RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 MPNDQ8N594 471 aa22.49■■□□□ 1.19
TRIM56-203ENST00000467847 ZNF428Q96B54 188 aa22.49■■□□□ 1.19
TRIM56-203ENST00000467847 ZNRF3Q9ULT6 936 aa22.49■■□□□ 1.19
TRIM56-203ENST00000467847 RASSF10A6NK89 507 aa22.48■■□□□ 1.19
TRIM56-203ENST00000467847 HOXB7P09629 217 aa22.48■■□□□ 1.19
TRIM56-203ENST00000467847 MAP2K1Q02750 393 aaPredicted RBP22.48■■□□□ 1.19
TRIM56-203ENST00000467847 GRAPQ13588 217 aa22.48■■□□□ 1.19
TRIM56-203ENST00000467847 PLBD2Q8NHP8 589 aa22.48■■□□□ 1.19
TRIM56-203ENST00000467847 GRAPLQ8TC17 118 aaPredicted RBP22.48■■□□□ 1.19
TRIM56-203ENST00000467847 DBF4Q9UBU7 674 aaPredicted RBP22.48■■□□□ 1.19
TRIM56-203ENST00000467847 ABT1Q9ULW3 272 aaKnown RBP22.48■■□□□ 1.19
TRIM56-203ENST00000467847 DDX60Q8IY21 1712 aaKnown RBP22.48■■□□□ 1.19
TRIM56-203ENST00000467847 HSPA8P11142 646 aaKnown RBP22.47■■□□□ 1.19
TRIM56-203ENST00000467847 ANKRD13DQ6ZTN6 518 aa22.47■■□□□ 1.19
TRIM56-203ENST00000467847 TRPM7Q96QT4 1865 aa22.46■■□□□ 1.19
TRIM56-203ENST00000467847 CXCL9Q07325 125 aa22.46■■□□□ 1.19
TRIM56-203ENST00000467847 CFAP44Q96MT7 982 aa22.46■■□□□ 1.19
TRIM56-203ENST00000467847 GPRC5DQ9NZD1 345 aa22.46■■□□□ 1.19
TRIM56-203ENST00000467847 KIAA2012Q0VF49 1180 aa22.45■■□□□ 1.18
TRIM56-203ENST00000467847 BEGAINQ9BUH8 593 aa22.45■■□□□ 1.18
TRIM56-203ENST00000467847 ADARB2Q9NS39 739 aaKnown RBP22.45■■□□□ 1.18
TRIM56-203ENST00000467847 LRRC37AA6NMS7 1700 aa22.45■■□□□ 1.18
TRIM56-203ENST00000467847 ATP5J2-PTCD1G3V325 749 aa22.44■■□□□ 1.18
TRIM56-203ENST00000467847 DUSP27Q5VZP5 1158 aa22.44■■□□□ 1.18
TRIM56-203ENST00000467847 TMC4Q7Z404 712 aa22.44■■□□□ 1.18
TRIM56-203ENST00000467847 WDR33Q9C0J8 1336 aaKnown RBP22.44■■□□□ 1.18
TRIM56-203ENST00000467847 HYPKQ9NX55 129 aa22.44■■□□□ 1.18
TRIM56-203ENST00000467847 CCDC85CA6NKD9 419 aa22.43■■□□□ 1.18
TRIM56-203ENST00000467847 GMPSP49915 693 aaPredicted RBP22.43■■□□□ 1.18
TRIM56-203ENST00000467847 FMR1Q06787 632 aaKnown RBP eCLIP22.43■■□□□ 1.182e-7■■■□□ 17
TRIM56-203ENST00000467847 CIAPIN1Q6FI81 312 aa22.43■■□□□ 1.18
TRIM56-203ENST00000467847 PAXIP1Q6ZW49 1069 aaPredicted RBP22.43■■□□□ 1.18
TRIM56-203ENST00000467847 FAM89AQ96GI7 184 aa22.43■■□□□ 1.18
TRIM56-203ENST00000467847 ISCA1Q9BUE6 129 aa22.43■■□□□ 1.18
TRIM56-203ENST00000467847 MBIPQ9NS73 344 aa22.43■■□□□ 1.18
TRIM56-203ENST00000467847 TRAF5O00463 557 aa22.42■■□□□ 1.18
TRIM56-203ENST00000467847 RAD17O75943 681 aa22.42■■□□□ 1.18
TRIM56-203ENST00000467847 MLLT1Q03111 559 aaPredicted RBP22.42■■□□□ 1.18
TRIM56-203ENST00000467847 PRKRIP1Q9H875 184 aaPredicted RBP22.42■■□□□ 1.18
TRIM56-203ENST00000467847 DUOX1Q9NRD9 1551 aa22.42■■□□□ 1.18
TRIM56-203ENST00000467847 TNIP1Q15025 636 aa22.41■■□□□ 1.18
TRIM56-203ENST00000467847 BCL2L13Q9BXK5 485 aa22.41■■□□□ 1.18
TRIM56-203ENST00000467847 CDHR2Q9BYE9 1310 aa22.4■■□□□ 1.18
TRIM56-203ENST00000467847 RTL5Q5HYW3 569 aaPredicted RBP22.4■■□□□ 1.18
TRIM56-203ENST00000467847 GRM1Q13255 1194 aa22.39■■□□□ 1.17
TRIM56-203ENST00000467847 SF3B3Q15393 1217 aaKnown RBP22.39■■□□□ 1.17
TRIM56-203ENST00000467847 APAF1O14727 1248 aa22.38■■□□□ 1.17
TRIM56-203ENST00000467847 ZNF853P0CG23 659 aa22.38■■□□□ 1.17
TRIM56-203ENST00000467847 ECE1P42892 770 aa22.38■■□□□ 1.17
TRIM56-203ENST00000467847 CST9Q5W186 159 aa22.38■■□□□ 1.17
TRIM56-203ENST00000467847 CELF1Q92879 486 aaKnown RBP22.38■■□□□ 1.17
TRIM56-203ENST00000467847 IFT57Q9NWB7 429 aa22.38■■□□□ 1.17
TRIM56-203ENST00000467847 YDJCA8MPS7 323 aa22.37■■□□□ 1.17
TRIM56-203ENST00000467847 CALD1Q05682 793 aaKnown RBP22.37■■□□□ 1.17
TRIM56-203ENST00000467847 GOLGA2Q08379 1002 aa22.37■■□□□ 1.17
TRIM56-203ENST00000467847 TRIM28Q13263 835 aaKnown RBP22.37■■□□□ 1.17
TRIM56-203ENST00000467847 RIC3Q7Z5B4 369 aa22.37■■□□□ 1.17
TRIM56-203ENST00000467847 CAPNS2Q96L46 248 aa22.37■■□□□ 1.17
TRIM56-203ENST00000467847 NSFL1CQ9UNZ2 370 aaKnown RBP22.37■■□□□ 1.17
TRIM56-203ENST00000467847 COL4A1P02462 1669 aa22.36■■□□□ 1.17
TRIM56-203ENST00000467847 THSD7BQ9C0I4 1608 aa22.36■■□□□ 1.17
TRIM56-203ENST00000467847 IRS4O14654 1257 aaPredicted RBP22.36■■□□□ 1.17
TRIM56-203ENST00000467847 GNAI1P63096 354 aa22.36■■□□□ 1.17
TRIM56-203ENST00000467847 WASHC4Q2M389 1173 aa22.36■■□□□ 1.17
TRIM56-203ENST00000467847 ELL2O00472 640 aaPredicted RBP22.35■■□□□ 1.17
TRIM56-203ENST00000467847 CYP4F22Q6NT55 531 aa22.35■■□□□ 1.17
TRIM56-203ENST00000467847 PHAXQ9H814 394 aaKnown RBP22.35■■□□□ 1.17
TRIM56-203ENST00000467847 CNOT7Q9UIV1 285 aaKnown RBP22.35■■□□□ 1.17
TRIM56-203ENST00000467847 TLL2Q9Y6L7 1015 aa22.35■■□□□ 1.17
TRIM56-203ENST00000467847 C6orf229H3BNL8 230 aa22.34■■□□□ 1.17
TRIM56-203ENST00000467847 CELF2O95319 508 aaKnown RBP22.34■■□□□ 1.17
TRIM56-203ENST00000467847 GPSM2P81274 684 aa22.34■■□□□ 1.17
TRIM56-203ENST00000467847 TRPM4Q8TD43 1214 aa22.34■■□□□ 1.17
TRIM56-203ENST00000467847 ZC3H15Q8WU90 426 aaKnown RBP22.34■■□□□ 1.17
TRIM56-203ENST00000467847 GPR101Q96P66 508 aaPredicted RBP22.34■■□□□ 1.17
TRIM56-203ENST00000467847 GLIS2Q9BZE0 524 aaPredicted RBP22.34■■□□□ 1.17
TRIM56-203ENST00000467847 DBNDD1Q9H9R9 158 aa22.34■■□□□ 1.17
TRIM56-203ENST00000467847 PGAP2Q9UHJ9 254 aa22.34■■□□□ 1.17
TRIM56-203ENST00000467847 H7C1D1 291 aa22.33■■□□□ 1.17
TRIM56-203ENST00000467847 RIMBP2O15034 1052 aa22.33■■□□□ 1.17
TRIM56-203ENST00000467847 HIRAP54198 1017 aaPredicted RBP22.33■■□□□ 1.17
TRIM56-203ENST00000467847 MICALL2Q8IY33 904 aa22.33■■□□□ 1.17
TRIM56-203ENST00000467847 ZBTB38Q8NAP3 1195 aaPredicted RBP22.33■■□□□ 1.17
TRIM56-203ENST00000467847 POLLQ9UGP5 575 aa22.33■■□□□ 1.17
TRIM56-203ENST00000467847 SHTN1A0MZ66 631 aa22.32■■□□□ 1.16
TRIM56-203ENST00000467847 PSMD14O00487 310 aa22.32■■□□□ 1.16
TRIM56-203ENST00000467847 RPS8P62241 208 aaKnown RBP22.32■■□□□ 1.16
TRIM56-203ENST00000467847 MYD88Q99836 296 aa22.32■■□□□ 1.16
TRIM56-203ENST00000467847 PCDH10Q9P2E7 1040 aa22.32■■□□□ 1.16
TRIM56-203ENST00000467847 ZBTB12Q9Y330 459 aaPredicted RBP22.32■■□□□ 1.16
TRIM56-203ENST00000467847 HSP90B1P14625 803 aaKnown RBP22.31■■□□□ 1.16
TRIM56-203ENST00000467847 EYA3Q99504 573 aa22.31■■□□□ 1.16
TRIM56-203ENST00000467847 ECE2O60344 883 aa22.3■■□□□ 1.16
TRIM56-203ENST00000467847 CDC37L1Q7L3B6 337 aa22.3■■□□□ 1.16
TRIM56-203ENST00000467847 SAPCD2Q86UD0 394 aa22.3■■□□□ 1.16
TRIM56-203ENST00000467847 C8orf58Q8NAV2 365 aa22.3■■□□□ 1.16
TRIM56-203ENST00000467847 TBC1D16Q8TBP0 767 aa22.3■■□□□ 1.16
TRIM56-203ENST00000467847 DPF2Q92785 391 aa22.3■■□□□ 1.16
TRIM56-203ENST00000467847 ZNF408Q9H9D4 720 aa22.3■■□□□ 1.16
TRIM56-203ENST00000467847 RGS19P49795 217 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 307.5 ms