RNA–Protein interactions for RNA: ENST00000467642.5

ZC3HC1-204, Transcript of zinc finger C3HC-type containing 1, humanhuman

TSL 2

Gene ZC3HC1, Length 1,934 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1-204ENST00000467642 PPEF1O14829 653 aaPredicted RBP12.56□□□□□ -0.4
ZC3HC1-204ENST00000467642 IL27Q8NEV9 243 aa12.56□□□□□ -0.4
ZC3HC1-204ENST00000467642 GPBP1L1Q9HC44 474 aaPredicted RBP12.56□□□□□ -0.4
ZC3HC1-204ENST00000467642 LINS1Q8NG48 757 aa12.56□□□□□ -0.4
ZC3HC1-204ENST00000467642 ABCC4O15439 1325 aa12.56□□□□□ -0.4
ZC3HC1-204ENST00000467642 SBF1O95248 1867 aa12.55□□□□□ -0.4
ZC3HC1-204ENST00000467642 BBOX1O75936 387 aa12.55□□□□□ -0.4
ZC3HC1-204ENST00000467642 PRELPP51888 382 aa12.55□□□□□ -0.4
ZC3HC1-204ENST00000467642 SF3B3Q15393 1217 aaKnown RBP12.55□□□□□ -0.4
ZC3HC1-204ENST00000467642 CC2D2BQ6DHV5 1058 aa12.55□□□□□ -0.4
ZC3HC1-204ENST00000467642 SLC4A10Q6U841 1118 aa12.55□□□□□ -0.4
ZC3HC1-204ENST00000467642 MRPL50Q8N5N7 158 aaKnown RBP12.55□□□□□ -0.4
ZC3HC1-204ENST00000467642 SSH1Q8WYL5 1049 aa12.55□□□□□ -0.4
ZC3HC1-204ENST00000467642 BCL2L13Q9BXK5 485 aa12.55□□□□□ -0.4
ZC3HC1-204ENST00000467642 FER1L6Q2WGJ9 1857 aa12.55□□□□□ -0.4
ZC3HC1-204ENST00000467642 DDX60Q8IY21 1712 aaKnown RBP12.55□□□□□ -0.4
ZC3HC1-204ENST00000467642 LAMB2P55268 1798 aa12.55□□□□□ -0.4
ZC3HC1-204ENST00000467642 PDE8AO60658 829 aa12.54□□□□□ -0.4
ZC3HC1-204ENST00000467642 CT47B1P0C2W7 299 aaPredicted RBP12.54□□□□□ -0.4
ZC3HC1-204ENST00000467642 GCKRQ14397 625 aa12.54□□□□□ -0.4
ZC3HC1-204ENST00000467642 BACH2Q9BYV9 841 aa12.54□□□□□ -0.4
ZC3HC1-204ENST00000467642 LTBP3Q9NS15 1303 aa12.54□□□□□ -0.4
ZC3HC1-204ENST00000467642 CCDC88AQ3V6T2 1871 aa12.54□□□□□ -0.4
ZC3HC1-204ENST00000467642 FKBP4Q02790 459 aaKnown RBP eCLIP12.54□□□□□ -0.4
ZC3HC1-204ENST00000467642 GRAPQ13588 217 aa12.54□□□□□ -0.4
ZC3HC1-204ENST00000467642 ALDH1L2Q3SY69 923 aa12.54□□□□□ -0.4
ZC3HC1-204ENST00000467642 UBE3BQ7Z3V4 1068 aa12.54□□□□□ -0.4
ZC3HC1-204ENST00000467642 GRAPLQ8TC17 118 aaPredicted RBP12.54□□□□□ -0.4
ZC3HC1-204ENST00000467642 SMC4Q9NTJ3 1288 aa12.54□□□□□ -0.4
ZC3HC1-204ENST00000467642 ATP6V0A2Q9Y487 856 aa12.54□□□□□ -0.4
ZC3HC1-204ENST00000467642 CCDC152Q4G0S7 254 aa12.53□□□□□ -0.4
ZC3HC1-204ENST00000467642 GRIPAP1Q4V328 841 aa12.53□□□□□ -0.4
ZC3HC1-204ENST00000467642 BEND3Q5T5X7 828 aa12.53□□□□□ -0.4
ZC3HC1-204ENST00000467642 CCDC85AQ96PX6 553 aaPredicted RBP12.53□□□□□ -0.4
ZC3HC1-204ENST00000467642 ZNF277Q9NRM2 450 aaPredicted RBP12.53□□□□□ -0.4
ZC3HC1-204ENST00000467642 CDHR2Q9BYE9 1310 aa12.53□□□□□ -0.4
ZC3HC1-204ENST00000467642 H7C1W4 665 aa12.52□□□□□ -0.4
ZC3HC1-204ENST00000467642 PDE4AP27815 886 aa12.52□□□□□ -0.4
ZC3HC1-204ENST00000467642 RRP1P56182 461 aaKnown RBP12.52□□□□□ -0.41
ZC3HC1-204ENST00000467642 SLC51AQ86UW1 340 aa12.52□□□□□ -0.41
ZC3HC1-204ENST00000467642 SP8Q8IXZ3 490 aa12.52□□□□□ -0.41
ZC3HC1-204ENST00000467642 CELF1Q92879 486 aaKnown RBP12.52□□□□□ -0.41
ZC3HC1-204ENST00000467642 DDRGK1Q96HY6 314 aa12.52□□□□□ -0.41
ZC3HC1-204ENST00000467642 PTPRCP08575 1304 aa12.52□□□□□ -0.41
ZC3HC1-204ENST00000467642 ZC3H4Q9UPT8 1303 aaKnown RBP12.52□□□□□ -0.41
ZC3HC1-204ENST00000467642 TAF1P21675 1872 aa12.51□□□□□ -0.41
ZC3HC1-204ENST00000467642 CTSWP56202 376 aa12.51□□□□□ -0.41
ZC3HC1-204ENST00000467642 RPS8P62241 208 aaKnown RBP12.51□□□□□ -0.41
ZC3HC1-204ENST00000467642 DPY19L2Q6NUT2 758 aa12.51□□□□□ -0.41
ZC3HC1-204ENST00000467642 TMC4Q7Z404 712 aa12.51□□□□□ -0.41
ZC3HC1-204ENST00000467642 PSMD1Q99460 953 aa12.51□□□□□ -0.41
ZC3HC1-204ENST00000467642 SRCIN1Q9C0H9 1055 aa12.51□□□□□ -0.41
ZC3HC1-204ENST00000467642 SEC31BQ9NQW1 1179 aa12.51□□□□□ -0.41
ZC3HC1-204ENST00000467642 KDM2BQ8NHM5 1336 aa12.51□□□□□ -0.41
ZC3HC1-204ENST00000467642 C9orf78Q9NZ63 289 aaPredicted RBP12.5□□□□□ -0.41
ZC3HC1-204ENST00000467642 IARSP41252 1262 aaKnown RBP12.5□□□□□ -0.41
ZC3HC1-204ENST00000467642 DPP8Q6V1X1 898 aaPredicted RBP12.5□□□□□ -0.41
ZC3HC1-204ENST00000467642 MPNDQ8N594 471 aa12.5□□□□□ -0.41
ZC3HC1-204ENST00000467642 TTLL11Q8NHH1 800 aa12.5□□□□□ -0.41
ZC3HC1-204ENST00000467642 UBE2Q2Q8WVN8 375 aa12.5□□□□□ -0.41
ZC3HC1-204ENST00000467642 GLTPD2A6NH11 291 aa12.49□□□□□ -0.41
ZC3HC1-204ENST00000467642 ALDH1L1O75891 902 aa12.49□□□□□ -0.41
ZC3HC1-204ENST00000467642 RARSP54136 660 aaKnown RBP12.49□□□□□ -0.41
ZC3HC1-204ENST00000467642 JDP2Q8WYK2 163 aa12.49□□□□□ -0.41
ZC3HC1-204ENST00000467642 NSFL1CQ9UNZ2 370 aaKnown RBP12.49□□□□□ -0.41
ZC3HC1-204ENST00000467642 GRM8O00222 908 aa12.49□□□□□ -0.41
ZC3HC1-204ENST00000467642 CASP7P55210 303 aa12.49□□□□□ -0.41
ZC3HC1-204ENST00000467642 ANKRD18AQ8IVF6 992 aa12.49□□□□□ -0.41
ZC3HC1-204ENST00000467642 SUPT20HQ8NEM7 779 aa12.49□□□□□ -0.41
ZC3HC1-204ENST00000467642 GREM2Q9H772 168 aa12.49□□□□□ -0.41
ZC3HC1-204ENST00000467642 NMRK2Q9NPI5 230 aa12.49□□□□□ -0.41
ZC3HC1-204ENST00000467642 NOB1Q9ULX3 412 aaKnown RBP12.49□□□□□ -0.41
ZC3HC1-204ENST00000467642 DICER1Q9UPY3 1922 aaKnown RBP12.48□□□□□ -0.41
ZC3HC1-204ENST00000467642 SNED1Q8TER0 1413 aa12.48□□□□□ -0.41
ZC3HC1-204ENST00000467642 LARGE2Q8N3Y3 721 aa12.48□□□□□ -0.41
ZC3HC1-204ENST00000467642 CDC5LQ99459 802 aaKnown RBP12.48□□□□□ -0.41
ZC3HC1-204ENST00000467642 PLA2G12BQ9BX93 195 aa12.48□□□□□ -0.41
ZC3HC1-204ENST00000467642 RRAGCQ9HB90 399 aa12.48□□□□□ -0.41
ZC3HC1-204ENST00000467642 TIAM2Q8IVF5 1701 aa12.47□□□□□ -0.41
ZC3HC1-204ENST00000467642 PPIP5K2O43314 1243 aa12.47□□□□□ -0.41
ZC3HC1-204ENST00000467642 BRPF1P55201 1214 aaPredicted RBP12.47□□□□□ -0.41
ZC3HC1-204ENST00000467642 GSE1Q14687 1217 aa12.47□□□□□ -0.41
ZC3HC1-204ENST00000467642 AOC3Q16853 763 aa12.47□□□□□ -0.41
ZC3HC1-204ENST00000467642 RTFDC1Q9BY42 306 aaPredicted RBP12.47□□□□□ -0.41
ZC3HC1-204ENST00000467642 ANKIB1Q9P2G1 1089 aa12.47□□□□□ -0.41
ZC3HC1-204ENST00000467642 CHMP3Q9Y3E7 222 aa12.47□□□□□ -0.41
ZC3HC1-204ENST00000467642 MYH3P11055 1940 aa12.46□□□□□ -0.41
ZC3HC1-204ENST00000467642 C6orf229H3BNL8 230 aa12.46□□□□□ -0.42
ZC3HC1-204ENST00000467642 CSF1RP07333 972 aa12.46□□□□□ -0.42
ZC3HC1-204ENST00000467642 ITGA6P23229 1130 aa12.46□□□□□ -0.42
ZC3HC1-204ENST00000467642 GPSM2P81274 684 aa12.46□□□□□ -0.42
ZC3HC1-204ENST00000467642 VPS33BQ9H267 617 aa12.46□□□□□ -0.42
ZC3HC1-204ENST00000467642 RCAN3Q9UKA8 241 aa12.46□□□□□ -0.42
ZC3HC1-204ENST00000467642 KIF16BQ96L93 1317 aa12.45□□□□□ -0.42
ZC3HC1-204ENST00000467642 COL4A1P02462 1669 aa12.45□□□□□ -0.42
ZC3HC1-204ENST00000467642 KIF3CO14782 793 aa12.45□□□□□ -0.42
ZC3HC1-204ENST00000467642 DDNO94850 711 aaPredicted RBP12.45□□□□□ -0.42
ZC3HC1-204ENST00000467642 NBPF7P0C2Y1 421 aaPredicted RBP12.45□□□□□ -0.42
ZC3HC1-204ENST00000467642 IGHMBP2P38935 993 aaKnown RBP12.45□□□□□ -0.42
ZC3HC1-204ENST00000467642 FOXO4P98177 505 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms