RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 IL27Q8NEV9 243 aa11.37□□□□□ -0.59
SMC1A-205ENST00000469129 RUFY2Q8WXA3 655 aa11.37□□□□□ -0.59
SMC1A-205ENST00000469129 JARID2Q92833 1246 aaPredicted RBP11.37□□□□□ -0.59
SMC1A-205ENST00000469129 EVI5LQ96CN4 794 aa11.37□□□□□ -0.59
SMC1A-205ENST00000469129 ANP32EQ9BTT0 268 aa11.37□□□□□ -0.59
SMC1A-205ENST00000469129 FPGT-TNNI3KV9GXZ4 949 aa11.37□□□□□ -0.59
SMC1A-205ENST00000469129 RAD50Q92878 1312 aa11.36□□□□□ -0.59
SMC1A-205ENST00000469129 EYA2O00167 538 aa11.36□□□□□ -0.59
SMC1A-205ENST00000469129 GPTP24298 496 aa11.36□□□□□ -0.59
SMC1A-205ENST00000469129 RABEP1Q15276 862 aa11.36□□□□□ -0.59
SMC1A-205ENST00000469129 HLFQ16534 295 aa11.36□□□□□ -0.59
SMC1A-205ENST00000469129 TAF7LQ5H9L4 462 aa11.36□□□□□ -0.59
SMC1A-205ENST00000469129 FAM196AQ6ZSG2 479 aa11.36□□□□□ -0.59
SMC1A-205ENST00000469129 ZNF34Q8IZ26 560 aa11.36□□□□□ -0.59
SMC1A-205ENST00000469129 KLHDC4Q8TBB5 520 aa11.36□□□□□ -0.59
SMC1A-205ENST00000469129 SNX21Q969T3 373 aa11.36□□□□□ -0.59
SMC1A-205ENST00000469129 EAF2Q96CJ1 260 aaPredicted RBP11.36□□□□□ -0.59
SMC1A-205ENST00000469129 USP26Q9BXU7 913 aa11.36□□□□□ -0.59
SMC1A-205ENST00000469129 DIAPH3Q9NSV4 1193 aa11.36□□□□□ -0.59
SMC1A-205ENST00000469129 MYH13Q9UKX3 1938 aa11.36□□□□□ -0.59
SMC1A-205ENST00000469129 TNS1Q9HBL0 1735 aaKnown RBP11.35□□□□□ -0.59
SMC1A-205ENST00000469129 KCNQ2O43526 872 aa11.35□□□□□ -0.59
SMC1A-205ENST00000469129 PDE8AO60658 829 aa11.35□□□□□ -0.59
SMC1A-205ENST00000469129 HMGB2P26583 209 aaKnown RBP11.35□□□□□ -0.59
SMC1A-205ENST00000469129 CTSWP56202 376 aa11.35□□□□□ -0.59
SMC1A-205ENST00000469129 TFCP2Q12800 502 aa11.35□□□□□ -0.59
SMC1A-205ENST00000469129 IFIT5Q13325 482 aaKnown RBP11.35□□□□□ -0.59
SMC1A-205ENST00000469129 RTL5Q5HYW3 569 aaPredicted RBP11.35□□□□□ -0.59
SMC1A-205ENST00000469129 RC3H1Q5TC82 1133 aaKnown RBP11.35□□□□□ -0.59
SMC1A-205ENST00000469129 TRMT112Q9UI30 125 aaKnown RBP11.35□□□□□ -0.59
SMC1A-205ENST00000469129 TBC1D2BQ9UPU7 963 aa11.35□□□□□ -0.59
SMC1A-205ENST00000469129 ABCC12Q96J65 1359 aa11.35□□□□□ -0.59
SMC1A-205ENST00000469129 DOCK2Q92608 1830 aa11.35□□□□□ -0.59
SMC1A-205ENST00000469129 SH3TC1Q8TE82 1336 aa11.35□□□□□ -0.59
SMC1A-205ENST00000469129 RTL9Q8NET4 1388 aa11.34□□□□□ -0.59
SMC1A-205ENST00000469129 CAMTA2O94983 1202 aa11.34□□□□□ -0.59
SMC1A-205ENST00000469129 CSF1RP07333 972 aa11.34□□□□□ -0.59
SMC1A-205ENST00000469129 ATP5JP18859 108 aa11.34□□□□□ -0.59
SMC1A-205ENST00000469129 ANAPC15P60006 121 aa11.34□□□□□ -0.59
SMC1A-205ENST00000469129 CLEC4GQ6UXB4 293 aa11.34□□□□□ -0.59
SMC1A-205ENST00000469129 DEFB132Q7Z7B7 95 aa11.34□□□□□ -0.59
SMC1A-205ENST00000469129 TICAM2Q86XR7 235 aa11.34□□□□□ -0.59
SMC1A-205ENST00000469129 FAM89AQ96GI7 184 aa11.34□□□□□ -0.59
SMC1A-205ENST00000469129 TBC1D2Q9BYX2 928 aa11.34□□□□□ -0.59
SMC1A-205ENST00000469129 AKAP2Q9Y2D5 859 aa11.34□□□□□ -0.59
SMC1A-205ENST00000469129 RIC1Q4ADV7 1423 aa11.34□□□□□ -0.59
SMC1A-205ENST00000469129 UBN2Q6ZU65 1347 aa11.34□□□□□ -0.59
SMC1A-205ENST00000469129 ANKRD18BA2A2Z9 1011 aa11.33□□□□□ -0.6
SMC1A-205ENST00000469129 IRS4O14654 1257 aaPredicted RBP11.33□□□□□ -0.6
SMC1A-205ENST00000469129 BAG6P46379 1132 aa11.33□□□□□ -0.6
SMC1A-205ENST00000469129 ATG9AQ7Z3C6 839 aa11.33□□□□□ -0.6
SMC1A-205ENST00000469129 LINC00116Q8NCU8 138 aa11.33□□□□□ -0.6
SMC1A-205ENST00000469129 UTP14AQ9BVJ6 771 aaKnown RBP11.33□□□□□ -0.6
SMC1A-205ENST00000469129 CCDC8Q9H0W5 538 aaPredicted RBP11.33□□□□□ -0.6
SMC1A-205ENST00000469129 ANO2Q9NQ90 1003 aa11.33□□□□□ -0.6
SMC1A-205ENST00000469129 AKAP11Q9UKA4 1901 aa11.33□□□□□ -0.6
SMC1A-205ENST00000469129 SGSM2O43147 1006 aa11.32□□□□□ -0.6
SMC1A-205ENST00000469129 ST18O60284 1047 aa11.32□□□□□ -0.6
SMC1A-205ENST00000469129 TRIM37O94972 964 aa11.32□□□□□ -0.6
SMC1A-205ENST00000469129 KIAA1211Q6ZU35 1233 aa11.32□□□□□ -0.6
SMC1A-205ENST00000469129 FSD1Q9BTV5 496 aa11.32□□□□□ -0.6
SMC1A-205ENST00000469129 TLR7Q9NYK1 1049 aaKnown RBP11.32□□□□□ -0.6
SMC1A-205ENST00000469129 CEP126Q9P2H0 1117 aa11.32□□□□□ -0.6
SMC1A-205ENST00000469129 DBNLQ9UJU6 430 aaKnown RBP11.32□□□□□ -0.6
SMC1A-205ENST00000469129 CCNL1Q9UK58 526 aaPredicted RBP11.32□□□□□ -0.6
SMC1A-205ENST00000469129 MAP4K4O95819 1239 aaPredicted RBP11.31□□□□□ -0.6
SMC1A-205ENST00000469129 SLC4A3P48751 1232 aa11.31□□□□□ -0.6
SMC1A-205ENST00000469129 TTLL11Q8NHH1 800 aa11.31□□□□□ -0.6
SMC1A-205ENST00000469129 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.31□□□□□ -0.6
SMC1A-205ENST00000469129 KIF2CQ99661 725 aa11.31□□□□□ -0.6
SMC1A-205ENST00000469129 NIP7Q9Y221 180 aaKnown RBP eCLIP11.31□□□□□ -0.6
SMC1A-205ENST00000469129 K7ELQ4 463 aaPredicted RBP11.3□□□□□ -0.6
SMC1A-205ENST00000469129 RPS6KA4O75676 772 aa11.3□□□□□ -0.6
SMC1A-205ENST00000469129 NTSR2O95665 410 aa11.3□□□□□ -0.6
SMC1A-205ENST00000469129 ITGA6P23229 1130 aa11.3□□□□□ -0.6
SMC1A-205ENST00000469129 LRRFIP1Q32MZ4 808 aaKnown RBP11.3□□□□□ -0.6
SMC1A-205ENST00000469129 CCDC152Q4G0S7 254 aa11.3□□□□□ -0.6
SMC1A-205ENST00000469129 IL17RAQ96F46 866 aa11.3□□□□□ -0.6
SMC1A-205ENST00000469129 DBNDD2Q9BQY9 259 aa11.3□□□□□ -0.6
SMC1A-205ENST00000469129 BCL11BQ9C0K0 894 aaPredicted RBP11.3□□□□□ -0.6
SMC1A-205ENST00000469129 A0A1B0GUL7 405 aa11.29□□□□□ -0.6
SMC1A-205ENST00000469129 EN1Q05925 392 aaPredicted RBP11.29□□□□□ -0.6
SMC1A-205ENST00000469129 LRRC24Q50LG9 513 aa11.29□□□□□ -0.6
SMC1A-205ENST00000469129 ZNF594Q96JF6 807 aaPredicted RBP11.29□□□□□ -0.6
SMC1A-205ENST00000469129 NEUROD6Q96NK8 337 aa11.29□□□□□ -0.6
SMC1A-205ENST00000469129 HAUS7Q99871 368 aa11.29□□□□□ -0.6
SMC1A-205ENST00000469129 NYXQ9GZU5 481 aa11.29□□□□□ -0.6
SMC1A-205ENST00000469129 BOLA2Q9H3K6 86 aa11.29□□□□□ -0.6
SMC1A-205ENST00000469129 GREM2Q9H772 168 aa11.29□□□□□ -0.6
SMC1A-205ENST00000469129 CNNM1Q9NRU3 951 aa11.29□□□□□ -0.6
SMC1A-205ENST00000469129 NARFQ9UHQ1 456 aa11.29□□□□□ -0.6
SMC1A-205ENST00000469129 RTCBQ9Y3I0 505 aaKnown RBP11.29□□□□□ -0.6
SMC1A-205ENST00000469129 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.29□□□□□ -0.6
SMC1A-205ENST00000469129 LAMA4Q16363 1823 aa11.29□□□□□ -0.6
SMC1A-205ENST00000469129 MROH5Q6ZUA9 1318 aa11.29□□□□□ -0.6
SMC1A-205ENST00000469129 MED23Q9ULK4 1368 aa11.28□□□□□ -0.6
SMC1A-205ENST00000469129 TNRC6CQ9HCJ0 1690 aaKnown RBP11.28□□□□□ -0.6
SMC1A-205ENST00000469129 GNPATO15228 680 aa11.28□□□□□ -0.6
SMC1A-205ENST00000469129 ZPR1O75312 459 aa11.28□□□□□ -0.6
SMC1A-205ENST00000469129 APBA3O96018 575 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms