RNA–Protein interactions for RNA: ENST00000469414.1

CIT-204, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-204ENST00000469414 ZNF541Q9H0D2 1346 aa12.46□□□□□ -0.41
CIT-204ENST00000469414 FANCIQ9NVI1 1328 aa12.46□□□□□ -0.41
CIT-204ENST00000469414 TNRC6CQ9HCJ0 1690 aaKnown RBP12.46□□□□□ -0.41
CIT-204ENST00000469414 EXOSC9Q06265 439 aaKnown RBP12.46□□□□□ -0.41
CIT-204ENST00000469414 SF3B3Q15393 1217 aaKnown RBP12.46□□□□□ -0.41
CIT-204ENST00000469414 KSR2Q6VAB6 950 aa12.46□□□□□ -0.41
CIT-204ENST00000469414 NIM1KQ8IY84 436 aa12.46□□□□□ -0.41
CIT-204ENST00000469414 SBF1O95248 1867 aa12.45□□□□□ -0.42
CIT-204ENST00000469414 FZD9O00144 591 aa12.45□□□□□ -0.42
CIT-204ENST00000469414 AOC3Q16853 763 aa12.45□□□□□ -0.42
CIT-204ENST00000469414 EAPPQ56P03 285 aaPredicted RBP12.45□□□□□ -0.42
CIT-204ENST00000469414 G2E3Q7L622 706 aa12.45□□□□□ -0.42
CIT-204ENST00000469414 TMC4Q7Z404 712 aa12.45□□□□□ -0.42
CIT-204ENST00000469414 MYH16Q9H6N6 1097 aa12.45□□□□□ -0.42
CIT-204ENST00000469414 CLEC11AQ9Y240 323 aa12.45□□□□□ -0.42
CIT-204ENST00000469414 PCCAP05165 728 aaPredicted RBP12.44□□□□□ -0.42
CIT-204ENST00000469414 HTRA3P83110 453 aa12.44□□□□□ -0.42
CIT-204ENST00000469414 FKBP5Q13451 457 aaPredicted RBP12.44□□□□□ -0.42
CIT-204ENST00000469414 GPC2Q8N158 579 aa12.44□□□□□ -0.42
CIT-204ENST00000469414 CELF1Q92879 486 aaKnown RBP12.44□□□□□ -0.42
CIT-204ENST00000469414 CCDC85AQ96PX6 553 aaPredicted RBP12.44□□□□□ -0.42
CIT-204ENST00000469414 TAF1DQ9H5J8 278 aaPredicted RBP12.44□□□□□ -0.42
CIT-204ENST00000469414 HACL1Q9UJ83 578 aa12.44□□□□□ -0.42
CIT-204ENST00000469414 NSFL1CQ9UNZ2 370 aaKnown RBP12.44□□□□□ -0.42
CIT-204ENST00000469414 FER1L6Q2WGJ9 1857 aa12.43□□□□□ -0.42
CIT-204ENST00000469414 C6orf229H3BNL8 230 aa12.43□□□□□ -0.42
CIT-204ENST00000469414 PDE8AO60658 829 aa12.43□□□□□ -0.42
CIT-204ENST00000469414 VAMP4O75379 141 aa12.43□□□□□ -0.42
CIT-204ENST00000469414 LMOD1P29536 600 aaPredicted RBP12.43□□□□□ -0.42
CIT-204ENST00000469414 RPS8P62241 208 aaKnown RBP12.43□□□□□ -0.42
CIT-204ENST00000469414 FLIIQ13045 1269 aa12.43□□□□□ -0.42
CIT-204ENST00000469414 CCDC152Q4G0S7 254 aa12.43□□□□□ -0.42
CIT-204ENST00000469414 CHADLQ6NUI6 762 aa12.43□□□□□ -0.42
CIT-204ENST00000469414 L3MBTL3Q96JM7 780 aaPredicted RBP12.43□□□□□ -0.42
CIT-204ENST00000469414 VPS33BQ9H267 617 aa12.43□□□□□ -0.42
CIT-204ENST00000469414 CACNA1SQ13698 1873 aa12.42□□□□□ -0.42
CIT-204ENST00000469414 IGKV5-2P06315 115 aa12.42□□□□□ -0.42
CIT-204ENST00000469414 POTEIP0CG38 1075 aa12.42□□□□□ -0.42
CIT-204ENST00000469414 POTEJP0CG39 1038 aa12.42□□□□□ -0.42
CIT-204ENST00000469414 EPHX2P34913 555 aa12.42□□□□□ -0.42
CIT-204ENST00000469414 CWF19L2Q2TBE0 894 aaKnown RBP12.42□□□□□ -0.42
CIT-204ENST00000469414 RTFDC1Q9BY42 306 aaPredicted RBP12.42□□□□□ -0.42
CIT-204ENST00000469414 SPINK5Q9NQ38 1064 aaPredicted RBP12.42□□□□□ -0.42
CIT-204ENST00000469414 RIMBP2O15034 1052 aa12.41□□□□□ -0.42
CIT-204ENST00000469414 PNMA8AQ86V59 439 aaPredicted RBP12.41□□□□□ -0.42
CIT-204ENST00000469414 LDHDQ86WU2 507 aa12.41□□□□□ -0.42
CIT-204ENST00000469414 TIAM2Q8IVF5 1701 aa12.41□□□□□ -0.42
CIT-204ENST00000469414 SNED1Q8TER0 1413 aa12.41□□□□□ -0.42
CIT-204ENST00000469414 SEC31BQ9NQW1 1179 aa12.41□□□□□ -0.42
CIT-204ENST00000469414 ZNRF3Q9ULT6 936 aa12.41□□□□□ -0.42
CIT-204ENST00000469414 ARFGEF2Q9Y6D5 1785 aa12.41□□□□□ -0.42
CIT-204ENST00000469414 NEURL1BA8MQ27 555 aa12.4□□□□□ -0.42
CIT-204ENST00000469414 G3V3G9 751 aa12.4□□□□□ -0.42
CIT-204ENST00000469414 GPSM2P81274 684 aa12.4□□□□□ -0.42
CIT-204ENST00000469414 KIAA2012Q0VF49 1180 aa12.4□□□□□ -0.42
CIT-204ENST00000469414 WASHC4Q2M389 1173 aa12.4□□□□□ -0.42
CIT-204ENST00000469414 DCAF8Q5TAQ9 597 aa12.4□□□□□ -0.42
CIT-204ENST00000469414 ANKRD18AQ8IVF6 992 aa12.4□□□□□ -0.42
CIT-204ENST00000469414 DNAAF4Q8WXU2 420 aa12.4□□□□□ -0.42
CIT-204ENST00000469414 ANKIB1Q9P2G1 1089 aa12.4□□□□□ -0.42
CIT-204ENST00000469414 RAD17O75943 681 aa12.39□□□□□ -0.43
CIT-204ENST00000469414 CTSWP56202 376 aa12.39□□□□□ -0.43
CIT-204ENST00000469414 CXCL9Q07325 125 aa12.39□□□□□ -0.43
CIT-204ENST00000469414 TNIP1Q15025 636 aa12.39□□□□□ -0.43
CIT-204ENST00000469414 CIAPIN1Q6FI81 312 aa12.39□□□□□ -0.43
CIT-204ENST00000469414 UBE3BQ7Z3V4 1068 aa12.39□□□□□ -0.43
CIT-204ENST00000469414 DNAJC5GQ8N7S2 189 aa12.39□□□□□ -0.43
CIT-204ENST00000469414 EYA3Q99504 573 aa12.39□□□□□ -0.43
CIT-204ENST00000469414 BCL2L13Q9BXK5 485 aa12.39□□□□□ -0.43
CIT-204ENST00000469414 CDHR2Q9BYE9 1310 aa12.38□□□□□ -0.43
CIT-204ENST00000469414 CCDC88AQ3V6T2 1871 aa12.38□□□□□ -0.43
CIT-204ENST00000469414 WDR90Q96KV7 1748 aa12.38□□□□□ -0.43
CIT-204ENST00000469414 F6X3S4 739 aa12.38□□□□□ -0.43
CIT-204ENST00000469414 EPS15P42566 896 aa12.38□□□□□ -0.43
CIT-204ENST00000469414 GCKRQ14397 625 aa12.38□□□□□ -0.43
CIT-204ENST00000469414 LINS1Q8NG48 757 aa12.38□□□□□ -0.43
CIT-204ENST00000469414 CDC5LQ99459 802 aaKnown RBP12.38□□□□□ -0.43
CIT-204ENST00000469414 ZC3H12CQ9C0D7 883 aaKnown RBP12.38□□□□□ -0.43
CIT-204ENST00000469414 POLLQ9UGP5 575 aa12.38□□□□□ -0.43
CIT-204ENST00000469414 ANKRD36CQ5JPF3 1778 aa12.38□□□□□ -0.43
CIT-204ENST00000469414 H7C1W4 665 aa12.37□□□□□ -0.43
CIT-204ENST00000469414 UFL1O94874 794 aa12.37□□□□□ -0.43
CIT-204ENST00000469414 SCNN1DP51172 638 aa12.37□□□□□ -0.43
CIT-204ENST00000469414 DOK7Q18PE1 504 aa12.37□□□□□ -0.43
CIT-204ENST00000469414 MAP1SQ66K74 1059 aaPredicted RBP12.37□□□□□ -0.43
CIT-204ENST00000469414 TTLL11Q8NHH1 800 aa12.37□□□□□ -0.43
CIT-204ENST00000469414 TBC1D16Q8TBP0 767 aa12.37□□□□□ -0.43
CIT-204ENST00000469414 KLRG1Q96E93 195 aa12.37□□□□□ -0.43
CIT-204ENST00000469414 GPR101Q96P66 508 aaPredicted RBP12.37□□□□□ -0.43
CIT-204ENST00000469414 DBNDD1Q9H9R9 158 aa12.37□□□□□ -0.43
CIT-204ENST00000469414 GGA1Q9UJY5 639 aa12.37□□□□□ -0.43
CIT-204ENST00000469414 E9PSI1 815 aa12.36□□□□□ -0.43
CIT-204ENST00000469414 GMPSP49915 693 aaPredicted RBP12.36□□□□□ -0.43
CIT-204ENST00000469414 SLC4A10Q6U841 1118 aa12.36□□□□□ -0.43
CIT-204ENST00000469414 CNTROBQ8N137 903 aa12.36□□□□□ -0.43
CIT-204ENST00000469414 GREM2Q9H772 168 aa12.36□□□□□ -0.43
CIT-204ENST00000469414 COL4A5P29400 1685 aa12.35□□□□□ -0.43
CIT-204ENST00000469414 DICER1Q9UPY3 1922 aaKnown RBP12.35□□□□□ -0.43
CIT-204ENST00000469414 CEP350Q5VT06 3117 aa12.35□□□□□ -0.43
CIT-204ENST00000469414 CCER2I3L3R5 266 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms