RNA–Protein interactions for RNA: ENST00000468166.5

SND1-206, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-206ENST00000468166 AMIGO3Q86WK7 504 aa9.82□□□□□ -0.84
SND1-206ENST00000468166 CLASRPQ8N2M8 674 aaKnown RBP9.82□□□□□ -0.84
SND1-206ENST00000468166 ARHGEF1Q92888 912 aaKnown RBP9.82□□□□□ -0.84
SND1-206ENST00000468166 SRP68Q9UHB9 627 aaKnown RBP9.82□□□□□ -0.84
SND1-206ENST00000468166 RBM19Q9Y4C8 960 aaKnown RBP9.82□□□□□ -0.84
SND1-206ENST00000468166 AOX1Q06278 1338 aa9.82□□□□□ -0.84
SND1-206ENST00000468166 SALL3Q9BXA9 1300 aa9.82□□□□□ -0.84
SND1-206ENST00000468166 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.81□□□□□ -0.84
SND1-206ENST00000468166 CSF1RP07333 972 aa9.81□□□□□ -0.84
SND1-206ENST00000468166 SSFA2P28290 1259 aa9.81□□□□□ -0.84
SND1-206ENST00000468166 IFIT5Q13325 482 aaKnown RBP9.81□□□□□ -0.84
SND1-206ENST00000468166 TAF7LQ5H9L4 462 aa9.81□□□□□ -0.84
SND1-206ENST00000468166 TBC1D9BQ66K14 1250 aa9.81□□□□□ -0.84
SND1-206ENST00000468166 NUTM1Q86Y26 1132 aa9.81□□□□□ -0.84
SND1-206ENST00000468166 SYNE4Q8N205 404 aa9.81□□□□□ -0.84
SND1-206ENST00000468166 CCDC85AQ96PX6 553 aaPredicted RBP9.81□□□□□ -0.84
SND1-206ENST00000468166 OSBPL3Q9H4L5 887 aa9.81□□□□□ -0.84
SND1-206ENST00000468166 BCL2L12Q9HB09 334 aa9.81□□□□□ -0.84
SND1-206ENST00000468166 CIAO1O76071 339 aa9.8□□□□□ -0.84
SND1-206ENST00000468166 SASH1O94885 1247 aa9.8□□□□□ -0.84
SND1-206ENST00000468166 IFIT2P09913 472 aaKnown RBP9.8□□□□□ -0.84
SND1-206ENST00000468166 GSPT1P15170 499 aaKnown RBP9.8□□□□□ -0.84
SND1-206ENST00000468166 BICDL1Q6ZP65 573 aa9.8□□□□□ -0.84
SND1-206ENST00000468166 AACSQ86V21 672 aa9.8□□□□□ -0.84
SND1-206ENST00000468166 PROM2Q8N271 834 aa9.8□□□□□ -0.84
SND1-206ENST00000468166 TTLL11Q8NHH1 800 aa9.8□□□□□ -0.84
SND1-206ENST00000468166 GPATCH3Q96I76 525 aa9.8□□□□□ -0.84
SND1-206ENST00000468166 SETDB2Q96T68 719 aa9.8□□□□□ -0.84
SND1-206ENST00000468166 NYXQ9GZU5 481 aa9.8□□□□□ -0.84
SND1-206ENST00000468166 STAP2Q9UGK3 403 aa9.8□□□□□ -0.84
SND1-206ENST00000468166 QSER1Q2KHR3 1735 aa9.79□□□□□ -0.84
SND1-206ENST00000468166 CARMIL3Q8ND23 1372 aa9.79□□□□□ -0.84
SND1-206ENST00000468166 ANKRD18BA2A2Z9 1011 aa9.79□□□□□ -0.84
SND1-206ENST00000468166 EYA2O00167 538 aa9.79□□□□□ -0.84
SND1-206ENST00000468166 HCLS1P14317 486 aaPredicted RBP9.79□□□□□ -0.84
SND1-206ENST00000468166 ITGA6P23229 1130 aa9.79□□□□□ -0.84
SND1-206ENST00000468166 GTF2E1P29083 439 aaPredicted RBP9.79□□□□□ -0.84
SND1-206ENST00000468166 IL15P40933 162 aaPredicted RBP9.79□□□□□ -0.84
SND1-206ENST00000468166 TFCP2Q12800 502 aa9.79□□□□□ -0.84
SND1-206ENST00000468166 TSHZ3Q63HK5 1081 aa9.79□□□□□ -0.84
SND1-206ENST00000468166 NBPF5PQ86XG9 351 aaPredicted RBP9.79□□□□□ -0.84
SND1-206ENST00000468166 ZNF594Q96JF6 807 aaPredicted RBP9.79□□□□□ -0.84
SND1-206ENST00000468166 GREM2Q9H772 168 aa9.79□□□□□ -0.84
SND1-206ENST00000468166 FBXO3Q9UK99 471 aa9.79□□□□□ -0.84
SND1-206ENST00000468166 TTC41PQ6P2S7 1318 aa9.79□□□□□ -0.84
SND1-206ENST00000468166 A0A1B0GUL6 1792 aa9.78□□□□□ -0.84
SND1-206ENST00000468166 RTL9Q8NET4 1388 aa9.78□□□□□ -0.84
SND1-206ENST00000468166 TNRC6CQ9HCJ0 1690 aaKnown RBP9.78□□□□□ -0.84
SND1-206ENST00000468166 CDC45O75419 566 aa9.78□□□□□ -0.84
SND1-206ENST00000468166 SDSP20132 328 aa9.78□□□□□ -0.84
SND1-206ENST00000468166 ERFEQ4G0M1 354 aa9.78□□□□□ -0.84
SND1-206ENST00000468166 CCDC152Q4G0S7 254 aa9.78□□□□□ -0.84
SND1-206ENST00000468166 TNNI3KQ59H18 835 aa9.78□□□□□ -0.84
SND1-206ENST00000468166 ATG9AQ7Z3C6 839 aa9.78□□□□□ -0.84
SND1-206ENST00000468166 UPF2Q9HAU5 1272 aaKnown RBP9.78□□□□□ -0.84
SND1-206ENST00000468166 TFCP2L1Q9NZI6 479 aa9.78□□□□□ -0.84
SND1-206ENST00000468166 FPGT-TNNI3KV9GXZ4 949 aa9.78□□□□□ -0.84
SND1-206ENST00000468166 ZNF609O15014 1411 aa9.78□□□□□ -0.84
SND1-206ENST00000468166 ARAP2Q8WZ64 1704 aa9.78□□□□□ -0.84
SND1-206ENST00000468166 ABCC12Q96J65 1359 aa9.77□□□□□ -0.84
SND1-206ENST00000468166 RIC1Q4ADV7 1423 aa9.77□□□□□ -0.85
SND1-206ENST00000468166 ERC2O15083 957 aa9.77□□□□□ -0.85
SND1-206ENST00000468166 NPHP1O15259 732 aa9.77□□□□□ -0.85
SND1-206ENST00000468166 SF3B2Q13435 895 aaKnown RBP9.77□□□□□ -0.85
SND1-206ENST00000468166 ZNF827Q17R98 1081 aa9.77□□□□□ -0.85
SND1-206ENST00000468166 LRRC24Q50LG9 513 aa9.77□□□□□ -0.85
SND1-206ENST00000468166 CASC1Q6TDU7 716 aa9.77□□□□□ -0.85
SND1-206ENST00000468166 TPTE2Q6XPS3 522 aa9.77□□□□□ -0.85
SND1-206ENST00000468166 AKT1S1Q96B36 256 aa9.77□□□□□ -0.85
SND1-206ENST00000468166 EAF2Q96CJ1 260 aaPredicted RBP9.77□□□□□ -0.85
SND1-206ENST00000468166 ECHDC1Q9NTX5 307 aa9.77□□□□□ -0.85
SND1-206ENST00000468166 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.77□□□□□ -0.85
SND1-206ENST00000468166 TRIM6-TRIM34B2RNG4 842 aa9.76□□□□□ -0.85
SND1-206ENST00000468166 GLRX3O76003 335 aaKnown RBP9.76□□□□□ -0.85
SND1-206ENST00000468166 GYS1P13807 737 aa9.76□□□□□ -0.85
SND1-206ENST00000468166 NFIXQ14938 502 aa9.76□□□□□ -0.85
SND1-206ENST00000468166 LDHAL6AQ6ZMR3 332 aa9.76□□□□□ -0.85
SND1-206ENST00000468166 TBC1D9Q6ZT07 1266 aa9.76□□□□□ -0.85
SND1-206ENST00000468166 FLAD1Q8NFF5 587 aa9.76□□□□□ -0.85
SND1-206ENST00000468166 PI4K2BQ8TCG2 481 aa9.76□□□□□ -0.85
SND1-206ENST00000468166 PUS3Q9BZE2 481 aaKnown RBP9.76□□□□□ -0.85
SND1-206ENST00000468166 CCDC8Q9H0W5 538 aaPredicted RBP9.76□□□□□ -0.85
SND1-206ENST00000468166 GPR108Q9NPR9 543 aa9.76□□□□□ -0.85
SND1-206ENST00000468166 CNNM1Q9NRU3 951 aa9.76□□□□□ -0.85
SND1-206ENST00000468166 TLR7Q9NYK1 1049 aaKnown RBP9.76□□□□□ -0.85
SND1-206ENST00000468166 CEP126Q9P2H0 1117 aa9.76□□□□□ -0.85
SND1-206ENST00000468166 TAF1P21675 1872 aa9.76□□□□□ -0.85
SND1-206ENST00000468166 EIF5BO60841 1220 aaKnown RBP9.75□□□□□ -0.85
SND1-206ENST00000468166 SEC24BO95487 1268 aa9.75□□□□□ -0.85
SND1-206ENST00000468166 IGHMBP2P38935 993 aaKnown RBP9.75□□□□□ -0.85
SND1-206ENST00000468166 ANP32AP39687 249 aaKnown RBP9.75□□□□□ -0.85
SND1-206ENST00000468166 METTL24Q5JXM2 366 aa9.75□□□□□ -0.85
SND1-206ENST00000468166 SLC10A5Q5PT55 438 aa9.75□□□□□ -0.85
SND1-206ENST00000468166 CNBD1Q8NA66 436 aa9.75□□□□□ -0.85
SND1-206ENST00000468166 RILPL2Q969X0 211 aa9.75□□□□□ -0.85
SND1-206ENST00000468166 CDC5LQ99459 802 aaKnown RBP9.75□□□□□ -0.85
SND1-206ENST00000468166 MPHOSPH8Q99549 860 aa9.75□□□□□ -0.85
SND1-206ENST00000468166 DBNLQ9UJU6 430 aaKnown RBP9.75□□□□□ -0.85
SND1-206ENST00000468166 AKAP2Q9Y2D5 859 aa9.75□□□□□ -0.85
SND1-206ENST00000468166 NRXN2Q9P2S2 1712 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms