RNA–Protein interactions for RNA: ENST00000468836.1

CLRN1-204, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-204ENST00000468836 DNAAF4Q8WXU2 420 aa16.57■□□□□ 0.24
CLRN1-204ENST00000468836 FER1L6Q2WGJ9 1857 aa16.56■□□□□ 0.24
CLRN1-204ENST00000468836 CWF19L2Q2TBE0 894 aaKnown RBP16.56■□□□□ 0.24
CLRN1-204ENST00000468836 SP8Q8IXZ3 490 aa16.56■□□□□ 0.24
CLRN1-204ENST00000468836 MPNDQ8N594 471 aa16.56■□□□□ 0.24
CLRN1-204ENST00000468836 PPIP5K2O43314 1243 aa16.55■□□□□ 0.24
CLRN1-204ENST00000468836 EIF6P56537 245 aaKnown RBP16.55■□□□□ 0.24
CLRN1-204ENST00000468836 NIM1KQ8IY84 436 aa16.55■□□□□ 0.24
CLRN1-204ENST00000468836 JARID2Q92833 1246 aaPredicted RBP16.55■□□□□ 0.24
CLRN1-204ENST00000468836 SBF1O95248 1867 aa16.54■□□□□ 0.24
CLRN1-204ENST00000468836 CDHR2Q9BYE9 1310 aa16.54■□□□□ 0.24
CLRN1-204ENST00000468836 IQCA1LA6NCM1 817 aa16.54■□□□□ 0.24
CLRN1-204ENST00000468836 NEURL1BA8MQ27 555 aa16.54■□□□□ 0.24
CLRN1-204ENST00000468836 DDNO94850 711 aaPredicted RBP16.54■□□□□ 0.24
CLRN1-204ENST00000468836 IGKV5-2P06315 115 aa16.54■□□□□ 0.24
CLRN1-204ENST00000468836 RBM46Q8TBY0 533 aaKnown RBP16.54■□□□□ 0.24
CLRN1-204ENST00000468836 CCDC85AQ96PX6 553 aaPredicted RBP16.54■□□□□ 0.24
CLRN1-204ENST00000468836 LINS1Q8NG48 757 aa16.53■□□□□ 0.24
CLRN1-204ENST00000468836 CELF1Q92879 486 aaKnown RBP16.53■□□□□ 0.24
CLRN1-204ENST00000468836 CTSWP56202 376 aa16.52■□□□□ 0.24
CLRN1-204ENST00000468836 SLFN5Q08AF3 891 aa16.52■□□□□ 0.24
CLRN1-204ENST00000468836 AOC3Q16853 763 aa16.52■□□□□ 0.24
CLRN1-204ENST00000468836 UBE3BQ7Z3V4 1068 aa16.52■□□□□ 0.24
CLRN1-204ENST00000468836 VPS33BQ9H267 617 aa16.52■□□□□ 0.24
CLRN1-204ENST00000468836 ZNF541Q9H0D2 1346 aa16.51■□□□□ 0.23
CLRN1-204ENST00000468836 HSPA6P17066 643 aa16.51■□□□□ 0.23
CLRN1-204ENST00000468836 RPS8P62241 208 aaKnown RBP16.51■□□□□ 0.23
CLRN1-204ENST00000468836 GCKRQ14397 625 aa16.51■□□□□ 0.23
CLRN1-204ENST00000468836 SLC4A10Q6U841 1118 aa16.51■□□□□ 0.23
CLRN1-204ENST00000468836 SLC51AQ86UW1 340 aa16.51■□□□□ 0.23
CLRN1-204ENST00000468836 ANKRD18AQ8IVF6 992 aa16.51■□□□□ 0.23
CLRN1-204ENST00000468836 MIER1Q8N108 512 aa16.51■□□□□ 0.23
CLRN1-204ENST00000468836 SMC1BQ8NDV3 1235 aa16.51■□□□□ 0.23
CLRN1-204ENST00000468836 CDC5LQ99459 802 aaKnown RBP16.51■□□□□ 0.23
CLRN1-204ENST00000468836 NSFL1CQ9UNZ2 370 aaKnown RBP16.51■□□□□ 0.23
CLRN1-204ENST00000468836 GJA3Q9Y6H8 435 aa16.51■□□□□ 0.23
CLRN1-204ENST00000468836 SNED1Q8TER0 1413 aa16.51■□□□□ 0.23
CLRN1-204ENST00000468836 DDX60Q8IY21 1712 aaKnown RBP16.5■□□□□ 0.23
CLRN1-204ENST00000468836 F6X3S4 739 aa16.5■□□□□ 0.23
CLRN1-204ENST00000468836 FZD9O00144 591 aa16.5■□□□□ 0.23
CLRN1-204ENST00000468836 FSTL1Q12841 308 aa16.5■□□□□ 0.23
CLRN1-204ENST00000468836 SEC31BQ9NQW1 1179 aa16.5■□□□□ 0.23
CLRN1-204ENST00000468836 LAMB2P55268 1798 aa16.49■□□□□ 0.23
CLRN1-204ENST00000468836 C6orf229H3BNL8 230 aa16.49■□□□□ 0.23
CLRN1-204ENST00000468836 LMOD1P29536 600 aaPredicted RBP16.49■□□□□ 0.23
CLRN1-204ENST00000468836 GPC2Q8N158 579 aa16.49■□□□□ 0.23
CLRN1-204ENST00000468836 EYA3Q99504 573 aa16.49■□□□□ 0.23
CLRN1-204ENST00000468836 RTFDC1Q9BY42 306 aaPredicted RBP16.49■□□□□ 0.23
CLRN1-204ENST00000468836 ANKIB1Q9P2G1 1089 aa16.49■□□□□ 0.23
CLRN1-204ENST00000468836 G3V3G9 751 aa16.48■□□□□ 0.23
CLRN1-204ENST00000468836 H7C1W4 665 aa16.48■□□□□ 0.23
CLRN1-204ENST00000468836 DCAF8Q5TAQ9 597 aa16.48■□□□□ 0.23
CLRN1-204ENST00000468836 CDCA7LQ96GN5 454 aa16.48■□□□□ 0.23
CLRN1-204ENST00000468836 HACL1Q9UJ83 578 aa16.48■□□□□ 0.23
CLRN1-204ENST00000468836 IGHMBP2P38935 993 aaKnown RBP16.47■□□□□ 0.23
CLRN1-204ENST00000468836 GPSM2P81274 684 aa16.47■□□□□ 0.23
CLRN1-204ENST00000468836 KIAA2012Q0VF49 1180 aa16.47■□□□□ 0.23
CLRN1-204ENST00000468836 WASHC4Q2M389 1173 aa16.47■□□□□ 0.23
CLRN1-204ENST00000468836 EAPPQ56P03 285 aaPredicted RBP16.47■□□□□ 0.23
CLRN1-204ENST00000468836 L3MBTL3Q96JM7 780 aaPredicted RBP16.47■□□□□ 0.23
CLRN1-204ENST00000468836 SRCIN1Q9C0H9 1055 aa16.47■□□□□ 0.23
CLRN1-204ENST00000468836 SMC4Q9NTJ3 1288 aa16.47■□□□□ 0.23
CLRN1-204ENST00000468836 C9orf78Q9NZ63 289 aaPredicted RBP16.47■□□□□ 0.23
CLRN1-204ENST00000468836 ZNRF3Q9ULT6 936 aa16.47■□□□□ 0.23
CLRN1-204ENST00000468836 CCDC88AQ3V6T2 1871 aa16.47■□□□□ 0.23
CLRN1-204ENST00000468836 WDR90Q96KV7 1748 aa16.47■□□□□ 0.23
CLRN1-204ENST00000468836 APLP1P51693 650 aa16.46■□□□□ 0.23
CLRN1-204ENST00000468836 BEND3Q5T5X7 828 aa16.46■□□□□ 0.23
CLRN1-204ENST00000468836 TTLL11Q8NHH1 800 aa16.46■□□□□ 0.23
CLRN1-204ENST00000468836 BCL2L13Q9BXK5 485 aa16.46■□□□□ 0.23
CLRN1-204ENST00000468836 GREM2Q9H772 168 aa16.46■□□□□ 0.23
CLRN1-204ENST00000468836 CHMP3Q9Y3E7 222 aa16.46■□□□□ 0.23
CLRN1-204ENST00000468836 DICER1Q9UPY3 1922 aaKnown RBP16.46■□□□□ 0.23
CLRN1-204ENST00000468836 PTPRCP08575 1304 aa16.45■□□□□ 0.22
CLRN1-204ENST00000468836 POTECB2RU33 542 aa16.45■□□□□ 0.22
CLRN1-204ENST00000468836 RIMBP2O15034 1052 aa16.45■□□□□ 0.22
CLRN1-204ENST00000468836 ALDH1L1O75891 902 aa16.45■□□□□ 0.22
CLRN1-204ENST00000468836 UFL1O94874 794 aa16.45■□□□□ 0.22
CLRN1-204ENST00000468836 CT47B1P0C2W7 299 aaPredicted RBP16.45■□□□□ 0.22
CLRN1-204ENST00000468836 HNRNPUQ00839 825 aaKnown RBP eCLIP16.45■□□□□ 0.22
CLRN1-204ENST00000468836 ALDH1L2Q3SY69 923 aa16.45■□□□□ 0.22
CLRN1-204ENST00000468836 MRPL50Q8N5N7 158 aaKnown RBP16.45■□□□□ 0.22
CLRN1-204ENST00000468836 GGA1Q9UJY5 639 aa16.45■□□□□ 0.22
CLRN1-204ENST00000468836 CLEC11AQ9Y240 323 aa16.45■□□□□ 0.22
CLRN1-204ENST00000468836 GRM8O00222 908 aa16.44■□□□□ 0.22
CLRN1-204ENST00000468836 EPHX2P34913 555 aa16.44■□□□□ 0.22
CLRN1-204ENST00000468836 TNIP1Q15025 636 aa16.44■□□□□ 0.22
CLRN1-204ENST00000468836 CIAPIN1Q6FI81 312 aa16.44■□□□□ 0.22
CLRN1-204ENST00000468836 PNMA8AQ86V59 439 aaPredicted RBP16.44■□□□□ 0.22
CLRN1-204ENST00000468836 SSH1Q8WYL5 1049 aa16.44■□□□□ 0.22
CLRN1-204ENST00000468836 MPHOSPH8Q99549 860 aa16.44■□□□□ 0.22
CLRN1-204ENST00000468836 PLA2G12BQ9BX93 195 aa16.44■□□□□ 0.22
CLRN1-204ENST00000468836 ZC3H12CQ9C0D7 883 aaKnown RBP16.44■□□□□ 0.22
CLRN1-204ENST00000468836 TAF1DQ9H5J8 278 aaPredicted RBP16.44■□□□□ 0.22
CLRN1-204ENST00000468836 XDHP47989 1333 aa16.44■□□□□ 0.22
CLRN1-204ENST00000468836 RTL9Q8NET4 1388 aa16.43■□□□□ 0.22
CLRN1-204ENST00000468836 ITGA6P23229 1130 aa16.43■□□□□ 0.22
CLRN1-204ENST00000468836 FAM161AQ3B820 660 aa16.43■□□□□ 0.22
CLRN1-204ENST00000468836 TAF7LQ5H9L4 462 aa16.43■□□□□ 0.22
CLRN1-204ENST00000468836 CHADLQ6NUI6 762 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms