RNA–Protein interactions for RNA: ENST00000468105.5

RPP40-204, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 2

Gene RPP40, Length 632 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-204ENST00000468105 NUDCQ9Y266 331 aa17.99■□□□□ 0.47
RPP40-204ENST00000468105 KIF6Q6ZMV9 814 aa17.98■□□□□ 0.47
RPP40-204ENST00000468105 HCLS1P14317 486 aaPredicted RBP17.97■□□□□ 0.47
RPP40-204ENST00000468105 BRPF1P55201 1214 aaPredicted RBP17.97■□□□□ 0.47
RPP40-204ENST00000468105 ZBTB12Q9Y330 459 aaPredicted RBP17.97■□□□□ 0.47
RPP40-204ENST00000468105 FAM155AB1AL88 458 aaPredicted RBP17.96■□□□□ 0.47
RPP40-204ENST00000468105 KIAA2012Q0VF49 1180 aa17.96■□□□□ 0.47
RPP40-204ENST00000468105 DGKZQ13574 1117 aa17.96■□□□□ 0.47
RPP40-204ENST00000468105 GRIPAP1Q4V328 841 aa17.96■□□□□ 0.47
RPP40-204ENST00000468105 USP48Q86UV5 1035 aa17.96■□□□□ 0.47
RPP40-204ENST00000468105 HHIPL1Q96JK4 782 aa17.96■□□□□ 0.47
RPP40-204ENST00000468105 CFAP44Q96MT7 982 aa17.96■□□□□ 0.47
RPP40-204ENST00000468105 KCNQ5Q9NR82 932 aa17.96■□□□□ 0.47
RPP40-204ENST00000468105 POLR2AP24928 1970 aaKnown RBP17.96■□□□□ 0.47
RPP40-204ENST00000468105 SP8Q8IXZ3 490 aa17.95■□□□□ 0.46
RPP40-204ENST00000468105 NLRP3Q96P20 1036 aa17.95■□□□□ 0.46
RPP40-204ENST00000468105 CNOT7Q9UIV1 285 aaKnown RBP17.95■□□□□ 0.46
RPP40-204ENST00000468105 ANKRD36CQ5JPF3 1778 aa17.94■□□□□ 0.46
RPP40-204ENST00000468105 PDE4DIPQ5VU43 2346 aa17.94■□□□□ 0.46
RPP40-204ENST00000468105 SAMD7Q7Z3H4 446 aa17.94■□□□□ 0.46
RPP40-204ENST00000468105 UTP14AQ9BVJ6 771 aaKnown RBP17.94■□□□□ 0.46
RPP40-204ENST00000468105 DPP8Q6V1X1 898 aaPredicted RBP17.93■□□□□ 0.46
RPP40-204ENST00000468105 PPP1R42Q7Z4L9 355 aa17.93■□□□□ 0.46
RPP40-204ENST00000468105 MPNDQ8N594 471 aa17.93■□□□□ 0.46
RPP40-204ENST00000468105 VPS33BQ9H267 617 aa17.93■□□□□ 0.46
RPP40-204ENST00000468105 DDX10Q13206 875 aaKnown RBP17.92■□□□□ 0.46
RPP40-204ENST00000468105 NFE2L2Q16236 605 aa17.92■□□□□ 0.46
RPP40-204ENST00000468105 CDC37L1Q7L3B6 337 aa17.92■□□□□ 0.46
RPP40-204ENST00000468105 NLRP10Q86W26 655 aa17.92■□□□□ 0.46
RPP40-204ENST00000468105 MICALL2Q8IY33 904 aa17.92■□□□□ 0.46
RPP40-204ENST00000468105 PNISRQ8TF01 805 aaKnown RBP17.92■□□□□ 0.46
RPP40-204ENST00000468105 ZC3H15Q8WU90 426 aaKnown RBP17.92■□□□□ 0.46
RPP40-204ENST00000468105 ASTN2O75129 1339 aaPredicted RBP17.92■□□□□ 0.46
RPP40-204ENST00000468105 LRRC37AA6NMS7 1700 aa17.92■□□□□ 0.46
RPP40-204ENST00000468105 ADM5C9JUS6 153 aa17.91■□□□□ 0.46
RPP40-204ENST00000468105 CA12O43570 354 aa17.91■□□□□ 0.46
RPP40-204ENST00000468105 EIF2S2P20042 333 aaKnown RBP17.91■□□□□ 0.46
RPP40-204ENST00000468105 HUNKP57058 714 aa17.91■□□□□ 0.46
RPP40-204ENST00000468105 PARP10Q53GL7 1025 aa17.91■□□□□ 0.46
RPP40-204ENST00000468105 BCL2L13Q9BXK5 485 aa17.91■□□□□ 0.46
RPP40-204ENST00000468105 DDX60Q8IY21 1712 aaKnown RBP17.9■□□□□ 0.46
RPP40-204ENST00000468105 PSMD14O00487 310 aa17.9■□□□□ 0.46
RPP40-204ENST00000468105 BBOX1O75936 387 aa17.9■□□□□ 0.46
RPP40-204ENST00000468105 SOX10P56693 466 aa17.9■□□□□ 0.46
RPP40-204ENST00000468105 KRT24Q2M2I5 525 aa17.9■□□□□ 0.46
RPP40-204ENST00000468105 TBC1D10BQ4KMP7 808 aaPredicted RBP17.9■□□□□ 0.46
RPP40-204ENST00000468105 NECTIN2Q92692 538 aa17.9■□□□□ 0.46
RPP40-204ENST00000468105 RTL9Q8NET4 1388 aa17.9■□□□□ 0.46
RPP40-204ENST00000468105 KIF23Q02241 960 aaPredicted RBP17.89■□□□□ 0.45
RPP40-204ENST00000468105 GRAPQ13588 217 aa17.89■□□□□ 0.45
RPP40-204ENST00000468105 COPS6Q7L5N1 327 aa17.89■□□□□ 0.45
RPP40-204ENST00000468105 SUPT20HQ8NEM7 779 aa17.89■□□□□ 0.45
RPP40-204ENST00000468105 GRAPLQ8TC17 118 aaPredicted RBP17.89■□□□□ 0.45
RPP40-204ENST00000468105 CELF1Q92879 486 aaKnown RBP17.89■□□□□ 0.45
RPP40-204ENST00000468105 DBNDD1Q9H9R9 158 aa17.89■□□□□ 0.45
RPP40-204ENST00000468105 SCN9AQ15858 1988 aa17.89■□□□□ 0.45
RPP40-204ENST00000468105 ERBB4Q15303 1308 aa17.89■□□□□ 0.45
RPP40-204ENST00000468105 CDHR2Q9BYE9 1310 aa17.89■□□□□ 0.45
RPP40-204ENST00000468105 NOGQ13253 232 aa17.88■□□□□ 0.45
RPP40-204ENST00000468105 XAGE3Q8WTP9 111 aa17.88■□□□□ 0.45
RPP40-204ENST00000468105 POLLQ9UGP5 575 aa17.88■□□□□ 0.45
RPP40-204ENST00000468105 AIMP1Q12904 312 aaKnown RBP17.87■□□□□ 0.45
RPP40-204ENST00000468105 TNIP1Q15025 636 aa17.87■□□□□ 0.45
RPP40-204ENST00000468105 RGMBQ6NW40 437 aa17.87■□□□□ 0.45
RPP40-204ENST00000468105 RNF186Q9NXI6 227 aa17.87■□□□□ 0.45
RPP40-204ENST00000468105 RIMBP2O15034 1052 aa17.86■□□□□ 0.45
RPP40-204ENST00000468105 GPSM2P81274 684 aa17.86■□□□□ 0.45
RPP40-204ENST00000468105 TCIRG1Q13488 830 aa17.86■□□□□ 0.45
RPP40-204ENST00000468105 RBM26Q5T8P6 1007 aaKnown RBP17.86■□□□□ 0.45
RPP40-204ENST00000468105 TSPYL4Q9UJ04 414 aa17.86■□□□□ 0.45
RPP40-204ENST00000468105 TRPA1O75762 1119 aa17.85■□□□□ 0.45
RPP40-204ENST00000468105 DOK7Q18PE1 504 aa17.85■□□□□ 0.45
RPP40-204ENST00000468105 DIEXFQ68CQ4 756 aaKnown RBP17.85■□□□□ 0.45
RPP40-204ENST00000468105 DDX46Q7L014 1031 aaKnown RBP17.85■□□□□ 0.45
RPP40-204ENST00000468105 KRT26Q7Z3Y9 468 aa17.85■□□□□ 0.45
RPP40-204ENST00000468105 CSRNP1Q96S65 589 aa17.85■□□□□ 0.45
RPP40-204ENST00000468105 TRMT112Q9UI30 125 aaKnown RBP17.85■□□□□ 0.45
RPP40-204ENST00000468105 H7C1D1 291 aa17.84■□□□□ 0.45
RPP40-204ENST00000468105 DPF2Q92785 391 aa17.84■□□□□ 0.45
RPP40-204ENST00000468105 GBA2Q9HCG7 927 aaPredicted RBP17.84■□□□□ 0.45
RPP40-204ENST00000468105 SH3TC1Q8TE82 1336 aa17.83■□□□□ 0.44
RPP40-204ENST00000468105 PCDH10Q9P2E7 1040 aa17.83■□□□□ 0.44
RPP40-204ENST00000468105 SCAF8Q9UPN6 1271 aaKnown RBP17.83■□□□□ 0.44
RPP40-204ENST00000468105 WASHC4Q2M389 1173 aa17.82■□□□□ 0.44
RPP40-204ENST00000468105 FAM89AQ96GI7 184 aa17.82■□□□□ 0.44
RPP40-204ENST00000468105 TMX4Q9H1E5 349 aaPredicted RBP17.82■□□□□ 0.44
RPP40-204ENST00000468105 NSFL1CQ9UNZ2 370 aaKnown RBP17.82■□□□□ 0.44
RPP40-204ENST00000468105 ECE2O60344 883 aa17.81■□□□□ 0.44
RPP40-204ENST00000468105 SLC10A3P09131 477 aa17.81■□□□□ 0.44
RPP40-204ENST00000468105 ZNF157P51786 506 aaPredicted RBP17.81■□□□□ 0.44
RPP40-204ENST00000468105 RTL5Q5HYW3 569 aaPredicted RBP17.81■□□□□ 0.44
RPP40-204ENST00000468105 MOB2Q70IA6 237 aa17.81■□□□□ 0.44
RPP40-204ENST00000468105 WTIPA6NIX2 430 aaPredicted RBP17.8■□□□□ 0.44
RPP40-204ENST00000468105 ATP5J2-PTCD1G3V325 749 aa17.8■□□□□ 0.44
RPP40-204ENST00000468105 SF3B3Q15393 1217 aaKnown RBP17.8■□□□□ 0.44
RPP40-204ENST00000468105 TBC1D16Q8TBP0 767 aa17.8■□□□□ 0.44
RPP40-204ENST00000468105 ISCA1Q9BUE6 129 aa17.8■□□□□ 0.44
RPP40-204ENST00000468105 SAGE1Q9NXZ1 904 aa17.8■□□□□ 0.44
RPP40-204ENST00000468105 CHPF2Q9P2E5 772 aa17.8■□□□□ 0.44
RPP40-204ENST00000468105 AKAP11Q9UKA4 1901 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms