RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 CDHR2Q9BYE9 1310 aa14.2□□□□□ -0.14
COL4A3-204ENST00000469504 HCLS1P14317 486 aaPredicted RBP14.2□□□□□ -0.14
COL4A3-204ENST00000469504 ZEB1P37275 1124 aaPredicted RBP14.2□□□□□ -0.14
COL4A3-204ENST00000469504 GOLGA2Q08379 1002 aa14.2□□□□□ -0.14
COL4A3-204ENST00000469504 SF3B3Q15393 1217 aaKnown RBP14.2□□□□□ -0.14
COL4A3-204ENST00000469504 DPP8Q6V1X1 898 aaPredicted RBP14.2□□□□□ -0.14
COL4A3-204ENST00000469504 MPNDQ8N594 471 aa14.2□□□□□ -0.14
COL4A3-204ENST00000469504 CLEC11AQ9Y240 323 aa14.2□□□□□ -0.14
COL4A3-204ENST00000469504 ADAMTSL1Q8N6G6 1762 aa14.19□□□□□ -0.14
COL4A3-204ENST00000469504 TMEM88BA6NKF7 163 aa14.19□□□□□ -0.14
COL4A3-204ENST00000469504 ITGBL1O95965 494 aaPredicted RBP14.19□□□□□ -0.14
COL4A3-204ENST00000469504 KIAA2012Q0VF49 1180 aa14.19□□□□□ -0.14
COL4A3-204ENST00000469504 USP50Q70EL3 339 aaPredicted RBP14.19□□□□□ -0.14
COL4A3-204ENST00000469504 ZNRF3Q9ULT6 936 aa14.19□□□□□ -0.14
COL4A3-204ENST00000469504 GJA3Q9Y6H8 435 aa14.19□□□□□ -0.14
COL4A3-204ENST00000469504 PCNTO95613 3336 aa14.19□□□□□ -0.14
COL4A3-204ENST00000469504 CNTNAP1P78357 1384 aa14.19□□□□□ -0.14
COL4A3-204ENST00000469504 TCERG1O14776 1098 aaKnown RBP14.18□□□□□ -0.14
COL4A3-204ENST00000469504 DDX58O95786 925 aaKnown RBP14.18□□□□□ -0.14
COL4A3-204ENST00000469504 SCNN1DP51172 638 aa14.18□□□□□ -0.14
COL4A3-204ENST00000469504 AOC3Q16853 763 aa14.18□□□□□ -0.14
COL4A3-204ENST00000469504 CCDC27Q2M243 656 aa14.18□□□□□ -0.14
COL4A3-204ENST00000469504 RIC3Q7Z5B4 369 aa14.18□□□□□ -0.14
COL4A3-204ENST00000469504 CNTROBQ8N137 903 aa14.18□□□□□ -0.14
COL4A3-204ENST00000469504 COL4A5P29400 1685 aa14.17□□□□□ -0.14
COL4A3-204ENST00000469504 TNIP1Q15025 636 aa14.17□□□□□ -0.14
COL4A3-204ENST00000469504 CCDC30Q5VVM6 783 aa14.17□□□□□ -0.14
COL4A3-204ENST00000469504 ZBTB38Q8NAP3 1195 aaPredicted RBP14.17□□□□□ -0.14
COL4A3-204ENST00000469504 HSPA1AP0DMV8 641 aaKnown RBP14.16□□□□□ -0.14
COL4A3-204ENST00000469504 HSPA1BP0DMV9 641 aaKnown RBP14.16□□□□□ -0.14
COL4A3-204ENST00000469504 CCDC191Q8NCU4 936 aa14.16□□□□□ -0.14
COL4A3-204ENST00000469504 FAM89AQ96GI7 184 aa14.16□□□□□ -0.14
COL4A3-204ENST00000469504 ADARB2Q9NS39 739 aaKnown RBP14.16□□□□□ -0.14
COL4A3-204ENST00000469504 ATP5J2-PTCD1G3V325 749 aa14.15□□□□□ -0.14
COL4A3-204ENST00000469504 IRS4O14654 1257 aaPredicted RBP14.15□□□□□ -0.14
COL4A3-204ENST00000469504 CIAPIN1Q6FI81 312 aa14.15□□□□□ -0.14
COL4A3-204ENST00000469504 GPRC5DQ9NZD1 345 aa14.15□□□□□ -0.14
COL4A3-204ENST00000469504 MKRN1Q9UHC7 482 aaKnown RBP14.15□□□□□ -0.14
COL4A3-204ENST00000469504 RASSF10A6NK89 507 aa14.14□□□□□ -0.15
COL4A3-204ENST00000469504 EPS15P42566 896 aa14.14□□□□□ -0.15
COL4A3-204ENST00000469504 CXCL9Q07325 125 aa14.14□□□□□ -0.15
COL4A3-204ENST00000469504 MAP1SQ66K74 1059 aaPredicted RBP14.14□□□□□ -0.15
COL4A3-204ENST00000469504 EYA3Q99504 573 aa14.14□□□□□ -0.15
COL4A3-204ENST00000469504 LAMB2P55268 1798 aa14.14□□□□□ -0.15
COL4A3-204ENST00000469504 IL16Q14005 1332 aa14.14□□□□□ -0.15
COL4A3-204ENST00000469504 LRRC37AA6NMS7 1700 aa14.13□□□□□ -0.15
COL4A3-204ENST00000469504 PCCAP05165 728 aaPredicted RBP14.13□□□□□ -0.15
COL4A3-204ENST00000469504 DSG3P32926 999 aa14.13□□□□□ -0.15
COL4A3-204ENST00000469504 WASHC4Q2M389 1173 aa14.13□□□□□ -0.15
COL4A3-204ENST00000469504 ZC3H15Q8WU90 426 aaKnown RBP14.13□□□□□ -0.15
COL4A3-204ENST00000469504 PHAXQ9H814 394 aaKnown RBP14.13□□□□□ -0.15
COL4A3-204ENST00000469504 RPS8P62241 208 aaKnown RBP14.12□□□□□ -0.15
COL4A3-204ENST00000469504 CCDC152Q4G0S7 254 aa14.12□□□□□ -0.15
COL4A3-204ENST00000469504 C8orf58Q8NAV2 365 aa14.12□□□□□ -0.15
COL4A3-204ENST00000469504 CELF1Q92879 486 aaKnown RBP14.12□□□□□ -0.15
COL4A3-204ENST00000469504 METTL22Q9BUU2 404 aaPredicted RBP14.12□□□□□ -0.15
COL4A3-204ENST00000469504 BCL2L13Q9BXK5 485 aa14.12□□□□□ -0.15
COL4A3-204ENST00000469504 STK31Q9BXU1 1019 aa14.12□□□□□ -0.15
COL4A3-204ENST00000469504 CWC25Q9NXE8 425 aaPredicted RBP14.12□□□□□ -0.15
COL4A3-204ENST00000469504 NSFL1CQ9UNZ2 370 aaKnown RBP14.12□□□□□ -0.15
COL4A3-204ENST00000469504 LTBP1Q14766 1721 aa14.12□□□□□ -0.15
COL4A3-204ENST00000469504 DDX60Q8IY21 1712 aaKnown RBP14.12□□□□□ -0.15
COL4A3-204ENST00000469504 ELL2O00472 640 aaPredicted RBP14.11□□□□□ -0.15
COL4A3-204ENST00000469504 PDE8AO60658 829 aa14.11□□□□□ -0.15
COL4A3-204ENST00000469504 GMPSP49915 693 aaPredicted RBP14.11□□□□□ -0.15
COL4A3-204ENST00000469504 DEFB115Q30KQ5 88 aa14.11□□□□□ -0.15
COL4A3-204ENST00000469504 COL13A1Q5TAT6 717 aaPredicted RBP14.11□□□□□ -0.15
COL4A3-204ENST00000469504 SAMD1Q6SPF0 538 aaPredicted RBP14.11□□□□□ -0.15
COL4A3-204ENST00000469504 SLC51AQ86UW1 340 aa14.11□□□□□ -0.15
COL4A3-204ENST00000469504 WWC1Q8IX03 1113 aa14.11□□□□□ -0.15
COL4A3-204ENST00000469504 DPF2Q92785 391 aa14.11□□□□□ -0.15
COL4A3-204ENST00000469504 MYD88Q99836 296 aa14.11□□□□□ -0.15
COL4A3-204ENST00000469504 DUOX1Q9NRD9 1551 aa14.11□□□□□ -0.15
COL4A3-204ENST00000469504 PODXL2Q9NZ53 605 aa14.11□□□□□ -0.15
COL4A3-204ENST00000469504 PGAP2Q9UHJ9 254 aa14.11□□□□□ -0.15
COL4A3-204ENST00000469504 H7C1D1 291 aa14.1□□□□□ -0.15
COL4A3-204ENST00000469504 RPS12P25398 132 aaKnown RBP14.1□□□□□ -0.15
COL4A3-204ENST00000469504 VEGFBP49765 207 aa14.1□□□□□ -0.15
COL4A3-204ENST00000469504 NEXNQ0ZGT2 675 aa14.1□□□□□ -0.15
COL4A3-204ENST00000469504 KSR2Q6VAB6 950 aa14.1□□□□□ -0.15
COL4A3-204ENST00000469504 AIDAQ96BJ3 306 aa14.1□□□□□ -0.15
COL4A3-204ENST00000469504 ABT1Q9ULW3 272 aaKnown RBP14.1□□□□□ -0.15
COL4A3-204ENST00000469504 ANP32CO43423 234 aa14.09□□□□□ -0.15
COL4A3-204ENST00000469504 ECE1P42892 770 aa14.09□□□□□ -0.15
COL4A3-204ENST00000469504 MAP2K1Q02750 393 aaPredicted RBP14.09□□□□□ -0.15
COL4A3-204ENST00000469504 TNS4Q8IZW8 715 aa14.09□□□□□ -0.15
COL4A3-204ENST00000469504 YDJCA8MPS7 323 aa14.08□□□□□ -0.16
COL4A3-204ENST00000469504 C6orf229H3BNL8 230 aa14.08□□□□□ -0.16
COL4A3-204ENST00000469504 RAD17O75943 681 aa14.08□□□□□ -0.16
COL4A3-204ENST00000469504 GPSM2P81274 684 aa14.08□□□□□ -0.16
COL4A3-204ENST00000469504 TWISTNBQ3B726 338 aaPredicted RBP14.08□□□□□ -0.16
COL4A3-204ENST00000469504 RTL5Q5HYW3 569 aaPredicted RBP14.08□□□□□ -0.16
COL4A3-204ENST00000469504 HHIPL1Q96JK4 782 aa14.08□□□□□ -0.16
COL4A3-204ENST00000469504 CDC5LQ99459 802 aaKnown RBP14.08□□□□□ -0.16
COL4A3-204ENST00000469504 ZC3H12CQ9C0D7 883 aaKnown RBP14.08□□□□□ -0.16
COL4A3-204ENST00000469504 PRDM10Q9NQV6 1147 aa14.08□□□□□ -0.16
COL4A3-204ENST00000469504 POLLQ9UGP5 575 aa14.08□□□□□ -0.16
COL4A3-204ENST00000469504 CNOT7Q9UIV1 285 aaKnown RBP14.08□□□□□ -0.16
COL4A3-204ENST00000469504 MAP3K2Q9Y2U5 619 aa14.08□□□□□ -0.16
COL4A3-204ENST00000469504 CTCFP49711 727 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms