□□□□ -0.74
TRAPPC3-206ENST00000469757 ANKRD18BA2A2Z9 1011 aa10.43□□□□□ -0.74
TRAPPC3-206ENST00000469757 FZD9O00144 591 aa10.43□□□□□ -0.74
TRAPPC3-206ENST00000469757 UBTFL1P0CB47 393 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC3-206ENST00000469757 RLBP1P12271 317 aa10.43□□□□□ -0.74
TRAPPC3-206ENST00000469757 GPSM2P81274 684 aa10.43□□□□□ -0.74
TRAPPC3-206ENST00000469757 IFIT5Q13325 482 aaKnown RBP10.43□□□□□ -0.74
TRAPPC3-206ENST00000469757 MTX1Q13505 466 aa10.43□□□□□ -0.74
TRAPPC3-206ENST00000469757 FRAT1Q92837 279 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC3-206ENST00000469757 L3MBTL3Q96JM7 780 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC3-206ENST00000469757 CCDC85AQ96PX6 553 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC3-206ENST00000469757 MINPP1Q9UNW1 487 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms