RNA–Protein interactions for RNA: ENST00000468164.1

C9orf3-212, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-212ENST00000468164 BBOX1O75936 387 aa17.33■□□□□ 0.36
C9orf3-212ENST00000468164 GRAPQ13588 217 aa17.33■□□□□ 0.36
C9orf3-212ENST00000468164 CCDC30Q5VVM6 783 aa17.33■□□□□ 0.36
C9orf3-212ENST00000468164 LDHDQ86WU2 507 aa17.33■□□□□ 0.36
C9orf3-212ENST00000468164 MPNDQ8N594 471 aa17.33■□□□□ 0.36
C9orf3-212ENST00000468164 TSPYL6Q8N831 410 aa17.33■□□□□ 0.36
C9orf3-212ENST00000468164 GRAPLQ8TC17 118 aaPredicted RBP17.33■□□□□ 0.36
C9orf3-212ENST00000468164 LMOD1P29536 600 aaPredicted RBP17.32■□□□□ 0.36
C9orf3-212ENST00000468164 SP8Q8IXZ3 490 aa17.32■□□□□ 0.36
C9orf3-212ENST00000468164 SUPT20HQ8NEM7 779 aa17.32■□□□□ 0.36
C9orf3-212ENST00000468164 COL4A1P02462 1669 aa17.32■□□□□ 0.36
C9orf3-212ENST00000468164 TRPM7Q96QT4 1865 aa17.31■□□□□ 0.36
C9orf3-212ENST00000468164 IRS4O14654 1257 aaPredicted RBP17.31■□□□□ 0.36
C9orf3-212ENST00000468164 WWC1Q8IX03 1113 aa17.31■□□□□ 0.36
C9orf3-212ENST00000468164 JARID2Q92833 1246 aaPredicted RBP17.31■□□□□ 0.36
C9orf3-212ENST00000468164 DDX58O95786 925 aaKnown RBP17.3■□□□□ 0.36
C9orf3-212ENST00000468164 CELF1Q92879 486 aaKnown RBP17.3■□□□□ 0.36
C9orf3-212ENST00000468164 STK31Q9BXU1 1019 aa17.3■□□□□ 0.36
C9orf3-212ENST00000468164 MAP1SQ66K74 1059 aaPredicted RBP17.29■□□□□ 0.36
C9orf3-212ENST00000468164 PNMA8AQ86V59 439 aaPredicted RBP17.29■□□□□ 0.36
C9orf3-212ENST00000468164 CCDC85AQ96PX6 553 aaPredicted RBP17.29■□□□□ 0.36
C9orf3-212ENST00000468164 CHMP4AQ9BY43 222 aa17.29■□□□□ 0.36
C9orf3-212ENST00000468164 DUOX1Q9NRD9 1551 aa17.28■□□□□ 0.36
C9orf3-212ENST00000468164 CCDC27Q2M243 656 aa17.28■□□□□ 0.36
C9orf3-212ENST00000468164 TWISTNBQ3B726 338 aaPredicted RBP17.28■□□□□ 0.36
C9orf3-212ENST00000468164 MKRN1Q9UHC7 482 aaKnown RBP17.28■□□□□ 0.36
C9orf3-212ENST00000468164 NSFL1CQ9UNZ2 370 aaKnown RBP17.28■□□□□ 0.36
C9orf3-212ENST00000468164 MAP3K2Q9Y2U5 619 aa17.28■□□□□ 0.36
C9orf3-212ENST00000468164 EPS15P42566 896 aa17.27■□□□□ 0.36
C9orf3-212ENST00000468164 SCNN1DP51172 638 aa17.27■□□□□ 0.36
C9orf3-212ENST00000468164 TRIM28Q13263 835 aaKnown RBP17.27■□□□□ 0.36
C9orf3-212ENST00000468164 SF3B3Q15393 1217 aaKnown RBP17.27■□□□□ 0.36
C9orf3-212ENST00000468164 TMC4Q7Z404 712 aa17.27■□□□□ 0.36
C9orf3-212ENST00000468164 FAM9BQ8IZU0 186 aa17.27■□□□□ 0.36
C9orf3-212ENST00000468164 JMYQ8N9B5 988 aa17.27■□□□□ 0.36
C9orf3-212ENST00000468164 ZBTB38Q8NAP3 1195 aaPredicted RBP17.27■□□□□ 0.36
C9orf3-212ENST00000468164 CREBZFQ9NS37 354 aa17.27■□□□□ 0.36
C9orf3-212ENST00000468164 CWC25Q9NXE8 425 aaPredicted RBP17.27■□□□□ 0.36
C9orf3-212ENST00000468164 ZNRF3Q9ULT6 936 aa17.27■□□□□ 0.36
C9orf3-212ENST00000468164 POLR2AP24928 1970 aaKnown RBP17.27■□□□□ 0.36
C9orf3-212ENST00000468164 C6orf229H3BNL8 230 aa17.26■□□□□ 0.35
C9orf3-212ENST00000468164 RIMBP2O15034 1052 aa17.26■□□□□ 0.35
C9orf3-212ENST00000468164 RAD17O75943 681 aa17.26■□□□□ 0.35
C9orf3-212ENST00000468164 CXCL9Q07325 125 aa17.26■□□□□ 0.35
C9orf3-212ENST00000468164 CCDC191Q8NCU4 936 aa17.26■□□□□ 0.35
C9orf3-212ENST00000468164 METTL22Q9BUU2 404 aaPredicted RBP17.26■□□□□ 0.35
C9orf3-212ENST00000468164 RTFDC1Q9BY42 306 aaPredicted RBP17.26■□□□□ 0.35
C9orf3-212ENST00000468164 PI4KAP2A4QPH2 592 aa17.25■□□□□ 0.35
C9orf3-212ENST00000468164 KIAA2012Q0VF49 1180 aa17.25■□□□□ 0.35
C9orf3-212ENST00000468164 CIAPIN1Q6FI81 312 aa17.25■□□□□ 0.35
C9orf3-212ENST00000468164 G2E3Q7L622 706 aa17.25■□□□□ 0.35
C9orf3-212ENST00000468164 CNTROBQ8N137 903 aa17.25■□□□□ 0.35
C9orf3-212ENST00000468164 PI4KAP1Q8N8J0 262 aa17.25■□□□□ 0.35
C9orf3-212ENST00000468164 BCL2L13Q9BXK5 485 aa17.25■□□□□ 0.35
C9orf3-212ENST00000468164 VPS33BQ9H267 617 aa17.25■□□□□ 0.35
C9orf3-212ENST00000468164 SEC31BQ9NQW1 1179 aa17.25■□□□□ 0.35
C9orf3-212ENST00000468164 PASKQ96RG2 1323 aa17.24■□□□□ 0.35
C9orf3-212ENST00000468164 ITGBL1O95965 494 aaPredicted RBP17.24■□□□□ 0.35
C9orf3-212ENST00000468164 SLC4A2P04920 1241 aa17.24■□□□□ 0.35
C9orf3-212ENST00000468164 PCCAP05165 728 aaPredicted RBP17.24■□□□□ 0.35
C9orf3-212ENST00000468164 HSP90B1P14625 803 aaKnown RBP17.24■□□□□ 0.35
C9orf3-212ENST00000468164 GMPSP49915 693 aaPredicted RBP17.24■□□□□ 0.35
C9orf3-212ENST00000468164 RPS8P62241 208 aaKnown RBP17.24■□□□□ 0.35
C9orf3-212ENST00000468164 GPSM2P81274 684 aa17.24■□□□□ 0.35
C9orf3-212ENST00000468164 NEXNQ0ZGT2 675 aa17.24■□□□□ 0.35
C9orf3-212ENST00000468164 WASHC4Q2M389 1173 aa17.24■□□□□ 0.35
C9orf3-212ENST00000468164 KSR2Q6VAB6 950 aa17.24■□□□□ 0.35
C9orf3-212ENST00000468164 GPR101Q96P66 508 aaPredicted RBP17.24■□□□□ 0.35
C9orf3-212ENST00000468164 SCN9AQ15858 1988 aa17.24■□□□□ 0.35
C9orf3-212ENST00000468164 FANCIQ9NVI1 1328 aa17.23■□□□□ 0.35
C9orf3-212ENST00000468164 TMEM88BA6NKF7 163 aa17.23■□□□□ 0.35
C9orf3-212ENST00000468164 CCDC152Q4G0S7 254 aa17.23■□□□□ 0.35
C9orf3-212ENST00000468164 DBNDD1Q9H9R9 158 aa17.23■□□□□ 0.35
C9orf3-212ENST00000468164 IL16Q14005 1332 aa17.22■□□□□ 0.35
C9orf3-212ENST00000468164 PDE8AO60658 829 aa17.22■□□□□ 0.35
C9orf3-212ENST00000468164 TNIP1Q15025 636 aa17.22■□□□□ 0.35
C9orf3-212ENST00000468164 CWF19L2Q2TBE0 894 aaKnown RBP17.22■□□□□ 0.35
C9orf3-212ENST00000468164 IFFO2Q5TF58 517 aa17.22■□□□□ 0.35
C9orf3-212ENST00000468164 GPRC5DQ9NZD1 345 aa17.22■□□□□ 0.35
C9orf3-212ENST00000468164 ANKIB1Q9P2G1 1089 aa17.22■□□□□ 0.35
C9orf3-212ENST00000468164 PSME4Q14997 1843 aa17.21■□□□□ 0.35
C9orf3-212ENST00000468164 YDJCA8MPS7 323 aa17.21■□□□□ 0.35
C9orf3-212ENST00000468164 IGKV5-2P06315 115 aa17.21■□□□□ 0.35
C9orf3-212ENST00000468164 HSPA1AP0DMV8 641 aaKnown RBP17.21■□□□□ 0.35
C9orf3-212ENST00000468164 HSPA1BP0DMV9 641 aaKnown RBP17.21■□□□□ 0.35
C9orf3-212ENST00000468164 DOK7Q18PE1 504 aa17.21■□□□□ 0.35
C9orf3-212ENST00000468164 USP50Q70EL3 339 aaPredicted RBP17.21■□□□□ 0.35
C9orf3-212ENST00000468164 ADARB2Q9NS39 739 aaKnown RBP17.21■□□□□ 0.35
C9orf3-212ENST00000468164 POLLQ9UGP5 575 aa17.21■□□□□ 0.35
C9orf3-212ENST00000468164 G3V3G9 751 aa17.2■□□□□ 0.34
C9orf3-212ENST00000468164 EXOSC9Q06265 439 aaKnown RBP17.2■□□□□ 0.34
C9orf3-212ENST00000468164 FMR1Q06787 632 aaKnown RBP eCLIP17.2■□□□□ 0.34
C9orf3-212ENST00000468164 FKBP5Q13451 457 aaPredicted RBP17.2■□□□□ 0.34
C9orf3-212ENST00000468164 DCAF8Q5TAQ9 597 aa17.2■□□□□ 0.34
C9orf3-212ENST00000468164 EYA3Q99504 573 aa17.2■□□□□ 0.34
C9orf3-212ENST00000468164 ABT1Q9ULW3 272 aaKnown RBP17.2■□□□□ 0.34
C9orf3-212ENST00000468164 CNTNAP1P78357 1384 aa17.19■□□□□ 0.34
C9orf3-212ENST00000468164 UFL1O94874 794 aa17.19■□□□□ 0.34
C9orf3-212ENST00000468164 WDR63Q8IWG1 891 aa17.19■□□□□ 0.34
C9orf3-212ENST00000468164 TBC1D16Q8TBP0 767 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms