RNA–Protein interactions for RNA: ENST00000469653.5

SEMA4D-215, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 3,533 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-215ENST00000469653 KIF6Q6ZMV9 814 aa12.13□□□□□ -0.47
SEMA4D-215ENST00000469653 PNPLA7Q6ZV29 1317 aa12.13□□□□□ -0.47
SEMA4D-215ENST00000469653 VGLL3A8MV65 326 aa12.13□□□□□ -0.47
SEMA4D-215ENST00000469653 SLC4A10Q6U841 1118 aa12.13□□□□□ -0.47
SEMA4D-215ENST00000469653 KIF16BQ96L93 1317 aa12.13□□□□□ -0.47
SEMA4D-215ENST00000469653 SKOR2Q2VWA4 1001 aaPredicted RBP12.12□□□□□ -0.47
SEMA4D-215ENST00000469653 COL23A1Q86Y22 540 aaPredicted RBP12.12□□□□□ -0.47
SEMA4D-215ENST00000469653 RNF214Q8ND24 703 aa12.12□□□□□ -0.47
SEMA4D-215ENST00000469653 ZBTB3Q9H5J0 574 aa12.12□□□□□ -0.47
SEMA4D-215ENST00000469653 AK9Q5TCS8 1911 aa12.12□□□□□ -0.47
SEMA4D-215ENST00000469653 NUP98P52948 1817 aa12.12□□□□□ -0.47
SEMA4D-215ENST00000469653 BMP2KLQ5H9B9 411 aa12.12□□□□□ -0.47
SEMA4D-215ENST00000469653 ANKRD13DQ6ZTN6 518 aa12.12□□□□□ -0.47
SEMA4D-215ENST00000469653 FLAD1Q8NFF5 587 aa12.12□□□□□ -0.47
SEMA4D-215ENST00000469653 SRP68Q9UHB9 627 aaKnown RBP12.12□□□□□ -0.47
SEMA4D-215ENST00000469653 ARFGEF2Q9Y6D5 1785 aa12.12□□□□□ -0.47
SEMA4D-215ENST00000469653 BCORQ6W2J9 1755 aa12.12□□□□□ -0.47
SEMA4D-215ENST00000469653 ZPR1O75312 459 aa12.12□□□□□ -0.47
SEMA4D-215ENST00000469653 DDX58O95786 925 aaKnown RBP12.12□□□□□ -0.47
SEMA4D-215ENST00000469653 PPP1R9BQ96SB3 815 aa12.12□□□□□ -0.47
SEMA4D-215ENST00000469653 PTPRCP08575 1304 aa12.12□□□□□ -0.47
SEMA4D-215ENST00000469653 PI4KAP2A4QPH2 592 aa12.11□□□□□ -0.47
SEMA4D-215ENST00000469653 RIC3Q7Z5B4 369 aa12.11□□□□□ -0.47
SEMA4D-215ENST00000469653 PI4KAP1Q8N8J0 262 aa12.11□□□□□ -0.47
SEMA4D-215ENST00000469653 MAP3K15Q6ZN16 1313 aa12.11□□□□□ -0.47
SEMA4D-215ENST00000469653 CHRM1P11229 460 aaPredicted RBP12.11□□□□□ -0.47
SEMA4D-215ENST00000469653 ANKRD45Q5TZF3 282 aa12.11□□□□□ -0.47
SEMA4D-215ENST00000469653 PLBD2Q8NHP8 589 aa12.11□□□□□ -0.47
SEMA4D-215ENST00000469653 NARFQ9UHQ1 456 aa12.11□□□□□ -0.47
SEMA4D-215ENST00000469653 K7ELQ4 463 aaPredicted RBP12.11□□□□□ -0.47
SEMA4D-215ENST00000469653 IPO8O15397 1037 aaKnown RBP12.11□□□□□ -0.47
SEMA4D-215ENST00000469653 CAMTA2O94983 1202 aa12.11□□□□□ -0.47
SEMA4D-215ENST00000469653 R3HDM1Q15032 1099 aaKnown RBP12.11□□□□□ -0.47
SEMA4D-215ENST00000469653 USPL1Q5W0Q7 1092 aa12.11□□□□□ -0.47
SEMA4D-215ENST00000469653 KSR2Q6VAB6 950 aa12.11□□□□□ -0.47
SEMA4D-215ENST00000469653 KIAA1211Q6ZU35 1233 aa12.11□□□□□ -0.47
SEMA4D-215ENST00000469653 MAP3K2Q9Y2U5 619 aa12.11□□□□□ -0.47
SEMA4D-215ENST00000469653 ADCY9O60503 1353 aa12.1□□□□□ -0.47
SEMA4D-215ENST00000469653 SCN7AQ01118 1682 aa12.1□□□□□ -0.47
SEMA4D-215ENST00000469653 F6X3S4 739 aa12.1□□□□□ -0.47
SEMA4D-215ENST00000469653 HLFQ16534 295 aa12.1□□□□□ -0.47
SEMA4D-215ENST00000469653 TBC1D9Q6ZT07 1266 aa12.1□□□□□ -0.47
SEMA4D-215ENST00000469653 USP42Q9H9J4 1324 aaKnown RBP12.1□□□□□ -0.47
SEMA4D-215ENST00000469653 TPM2P07951 284 aa12.1□□□□□ -0.47
SEMA4D-215ENST00000469653 NASPP49321 788 aaPredicted RBP12.1□□□□□ -0.47
SEMA4D-215ENST00000469653 PDGFDQ9GZP0 370 aaPredicted RBP12.1□□□□□ -0.47
SEMA4D-215ENST00000469653 ERVV-1B6SEH8 477 aa12.1□□□□□ -0.47
SEMA4D-215ENST00000469653 CCDC173Q0VFZ6 552 aa12.1□□□□□ -0.47
SEMA4D-215ENST00000469653 ARHGAP45Q92619 1136 aa12.1□□□□□ -0.47
SEMA4D-215ENST00000469653 PSDA5PKW4 1024 aaPredicted RBP12.09□□□□□ -0.47
SEMA4D-215ENST00000469653 API5Q9BZZ5 524 aaKnown RBP12.09□□□□□ -0.47
SEMA4D-215ENST00000469653 BAG4O95429 457 aaKnown RBP12.08□□□□□ -0.47
SEMA4D-215ENST00000469653 CLEC17AQ6ZS10 378 aa12.08□□□□□ -0.47
SEMA4D-215ENST00000469653 DNAAF4Q8WXU2 420 aa12.08□□□□□ -0.47
SEMA4D-215ENST00000469653 BCL2L12Q9HB09 334 aa12.08□□□□□ -0.47
SEMA4D-215ENST00000469653 ANKRD36CQ5JPF3 1778 aa12.08□□□□□ -0.48
SEMA4D-215ENST00000469653 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.08□□□□□ -0.48
SEMA4D-215ENST00000469653 GIGYF2Q6Y7W6 1299 aaKnown RBP12.08□□□□□ -0.48
SEMA4D-215ENST00000469653 ZSCAN30Q86W11 494 aa12.08□□□□□ -0.48
SEMA4D-215ENST00000469653 GYS1P13807 737 aa12.08□□□□□ -0.48
SEMA4D-215ENST00000469653 KLHL40Q2TBA0 621 aa12.08□□□□□ -0.48
SEMA4D-215ENST00000469653 METTL22Q9BUU2 404 aaPredicted RBP12.08□□□□□ -0.48
SEMA4D-215ENST00000469653 ZNF652Q9Y2D9 606 aa12.08□□□□□ -0.48
SEMA4D-215ENST00000469653 AFDNP55196 1824 aaKnown RBP12.08□□□□□ -0.48
SEMA4D-215ENST00000469653 MYD88Q99836 296 aa12.07□□□□□ -0.48
SEMA4D-215ENST00000469653 DDX49Q9Y6V7 483 aaKnown RBP12.07□□□□□ -0.48
SEMA4D-215ENST00000469653 FAM177BA6PVY3 158 aa12.07□□□□□ -0.48
SEMA4D-215ENST00000469653 ZBTB7BO15156 539 aaPredicted RBP12.07□□□□□ -0.48
SEMA4D-215ENST00000469653 CLEC4GQ6UXB4 293 aa12.07□□□□□ -0.48
SEMA4D-215ENST00000469653 SIRT2Q8IXJ6 389 aa12.07□□□□□ -0.48
SEMA4D-215ENST00000469653 CASZ1Q86V15 1759 aa12.07□□□□□ -0.48
SEMA4D-215ENST00000469653 OFD1O75665 1012 aa12.07□□□□□ -0.48
SEMA4D-215ENST00000469653 R3HCC1Q9Y3T6 440 aaKnown RBP12.07□□□□□ -0.48
SEMA4D-215ENST00000469653 ATP5J2-PTCD1G3V325 749 aa12.06□□□□□ -0.48
SEMA4D-215ENST00000469653 TCIRG1Q13488 830 aa12.06□□□□□ -0.48
SEMA4D-215ENST00000469653 BICDL1Q6ZP65 573 aa12.06□□□□□ -0.48
SEMA4D-215ENST00000469653 IBTKQ9P2D0 1353 aaPredicted RBP12.06□□□□□ -0.48
SEMA4D-215ENST00000469653 GPTP24298 496 aa12.06□□□□□ -0.48
SEMA4D-215ENST00000469653 NEXNQ0ZGT2 675 aa12.06□□□□□ -0.48
SEMA4D-215ENST00000469653 DNTTIP2Q5QJE6 756 aaKnown RBP12.06□□□□□ -0.48
SEMA4D-215ENST00000469653 TBC1D9BQ66K14 1250 aa12.06□□□□□ -0.48
SEMA4D-215ENST00000469653 MSL1Q68DK7 614 aa12.06□□□□□ -0.48
SEMA4D-215ENST00000469653 PDCL3Q9H2J4 239 aa12.06□□□□□ -0.48
SEMA4D-215ENST00000469653 HSP90AB3PQ58FF7 597 aa12.06□□□□□ -0.48
SEMA4D-215ENST00000469653 ANP32BQ92688 251 aaKnown RBP12.06□□□□□ -0.48
SEMA4D-215ENST00000469653 ABCC4O15439 1325 aa12.05□□□□□ -0.48
SEMA4D-215ENST00000469653 MYCNP04198 464 aaPredicted RBP12.05□□□□□ -0.48
SEMA4D-215ENST00000469653 NIP7Q9Y221 180 aaKnown RBP eCLIP12.05□□□□□ -0.48
SEMA4D-215ENST00000469653 RGL2O15211 777 aa12.05□□□□□ -0.48
SEMA4D-215ENST00000469653 PKP1Q13835 747 aa12.05□□□□□ -0.48
SEMA4D-215ENST00000469653 CWF19L2Q2TBE0 894 aaKnown RBP12.05□□□□□ -0.48
SEMA4D-215ENST00000469653 BEND3Q5T5X7 828 aa12.05□□□□□ -0.48
SEMA4D-215ENST00000469653 N4BP2Q86UW6 1770 aaPredicted RBP12.05□□□□□ -0.48
SEMA4D-215ENST00000469653 IGKV5-2P06315 115 aa12.04□□□□□ -0.48
SEMA4D-215ENST00000469653 MCTP1Q6DN14 999 aa12.04□□□□□ -0.48
SEMA4D-215ENST00000469653 ZNF34Q8IZ26 560 aa12.04□□□□□ -0.48
SEMA4D-215ENST00000469653 NLGN1Q8N2Q7 840 aa12.04□□□□□ -0.48
SEMA4D-215ENST00000469653 DNAJC2Q99543 621 aaKnown RBP12.04□□□□□ -0.48
SEMA4D-215ENST00000469653 GRIPAP1Q4V328 841 aa12.04□□□□□ -0.48
SEMA4D-215ENST00000469653 HDAC5Q9UQL6 1122 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms