RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 MYH16Q9H6N6 1097 aa21.94■■□□□ 1.1
SSBP1-207ENST00000468267 CWC25Q9NXE8 425 aaPredicted RBP21.94■■□□□ 1.1
SSBP1-207ENST00000468267 PCCAP05165 728 aaPredicted RBP21.93■■□□□ 1.1
SSBP1-207ENST00000468267 FSTL1Q12841 308 aa21.93■■□□□ 1.1
SSBP1-207ENST00000468267 ZNF521Q96K83 1311 aa21.92■■□□□ 1.1
SSBP1-207ENST00000468267 FZD9O00144 591 aa21.92■■□□□ 1.1
SSBP1-207ENST00000468267 HSP90B1P14625 803 aaKnown RBP21.92■■□□□ 1.1
SSBP1-207ENST00000468267 TMC4Q7Z404 712 aa21.92■■□□□ 1.1
SSBP1-207ENST00000468267 JDP2Q8WYK2 163 aa21.92■■□□□ 1.1
SSBP1-207ENST00000468267 ZNF541Q9H0D2 1346 aa21.91■■□□□ 1.1
SSBP1-207ENST00000468267 IGKV5-2P06315 115 aa21.91■■□□□ 1.1
SSBP1-207ENST00000468267 NEXNQ0ZGT2 675 aa21.9■■□□□ 1.1
SSBP1-207ENST00000468267 FLIIQ13045 1269 aa21.9■■□□□ 1.1
SSBP1-207ENST00000468267 SMC1BQ8NDV3 1235 aa21.9■■□□□ 1.1
SSBP1-207ENST00000468267 L3MBTL3Q96JM7 780 aaPredicted RBP21.9■■□□□ 1.1
SSBP1-207ENST00000468267 RTFDC1Q9BY42 306 aaPredicted RBP21.9■■□□□ 1.1
SSBP1-207ENST00000468267 VPS33BQ9H267 617 aa21.9■■□□□ 1.1
SSBP1-207ENST00000468267 COL4A5P29400 1685 aa21.9■■□□□ 1.1
SSBP1-207ENST00000468267 LARGE2Q8N3Y3 721 aa21.89■■□□□ 1.09
SSBP1-207ENST00000468267 MPNDQ8N594 471 aa21.89■■□□□ 1.09
SSBP1-207ENST00000468267 JARID2Q92833 1246 aaPredicted RBP21.89■■□□□ 1.09
SSBP1-207ENST00000468267 SCN4AP35499 1836 aa21.89■■□□□ 1.09
SSBP1-207ENST00000468267 CCER2I3L3R5 266 aa21.88■■□□□ 1.09
SSBP1-207ENST00000468267 APLP1P51693 650 aa21.88■■□□□ 1.09
SSBP1-207ENST00000468267 DPP8Q6V1X1 898 aaPredicted RBP21.88■■□□□ 1.09
SSBP1-207ENST00000468267 SUPT20HQ8NEM7 779 aa21.88■■□□□ 1.09
SSBP1-207ENST00000468267 CELF1Q92879 486 aaKnown RBP21.88■■□□□ 1.09
SSBP1-207ENST00000468267 LRRC37AA6NMS7 1700 aa21.87■■□□□ 1.09
SSBP1-207ENST00000468267 NEURL1BA8MQ27 555 aa21.87■■□□□ 1.09
SSBP1-207ENST00000468267 PDE8AO60658 829 aa21.87■■□□□ 1.09
SSBP1-207ENST00000468267 FKBP5Q13451 457 aaPredicted RBP21.87■■□□□ 1.09
SSBP1-207ENST00000468267 CDHR2Q9BYE9 1310 aa21.86■■□□□ 1.09
SSBP1-207ENST00000468267 IQCA1LA6NCM1 817 aa21.86■■□□□ 1.09
SSBP1-207ENST00000468267 PPIP5K2O43314 1243 aa21.86■■□□□ 1.09
SSBP1-207ENST00000468267 EIF6P56537 245 aaKnown RBP21.86■■□□□ 1.09
SSBP1-207ENST00000468267 RPS8P62241 208 aaKnown RBP21.86■■□□□ 1.09
SSBP1-207ENST00000468267 AOC3Q16853 763 aa21.86■■□□□ 1.09
SSBP1-207ENST00000468267 CWF19L2Q2TBE0 894 aaKnown RBP21.86■■□□□ 1.09
SSBP1-207ENST00000468267 GPC2Q8N158 579 aa21.86■■□□□ 1.09
SSBP1-207ENST00000468267 COL4A1P02462 1669 aa21.85■■□□□ 1.09
SSBP1-207ENST00000468267 CCDC152Q4G0S7 254 aa21.85■■□□□ 1.09
SSBP1-207ENST00000468267 DNAAF4Q8WXU2 420 aa21.85■■□□□ 1.09
SSBP1-207ENST00000468267 MYH3P11055 1940 aa21.84■■□□□ 1.09
SSBP1-207ENST00000468267 NIM1KQ8IY84 436 aa21.84■■□□□ 1.09
SSBP1-207ENST00000468267 TAF1DQ9H5J8 278 aaPredicted RBP21.84■■□□□ 1.09
SSBP1-207ENST00000468267 SEC31BQ9NQW1 1179 aa21.84■■□□□ 1.09
SSBP1-207ENST00000468267 H7C1W4 665 aa21.83■■□□□ 1.09
SSBP1-207ENST00000468267 KIAA2012Q0VF49 1180 aa21.83■■□□□ 1.09
SSBP1-207ENST00000468267 GCKRQ14397 625 aa21.82■■□□□ 1.08
SSBP1-207ENST00000468267 HACL1Q9UJ83 578 aa21.82■■□□□ 1.08
SSBP1-207ENST00000468267 GJA3Q9Y6H8 435 aa21.82■■□□□ 1.08
SSBP1-207ENST00000468267 E9PSI1 815 aa21.81■■□□□ 1.08
SSBP1-207ENST00000468267 CTSWP56202 376 aa21.81■■□□□ 1.08
SSBP1-207ENST00000468267 LINS1Q8NG48 757 aa21.81■■□□□ 1.08
SSBP1-207ENST00000468267 ZNRF3Q9ULT6 936 aa21.81■■□□□ 1.08
SSBP1-207ENST00000468267 NSFL1CQ9UNZ2 370 aaKnown RBP21.81■■□□□ 1.08
SSBP1-207ENST00000468267 DUOX1Q9NRD9 1551 aa21.81■■□□□ 1.08
SSBP1-207ENST00000468267 POTEIP0CG38 1075 aa21.8■■□□□ 1.08
SSBP1-207ENST00000468267 POTEJP0CG39 1038 aa21.8■■□□□ 1.08
SSBP1-207ENST00000468267 GPSM2P81274 684 aa21.8■■□□□ 1.08
SSBP1-207ENST00000468267 CHADLQ6NUI6 762 aa21.8■■□□□ 1.08
SSBP1-207ENST00000468267 UBE3BQ7Z3V4 1068 aa21.8■■□□□ 1.08
SSBP1-207ENST00000468267 TTLL11Q8NHH1 800 aa21.8■■□□□ 1.08
SSBP1-207ENST00000468267 CCDC85AQ96PX6 553 aaPredicted RBP21.8■■□□□ 1.08
SSBP1-207ENST00000468267 POLLQ9UGP5 575 aa21.79■■□□□ 1.08
SSBP1-207ENST00000468267 LTBP1Q14766 1721 aa21.78■■□□□ 1.08
SSBP1-207ENST00000468267 F6X3S4 739 aa21.78■■□□□ 1.08
SSBP1-207ENST00000468267 EPHX2P34913 555 aa21.78■■□□□ 1.08
SSBP1-207ENST00000468267 CASP7P55210 303 aa21.78■■□□□ 1.08
SSBP1-207ENST00000468267 CXCL9Q07325 125 aa21.78■■□□□ 1.08
SSBP1-207ENST00000468267 SLFN5Q08AF3 891 aa21.78■■□□□ 1.08
SSBP1-207ENST00000468267 LDHDQ86WU2 507 aa21.78■■□□□ 1.08
SSBP1-207ENST00000468267 DNAJC5GQ8N7S2 189 aa21.78■■□□□ 1.08
SSBP1-207ENST00000468267 C6orf229H3BNL8 230 aa21.77■■□□□ 1.08
SSBP1-207ENST00000468267 WASHC4Q2M389 1173 aa21.77■■□□□ 1.08
SSBP1-207ENST00000468267 ANKRD18AQ8IVF6 992 aa21.77■■□□□ 1.08
SSBP1-207ENST00000468267 PLA2G12BQ9BX93 195 aa21.77■■□□□ 1.08
SSBP1-207ENST00000468267 PODXL2Q9NZ53 605 aa21.77■■□□□ 1.08
SSBP1-207ENST00000468267 PCNTO95613 3336 aa21.77■■□□□ 1.08
SSBP1-207ENST00000468267 RTL9Q8NET4 1388 aa21.76■■□□□ 1.07
SSBP1-207ENST00000468267 SCNN1DP51172 638 aa21.76■■□□□ 1.07
SSBP1-207ENST00000468267 EAPPQ56P03 285 aaPredicted RBP21.76■■□□□ 1.07
SSBP1-207ENST00000468267 BEND3Q5T5X7 828 aa21.76■■□□□ 1.07
SSBP1-207ENST00000468267 PNMA8AQ86V59 439 aaPredicted RBP21.76■■□□□ 1.07
SSBP1-207ENST00000468267 TBC1D16Q8TBP0 767 aa21.76■■□□□ 1.07
SSBP1-207ENST00000468267 CDC5LQ99459 802 aaKnown RBP21.76■■□□□ 1.07
SSBP1-207ENST00000468267 GREM2Q9H772 168 aa21.76■■□□□ 1.07
SSBP1-207ENST00000468267 LMOD1P29536 600 aaPredicted RBP21.75■■□□□ 1.07
SSBP1-207ENST00000468267 HTRA3P83110 453 aa21.75■■□□□ 1.07
SSBP1-207ENST00000468267 YDJCA8MPS7 323 aa21.74■■□□□ 1.07
SSBP1-207ENST00000468267 RIMBP2O15034 1052 aa21.74■■□□□ 1.07
SSBP1-207ENST00000468267 EPS15P42566 896 aa21.74■■□□□ 1.07
SSBP1-207ENST00000468267 CIAPIN1Q6FI81 312 aa21.74■■□□□ 1.07
SSBP1-207ENST00000468267 CDCA7LQ96GN5 454 aa21.74■■□□□ 1.07
SSBP1-207ENST00000468267 EYA3Q99504 573 aa21.74■■□□□ 1.07
SSBP1-207ENST00000468267 ANKIB1Q9P2G1 1089 aa21.74■■□□□ 1.07
SSBP1-207ENST00000468267 ADAMTSL1Q8N6G6 1762 aa21.74■■□□□ 1.07
SSBP1-207ENST00000468267 CSF1RP07333 972 aa21.73■■□□□ 1.07
SSBP1-207ENST00000468267 TNIP1Q15025 636 aa21.73■■□□□ 1.07
SSBP1-207ENST00000468267 TRMT2AQ8IZ69 625 aaKnown RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms